RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.21□□□□□ -0.78
CCDC40-212ENST00000574799 RBAK-RBAKDNI3L0D1 243 aa10.21□□□□□ -0.78
CCDC40-212ENST00000574799 ABLIM1O14639 778 aa10.21□□□□□ -0.78
CCDC40-212ENST00000574799 PEX11AO75192 247 aa10.21□□□□□ -0.78
CCDC40-212ENST00000574799 POLGP54098 1239 aaPredicted RBP10.21□□□□□ -0.78
CCDC40-212ENST00000574799 COG7P83436 770 aa10.21□□□□□ -0.78
CCDC40-212ENST00000574799 CLUL1Q15846 466 aa10.21□□□□□ -0.78
CCDC40-212ENST00000574799 BTNL9Q6UXG8 535 aa10.21□□□□□ -0.78
CCDC40-212ENST00000574799 PHLDB2Q86SQ0 1253 aa10.21□□□□□ -0.78
CCDC40-212ENST00000574799 NT5DC3Q86UY8 548 aa10.21□□□□□ -0.78
CCDC40-212ENST00000574799 ECHDC2Q86YB7 292 aa10.21□□□□□ -0.78
CCDC40-212ENST00000574799 ARHGAP24Q8N264 748 aa10.21□□□□□ -0.78
CCDC40-212ENST00000574799 HAUS1Q96CS2 278 aa10.21□□□□□ -0.78
CCDC40-212ENST00000574799 PNMA5Q96PV4 448 aa10.21□□□□□ -0.78
CCDC40-212ENST00000574799 UBN1Q9NPG3 1134 aa10.21□□□□□ -0.78
CCDC40-212ENST00000574799 PICK1Q9NRD5 415 aa10.21□□□□□ -0.78
CCDC40-212ENST00000574799 PPP1R9AQ9ULJ8 1098 aa10.21□□□□□ -0.78
CCDC40-212ENST00000574799 USP17L10C9JJH3 530 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 FAM200BP0CF97 657 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 RARGP13631 454 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 LMNB1P20700 586 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 SPARCL1Q14515 664 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 LRRC36Q1X8D7 754 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 AADACL2Q6P093 401 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 KCTD1Q719H9 257 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 KCNK18Q7Z418 384 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 FLAD1Q8NFF5 587 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 RFFLQ8WZ73 363 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 TEKT1Q969V4 418 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 MMADHCQ9H3L0 296 aaPredicted RBP10.2□□□□□ -0.78
CCDC40-212ENST00000574799 CDC42EP4Q9H3Q1 356 aaKnown RBP10.2□□□□□ -0.78
CCDC40-212ENST00000574799 BLOC1S4Q9NUP1 217 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 LRRC42Q9Y546 428 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 WDR90Q96KV7 1748 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 PHF2O75151 1096 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 NPM3O75607 178 aaKnown RBP10.2□□□□□ -0.78
CCDC40-212ENST00000574799 TDP2O95551 362 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 TTLL1O95922 423 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 GAS8O95995 478 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 ESRRAP11474 423 aaPredicted RBP10.2□□□□□ -0.78
CCDC40-212ENST00000574799 SERPINB3P29508 390 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 PRELPP51888 382 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 MCL1Q07820 350 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 TCP10Q12799 353 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 DUPD1Q68J44 220 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 GJB7Q6PEY0 223 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 CKAP2Q8WWK9 683 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 TRAPPC9Q96Q05 1148 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 LZTS2Q9BRK4 669 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 NPHS2Q9NP85 383 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 CHORDC1Q9UHD1 332 aaPredicted RBP10.2□□□□□ -0.78
CCDC40-212ENST00000574799 PHTF1Q9UMS5 762 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 KIAA0391O15091 583 aaKnown RBP10.2□□□□□ -0.78
CCDC40-212ENST00000574799 WFS1O76024 890 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 CEP70Q8NHQ1 597 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 ASAP3Q8TDY4 903 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 ZFAND2BQ8WV99 257 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 C9orf72Q96LT7 481 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 FAM161BQ96MY7 647 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 ROPN1BQ9BZX4 212 aaPredicted RBP10.2□□□□□ -0.78
CCDC40-212ENST00000574799 UBE2OQ9C0C9 1292 aaKnown RBP10.2□□□□□ -0.78
CCDC40-212ENST00000574799 DENND2DQ9H6A0 471 aaPredicted RBP10.2□□□□□ -0.78
CCDC40-212ENST00000574799 VPS37BQ9H9H4 285 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 ROPN1Q9HAT0 212 aaPredicted RBP10.2□□□□□ -0.78
CCDC40-212ENST00000574799 DMAP1Q9NPF5 467 aaPredicted RBP10.2□□□□□ -0.78
CCDC40-212ENST00000574799 AIPL1Q9NZN9 384 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 ZNF219Q9P2Y4 722 aaPredicted RBP10.2□□□□□ -0.78
CCDC40-212ENST00000574799 CNOT7Q9UIV1 285 aaKnown RBP10.2□□□□□ -0.78
CCDC40-212ENST00000574799 SYNGAP1Q96PV0 1343 aa10.2□□□□□ -0.78
CCDC40-212ENST00000574799 EXOC1LA0A1B0GW35 172 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 CLIC2O15247 247 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 KRT36O76013 467 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 ATF2P15336 505 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 HSPA6P17066 643 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 RPL13P26373 211 aaKnown RBP10.19□□□□□ -0.78
CCDC40-212ENST00000574799 SH3BGRP55822 239 aaPredicted RBP10.19□□□□□ -0.78
CCDC40-212ENST00000574799 TAF1BQ53T94 588 aaPredicted RBP10.19□□□□□ -0.78
CCDC40-212ENST00000574799 SGO2Q562F6 1265 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 HP1BP3Q5SSJ5 553 aaPredicted RBP10.19□□□□□ -0.78
CCDC40-212ENST00000574799 GALNT17Q6IS24 598 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 LRRC55Q6ZSA7 311 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 C1orf54Q8WWF1 131 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 CEP63Q96MT8 703 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 ERVK-5Q9HDB9 667 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 KIAA1024Q9UPX6 916 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 MEIS2O14770 477 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 ATP6V1G1O75348 118 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 NOL4O94818 638 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 HAUS5O94927 633 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 EEF2P13639 858 aaKnown RBP10.19□□□□□ -0.78
CCDC40-212ENST00000574799 GRB10Q13322 594 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 UBE2SQ16763 222 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 WASHC2DQ5SRD0 308 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 LRRC74BQ6ZQY2 392 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 NMD3Q96D46 503 aaKnown RBP10.19□□□□□ -0.78
CCDC40-212ENST00000574799 ZBED3Q96IU2 234 aaPredicted RBP10.19□□□□□ -0.78
CCDC40-212ENST00000574799 MAGEB18Q96M61 343 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 ADAM7Q9H2U9 754 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 ANAPC5Q9UJX4 755 aa10.19□□□□□ -0.78
CCDC40-212ENST00000574799 ANGPTL2Q9UKU9 493 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms