RNA–Protein interactions for RNA: ENST00000576241.1

CCDC40-216, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-216ENST00000576241 PCDHB6Q9Y5E3 794 aa15.09■□□□□ 0.01
CCDC40-216ENST00000576241 USP24Q9UPU5 2620 aa15.08■□□□□ 0
CCDC40-216ENST00000576241 CCDC195A0A1B0GUA6 201 aa15.08■□□□□ 0
CCDC40-216ENST00000576241 RECQL4O94761 1208 aa15.08■□□□□ 0
CCDC40-216ENST00000576241 THP07101 528 aa15.08■□□□□ 0
CCDC40-216ENST00000576241 TOB1P50616 345 aaPredicted RBP15.08■□□□□ 0
CCDC40-216ENST00000576241 ECM1Q16610 540 aa15.08■□□□□ 0
CCDC40-216ENST00000576241 MCTP1Q6DN14 999 aa15.08■□□□□ 0
CCDC40-216ENST00000576241 CCDC105Q8IYK2 499 aa15.08■□□□□ 0
CCDC40-216ENST00000576241 IGSF22Q8N9C0 903 aa15.08■□□□□ 0
CCDC40-216ENST00000576241 STAMQ92783 540 aa15.08■□□□□ 0
CCDC40-216ENST00000576241 B3GALT6Q96L58 329 aa15.08■□□□□ 0
CCDC40-216ENST00000576241 HINFPQ9BQA5 517 aa15.08■□□□□ 0
CCDC40-216ENST00000576241 KIFC3Q9BVG8 833 aa15.08■□□□□ 0
CCDC40-216ENST00000576241 PLEKHA4Q9H4M7 779 aa15.08■□□□□ 0
CCDC40-216ENST00000576241 UPF2Q9HAU5 1272 aaKnown RBP15.08■□□□□ 0
CCDC40-216ENST00000576241 FNIP2Q9P278 1114 aa15.08■□□□□ 0
CCDC40-216ENST00000576241 CASTOR2A6NHX0 329 aa15.07■□□□□ 0
CCDC40-216ENST00000576241 PTGESO14684 152 aa15.07■□□□□ 0
CCDC40-216ENST00000576241 C1RP00736 705 aa15.07■□□□□ 0
CCDC40-216ENST00000576241 PRPHP41219 470 aa15.07■□□□□ 0
CCDC40-216ENST00000576241 RSPO4Q2I0M5 234 aaPredicted RBP15.07■□□□□ 0
CCDC40-216ENST00000576241 ATF7IP2Q5U623 682 aa15.07■□□□□ 0
CCDC40-216ENST00000576241 DTHD1Q6ZMT9 781 aa15.07■□□□□ 0
CCDC40-216ENST00000576241 PALB2Q86YC2 1186 aa15.07■□□□□ 0
CCDC40-216ENST00000576241 GLYCTKQ8IVS8 523 aa15.07■□□□□ 0
CCDC40-216ENST00000576241 FEZF2Q8TBJ5 459 aa15.07■□□□□ 0
CCDC40-216ENST00000576241 HASPINQ8TF76 798 aa15.07■□□□□ 0
CCDC40-216ENST00000576241 HDAC7Q8WUI4 952 aa15.07■□□□□ 0
CCDC40-216ENST00000576241 SEMA4AQ9H3S1 761 aa15.07■□□□□ 0
CCDC40-216ENST00000576241 CACNG4Q9UBN1 327 aa15.07■□□□□ 0
CCDC40-216ENST00000576241 USP20Q9Y2K6 914 aa15.07■□□□□ 0
CCDC40-216ENST00000576241 GDAQ9Y2T3 454 aa15.07■□□□□ 0
CCDC40-216ENST00000576241 CCDC169A6NNP5 214 aa15.06■□□□□ 0
CCDC40-216ENST00000576241 K7ERI5 159 aa15.06■□□□□ 0
CCDC40-216ENST00000576241 TGM5O43548 720 aa15.06■□□□□ 0
CCDC40-216ENST00000576241 KIF4AO95239 1232 aa15.06■□□□□ 0
CCDC40-216ENST00000576241 SPATA31D3P0C874 917 aa15.06■□□□□ 0
CCDC40-216ENST00000576241 MYBP10242 640 aa15.06■□□□□ 0
CCDC40-216ENST00000576241 PEX3P56589 373 aa15.06■□□□□ 0
CCDC40-216ENST00000576241 ELAVL2Q12926 359 aaKnown RBP15.06■□□□□ 0
CCDC40-216ENST00000576241 DMP1Q13316 513 aaPredicted RBP15.06■□□□□ 0
CCDC40-216ENST00000576241 RILPL1Q5EBL4 403 aa15.06■□□□□ 0
CCDC40-216ENST00000576241 EEF1DP3Q658K8 133 aa15.06■□□□□ 0
CCDC40-216ENST00000576241 SPATA31D4Q6ZUB0 917 aa15.06■□□□□ 0
CCDC40-216ENST00000576241 CEP57Q86XR8 500 aa15.06■□□□□ 0
CCDC40-216ENST00000576241 DCLK2Q8N568 766 aa15.06■□□□□ 0
CCDC40-216ENST00000576241 DTWD2Q8NBA8 298 aa15.06■□□□□ 0
CCDC40-216ENST00000576241 SMG7Q92540 1137 aaKnown RBP15.06■□□□□ 0
CCDC40-216ENST00000576241 DRC1Q96MC2 740 aa15.06■□□□□ 0
CCDC40-216ENST00000576241 PAAF1Q9BRP4 392 aa15.06■□□□□ 0
CCDC40-216ENST00000576241 RHOBTB2Q9BYZ6 727 aa15.06■□□□□ 0
CCDC40-216ENST00000576241 PIDD1Q9HB75 910 aa15.06■□□□□ 0
CCDC40-216ENST00000576241 POLD4Q9HCU8 107 aa15.06■□□□□ 0
CCDC40-216ENST00000576241 ZDHHC7Q9NXF8 308 aa15.06■□□□□ 0
CCDC40-216ENST00000576241 RALYQ9UKM9 306 aaKnown RBP15.06■□□□□ 0
CCDC40-216ENST00000576241 R4GN57 208 aa15.06■□□□□ 0
CCDC40-216ENST00000576241 PHLPP2Q6ZVD8 1323 aa15.06■□□□□ 0
CCDC40-216ENST00000576241 PP2D1A8MPX8 630 aa15.05■□□□□ -0
CCDC40-216ENST00000576241 E9PMD0 336 aa15.05■□□□□ -0
CCDC40-216ENST00000576241 H3BQV1 296 aa15.05■□□□□ -0
CCDC40-216ENST00000576241 RFPL2O75678 378 aa15.05■□□□□ -0
CCDC40-216ENST00000576241 EDN1P05305 212 aa15.05■□□□□ -0
CCDC40-216ENST00000576241 NPR3P17342 541 aa15.05■□□□□ -0
CCDC40-216ENST00000576241 AOC1P19801 751 aa15.05■□□□□ -0
CCDC40-216ENST00000576241 GBP2P32456 591 aaPredicted RBP15.05■□□□□ -0
CCDC40-216ENST00000576241 YARSP54577 528 aaKnown RBP15.05■□□□□ -0
CCDC40-216ENST00000576241 TDGQ13569 410 aa15.05■□□□□ -0
CCDC40-216ENST00000576241 COL9A2Q14055 689 aaPredicted RBP15.05■□□□□ -0
CCDC40-216ENST00000576241 RTP2Q5QGT7 225 aa15.05■□□□□ -0
CCDC40-216ENST00000576241 NT5DC1Q5TFE4 455 aa15.05■□□□□ -0
CCDC40-216ENST00000576241 FAM171A1Q5VUB5 890 aa15.05■□□□□ -0
CCDC40-216ENST00000576241 PDXDC1Q6P996 788 aa15.05■□□□□ -0
CCDC40-216ENST00000576241 PRSS55Q6UWB4 352 aaPredicted RBP15.05■□□□□ -0
CCDC40-216ENST00000576241 TTPALQ9BTX7 342 aa15.05■□□□□ -0
CCDC40-216ENST00000576241 WDR6Q9NNW5 1121 aaKnown RBP15.05■□□□□ -0
CCDC40-216ENST00000576241 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.05■□□□□ -0
CCDC40-216ENST00000576241 TNFSF13BQ9Y275 285 aa15.05■□□□□ -0
CCDC40-216ENST00000576241 CLUHO75153 1309 aa15.05■□□□□ -0
CCDC40-216ENST00000576241 PKD1L2Q7Z442 2459 aa15.04■□□□□ -0
CCDC40-216ENST00000576241 TDRD15B5MCY1 1934 aaKnown RBP15.04■□□□□ -0
CCDC40-216ENST00000576241 HIP1RO75146 1068 aa15.04■□□□□ -0
CCDC40-216ENST00000576241 RPL17P18621 184 aaKnown RBP15.04■□□□□ -0
CCDC40-216ENST00000576241 CDC25AP30304 524 aa15.04■□□□□ -0
CCDC40-216ENST00000576241 NPTX2P47972 431 aa15.04■□□□□ -0
CCDC40-216ENST00000576241 ZRSR1Q15695 479 aaKnown RBP15.04■□□□□ -0
CCDC40-216ENST00000576241 ZNF568Q3ZCX4 644 aa15.04■□□□□ -0
CCDC40-216ENST00000576241 PIK3R5Q8WYR1 880 aa15.04■□□□□ -0
CCDC40-216ENST00000576241 TMX3Q96JJ7 454 aa15.04■□□□□ -0
CCDC40-216ENST00000576241 CCDC94Q9BW85 323 aaPredicted RBP15.04■□□□□ -0
CCDC40-216ENST00000576241 C17orf75Q9HAS0 396 aa15.04■□□□□ -0
CCDC40-216ENST00000576241 KMT5AQ9NQR1 393 aa15.04■□□□□ -0
CCDC40-216ENST00000576241 TOPORSQ9NS56 1045 aaPredicted RBP15.04■□□□□ -0
CCDC40-216ENST00000576241 RBM19Q9Y4C8 960 aaKnown RBP15.04■□□□□ -0
CCDC40-216ENST00000576241 GJB2P29033 226 aa15.03■□□□□ -0
CCDC40-216ENST00000576241 ATP2C1P98194 919 aaPredicted RBP15.03■□□□□ -0
CCDC40-216ENST00000576241 NAB2Q15742 525 aa15.03■□□□□ -0
CCDC40-216ENST00000576241 PSMD5Q16401 504 aa15.03■□□□□ -0
CCDC40-216ENST00000576241 IL17AQ16552 155 aa15.03■□□□□ -0
CCDC40-216ENST00000576241 GLRA4Q5JXX5 417 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms