RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 DRP2Q13474 957 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 DHX34Q14147 1143 aaKnown RBP12.26□□□□□ -0.45
GGA3-205ENST00000578348 KIF22Q14807 665 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 PLCB4Q15147 1175 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 GKAP1Q5VSY0 366 aaPredicted RBP12.26□□□□□ -0.45
GGA3-205ENST00000578348 DENND2CQ68D51 928 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 MIS18BP1Q6P0N0 1132 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 RHOT2Q8IXI1 618 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 KRT35Q92764 455 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 CEP170P1Q96L14 293 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 SELENOSQ9BQE4 189 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 SH2D3AQ9BRG2 576 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 PABPC3Q9H361 631 aaKnown RBP12.26□□□□□ -0.45
GGA3-205ENST00000578348 PCIF1Q9H4Z3 704 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 CNOT10Q9H9A5 744 aaKnown RBP12.26□□□□□ -0.45
GGA3-205ENST00000578348 SPON1Q9HCB6 807 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 HSPBP1Q9NZL4 362 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 RASAL2Q9UJF2 1139 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 SYNGAP1Q96PV0 1343 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 C5orf60A6NFR6 353 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 FAM187AA6NFU0 413 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 TISP43B9A030 160 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 DNM1LO00429 736 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 KIAA0391O15091 583 aaKnown RBP12.26□□□□□ -0.45
GGA3-205ENST00000578348 FTLP02792 175 aaPredicted RBP12.26□□□□□ -0.45
GGA3-205ENST00000578348 BYSLQ13895 437 aaKnown RBP12.26□□□□□ -0.45
GGA3-205ENST00000578348 STXBP2Q15833 593 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 SPDYCQ5MJ68 293 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 TREML2Q5T2D2 321 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 ZDHHC24Q6UX98 284 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 ABHD15Q6UXT9 468 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 ARMC9Q7Z3E5 817 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 RIOX2Q8IUF8 465 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 MAP4K3Q8IVH8 894 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 TMEM161BQ8NDZ6 487 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 MCPH1Q8NEM0 835 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 LMO3Q8TAP4 145 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 UPF1Q92900 1129 aaKnown RBP eCLIP12.26□□□□□ -0.453e-6■■□□□ 13.9
GGA3-205ENST00000578348 VTI1AQ96AJ9 217 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 CBWD1Q9BRT8 395 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 SLC40A1Q9NP59 571 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 KLC4Q9NSK0 619 aa12.26□□□□□ -0.45
GGA3-205ENST00000578348 EMSYQ7Z589 1322 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 DOCK5Q9H7D0 1870 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 ADM5C9JUS6 153 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 PHF2O75151 1096 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 DGAT1O75907 488 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 NUDT17P0C025 328 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 SUPT20HL2P0C7V6 817 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 CHN1P15882 459 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 NPTX2P47972 431 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 IREB2P48200 963 aaKnown RBP12.25□□□□□ -0.45
GGA3-205ENST00000578348 RTP1P59025 263 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 MCCD1P59942 119 aaPredicted RBP12.25□□□□□ -0.45
GGA3-205ENST00000578348 CETN1Q12798 172 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 SLC29A2Q14542 456 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 ANKRD20A8PQ5CZ79 823 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 CHADLQ6NUI6 762 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 SWSAP1Q6NVH7 229 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 ARHGEF19Q8IW93 802 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 UBL4BQ8N7F7 174 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 UHMK1Q8TAS1 419 aaKnown RBP12.25□□□□□ -0.45
GGA3-205ENST00000578348 RNF25Q96BH1 459 aaPredicted RBP12.25□□□□□ -0.45
GGA3-205ENST00000578348 CHMP6Q96FZ7 201 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 XPO6Q96QU8 1125 aaKnown RBP12.25□□□□□ -0.45
GGA3-205ENST00000578348 NTPCRQ9BSD7 190 aaKnown RBP12.25□□□□□ -0.45
GGA3-205ENST00000578348 ACTR5Q9H9F9 607 aaPredicted RBP12.25□□□□□ -0.45
GGA3-205ENST00000578348 CD248Q9HCU0 757 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 KMT5AQ9NQR1 393 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.25□□□□□ -0.453e-9■■■■■ 44.2
GGA3-205ENST00000578348 RNF181Q9P0P0 153 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 TBX20Q9UMR3 447 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 CCDC169A6NNP5 214 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 PMM2O15305 246 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 ATMINO43313 823 aaPredicted RBP12.25□□□□□ -0.45
GGA3-205ENST00000578348 RASSF9O75901 435 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 DRD4P21917 467 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 RPL21P46778 160 aaKnown RBP12.25□□□□□ -0.45
GGA3-205ENST00000578348 PRKCEQ02156 737 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 SF3A3Q12874 501 aaKnown RBP eCLIP12.25□□□□□ -0.451e-6■■■■□ 20.4
GGA3-205ENST00000578348 MESDQ14696 234 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 CLUL1Q15846 466 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 UBAP2Q5T6F2 1119 aaKnown RBP12.25□□□□□ -0.45
GGA3-205ENST00000578348 ERMARDQ5T6L9 678 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 CCDC60Q8IWA6 550 aaPredicted RBP12.25□□□□□ -0.45
GGA3-205ENST00000578348 RPUSD2Q8IZ73 545 aaKnown RBP12.25□□□□□ -0.45
GGA3-205ENST00000578348 ANKRD35Q8N283 1001 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 PRELID2Q8N945 189 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 JPH2Q9BR39 696 aaPredicted RBP12.25□□□□□ -0.45
GGA3-205ENST00000578348 AZI2Q9H6S1 392 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 PDLIM7Q9NR12 457 aa12.25□□□□□ -0.45
GGA3-205ENST00000578348 SEPT9Q9UHD8 586 aaPredicted RBP12.25□□□□□ -0.45
GGA3-205ENST00000578348 MIF4GDA9UHW6 222 aaKnown RBP12.24□□□□□ -0.45
GGA3-205ENST00000578348 MMEP08473 750 aa12.24□□□□□ -0.45
GGA3-205ENST00000578348 COMTP21964 271 aa12.24□□□□□ -0.45
GGA3-205ENST00000578348 CHRNA3P32297 505 aa12.24□□□□□ -0.45
GGA3-205ENST00000578348 ABCD1P33897 745 aa12.24□□□□□ -0.45
GGA3-205ENST00000578348 PTGIRP43119 386 aa12.24□□□□□ -0.45
GGA3-205ENST00000578348 GCLMP48507 274 aa12.24□□□□□ -0.45
GGA3-205ENST00000578348 ALDH5A1P51649 535 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms