RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 LAMP2P13473 410 aa13.85□□□□□ -0.19
SMARCD2-207ENST00000578234 EFNA5P52803 228 aa13.85□□□□□ -0.19
SMARCD2-207ENST00000578234 ELAVL2Q12926 359 aaKnown RBP13.85□□□□□ -0.19
SMARCD2-207ENST00000578234 ANGPT1Q15389 498 aa13.85□□□□□ -0.19
SMARCD2-207ENST00000578234 ZNF174Q15697 407 aa13.85□□□□□ -0.19
SMARCD2-207ENST00000578234 NAB2Q15742 525 aa13.85□□□□□ -0.19
SMARCD2-207ENST00000578234 FAM171A1Q5VUB5 890 aa13.85□□□□□ -0.19
SMARCD2-207ENST00000578234 PRSS55Q6UWB4 352 aaPredicted RBP13.85□□□□□ -0.19
SMARCD2-207ENST00000578234 CCDC105Q8IYK2 499 aa13.85□□□□□ -0.19
SMARCD2-207ENST00000578234 DTWD2Q8NBA8 298 aa13.85□□□□□ -0.19
SMARCD2-207ENST00000578234 DEPTORQ8TB45 409 aa13.85□□□□□ -0.19
SMARCD2-207ENST00000578234 HASPINQ8TF76 798 aa13.85□□□□□ -0.19
SMARCD2-207ENST00000578234 C8orf76Q96K31 380 aa13.85□□□□□ -0.19
SMARCD2-207ENST00000578234 TTPALQ9BTX7 342 aa13.85□□□□□ -0.19
SMARCD2-207ENST00000578234 CACNG4Q9UBN1 327 aa13.85□□□□□ -0.19
SMARCD2-207ENST00000578234 ZFP37Q9Y6Q3 630 aaPredicted RBP13.85□□□□□ -0.19
SMARCD2-207ENST00000578234 SPTBN4Q9H254 2564 aa13.85□□□□□ -0.19
SMARCD2-207ENST00000578234 KRBA1A5PL33 1030 aa13.84□□□□□ -0.19
SMARCD2-207ENST00000578234 CASTOR2A6NHX0 329 aa13.84□□□□□ -0.19
SMARCD2-207ENST00000578234 ANHXE9PGG2 379 aa13.84□□□□□ -0.19
SMARCD2-207ENST00000578234 RECQL4O94761 1208 aa13.84□□□□□ -0.19
SMARCD2-207ENST00000578234 KIF4AO95239 1232 aa13.84□□□□□ -0.19
SMARCD2-207ENST00000578234 HNRNPA1P09651 372 aaKnown RBP eCLIP13.84□□□□□ -0.19
SMARCD2-207ENST00000578234 TRAPPC10P48553 1259 aa13.84□□□□□ -0.19
SMARCD2-207ENST00000578234 HMGN5P82970 282 aaKnown RBP13.84□□□□□ -0.19
SMARCD2-207ENST00000578234 HAUS3Q68CZ6 603 aa13.84□□□□□ -0.19
SMARCD2-207ENST00000578234 PDXDC1Q6P996 788 aa13.84□□□□□ -0.19
SMARCD2-207ENST00000578234 NOSTRINQ8IVI9 506 aa13.84□□□□□ -0.19
SMARCD2-207ENST00000578234 FBXO18Q8NFZ0 1043 aa13.84□□□□□ -0.19
SMARCD2-207ENST00000578234 LNX1Q8TBB1 728 aaPredicted RBP13.84□□□□□ -0.19
SMARCD2-207ENST00000578234 KIFAP3Q92845 792 aa13.84□□□□□ -0.19
SMARCD2-207ENST00000578234 IFT74Q96LB3 600 aa13.84□□□□□ -0.19
SMARCD2-207ENST00000578234 CLSTN3Q9BQT9 956 aa13.84□□□□□ -0.19
SMARCD2-207ENST00000578234 FBXW11Q9UKB1 542 aa13.84□□□□□ -0.19
SMARCD2-207ENST00000578234 K7ELQ4 463 aaPredicted RBP13.83□□□□□ -0.2
SMARCD2-207ENST00000578234 EDN1P05305 212 aa13.83□□□□□ -0.2
SMARCD2-207ENST00000578234 GJB2P29033 226 aa13.83□□□□□ -0.2
SMARCD2-207ENST00000578234 HOXA9P31269 272 aa13.83□□□□□ -0.2
SMARCD2-207ENST00000578234 FXR2P51116 673 aaKnown RBP eCLIP13.83□□□□□ -0.2
SMARCD2-207ENST00000578234 PDIA5Q14554 519 aa13.83□□□□□ -0.2
SMARCD2-207ENST00000578234 PSMD5Q16401 504 aa13.83□□□□□ -0.2
SMARCD2-207ENST00000578234 DCAF4L1Q3SXM0 396 aa13.83□□□□□ -0.2
SMARCD2-207ENST00000578234 TTC38Q5R3I4 469 aa13.83□□□□□ -0.2
SMARCD2-207ENST00000578234 EEF1DP3Q658K8 133 aa13.83□□□□□ -0.2
SMARCD2-207ENST00000578234 HSCBQ8IWL3 235 aa13.83□□□□□ -0.2
SMARCD2-207ENST00000578234 CXCL16Q9H2A7 254 aa13.83□□□□□ -0.2
SMARCD2-207ENST00000578234 SMC3Q9UQE7 1217 aa13.83□□□□□ -0.2
SMARCD2-207ENST00000578234 USP20Q9Y2K6 914 aa13.83□□□□□ -0.2
SMARCD2-207ENST00000578234 TMEM189-UBE2V1I3L0A0 370 aa13.82□□□□□ -0.2
SMARCD2-207ENST00000578234 DCNP07585 359 aaKnown RBP13.82□□□□□ -0.2
SMARCD2-207ENST00000578234 FSHRP23945 695 aa13.82□□□□□ -0.2
SMARCD2-207ENST00000578234 CCT6AP40227 531 aaKnown RBP13.82□□□□□ -0.2
SMARCD2-207ENST00000578234 HTR4Q13639 388 aa13.82□□□□□ -0.2
SMARCD2-207ENST00000578234 ECM1Q16610 540 aa13.82□□□□□ -0.2
SMARCD2-207ENST00000578234 LIN9Q5TKA1 542 aa13.82□□□□□ -0.2
SMARCD2-207ENST00000578234 PHLDB3Q6NSJ2 640 aa13.82□□□□□ -0.2
SMARCD2-207ENST00000578234 DCLRE1AQ6PJP8 1040 aa13.82□□□□□ -0.2
SMARCD2-207ENST00000578234 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.82□□□□□ -0.2
SMARCD2-207ENST00000578234 GRASPQ7Z6J2 395 aaPredicted RBP13.82□□□□□ -0.2
SMARCD2-207ENST00000578234 C4orf32Q8N8J7 132 aa13.82□□□□□ -0.2
SMARCD2-207ENST00000578234 GPR152Q8TDT2 470 aa13.82□□□□□ -0.2
SMARCD2-207ENST00000578234 BHMT2Q9H2M3 363 aa13.82□□□□□ -0.2
SMARCD2-207ENST00000578234 TBC1D17Q9HA65 648 aa13.82□□□□□ -0.2
SMARCD2-207ENST00000578234 SLC2A4RGQ9NR83 387 aa13.82□□□□□ -0.2
SMARCD2-207ENST00000578234 LRWD1Q9UFC0 647 aa13.82□□□□□ -0.2
SMARCD2-207ENST00000578234 GDAQ9Y2T3 454 aa13.82□□□□□ -0.2
SMARCD2-207ENST00000578234 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.82□□□□□ -0.2
SMARCD2-207ENST00000578234 STK24Q9Y6E0 443 aa13.82□□□□□ -0.2
SMARCD2-207ENST00000578234 K7ERI5 159 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 B3GAT3O94766 335 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 C8AP07357 584 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 FGFR3P22607 806 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 U2AF2P26368 475 aaKnown RBP eCLIP13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 CUL4AQ13619 759 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 GNL2Q13823 731 aaKnown RBP13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 RAB33AQ14088 237 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 UVSSAQ2YD98 709 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 PPM1LQ5SGD2 360 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 NT5DC1Q5TFE4 455 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 ATF7IP2Q5U623 682 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 RTL10Q7L3V2 364 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 APBB1IPQ7Z5R6 666 aaPredicted RBP13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 IGSF22Q8N9C0 903 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 SPRYD3Q8NCJ5 442 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 SNX21Q969T3 373 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 UROC1Q96N76 676 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 PPP1R10Q96QC0 940 aaKnown RBP13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 RAB34Q9BZG1 259 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 POLD4Q9HCU8 107 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 CDH7Q9ULB5 785 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 NOL7Q9UMY1 257 aaKnown RBP13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 KIAA1024Q9UPX6 916 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 TNFSF13BQ9Y275 285 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 NUMBLQ9Y6R0 609 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 R4GN57 208 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 DMDP11532 3685 aa13.81□□□□□ -0.2
SMARCD2-207ENST00000578234 VWA8A3KMH1 1905 aa13.8□□□□□ -0.2
SMARCD2-207ENST00000578234 TRIP11Q15643 1979 aa13.8□□□□□ -0.2
SMARCD2-207ENST00000578234 CCL16O15467 120 aa13.8□□□□□ -0.2
SMARCD2-207ENST00000578234 ADAM12O43184 909 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms