RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 USP17L13C9JLJ4 530 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 USP17L11C9JVI0 530 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 USP17L18D6R9N7 530 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 USP17L22D6RA61 530 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 USP17L17D6RBQ6 530 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 USP17L19D6RCP7 530 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 USP17L20D6RJB6 530 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 EDF1O60869 148 aaKnown RBP15.36■□□□□ 0.05
SMG6-215ENST00000574501 TBX10O75333 385 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 TJP3O95049 919 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 IVDP26440 423 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 PSMC2P35998 433 aaKnown RBP15.36■□□□□ 0.05
SMG6-215ENST00000574501 ADCY8P40145 1251 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 USP17L24Q0WX57 530 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 USP17L6PQ6QN14 398 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 NSMFQ6X4W1 530 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 RDH13Q8NBN7 331 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 MRRFQ96E11 262 aaKnown RBP15.36■□□□□ 0.05
SMG6-215ENST00000574501 NPHS2Q9NP85 383 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 DNM3Q9UQ16 869 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 MROH7Q68CQ1 1323 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 GSTTP1A0A1W2PQM5 241 aa15.35■□□□□ 0.05
SMG6-215ENST00000574501 TULP1O00294 542 aaPredicted RBP15.35■□□□□ 0.05
SMG6-215ENST00000574501 MAGEB2O15479 319 aa15.35■□□□□ 0.05
SMG6-215ENST00000574501 ECE2O60344 883 aa15.35■□□□□ 0.05
SMG6-215ENST00000574501 TCEA3O75764 348 aa15.35■□□□□ 0.05
SMG6-215ENST00000574501 GSTA2P09210 222 aa15.35■□□□□ 0.05
SMG6-215ENST00000574501 SMARCA1P28370 1054 aa15.35■□□□□ 0.05
SMG6-215ENST00000574501 RPA3P35244 121 aaPredicted RBP15.35■□□□□ 0.05
SMG6-215ENST00000574501 CLK2P49760 499 aaKnown RBP15.35■□□□□ 0.05
SMG6-215ENST00000574501 CYP2J2P51589 502 aa15.35■□□□□ 0.05
SMG6-215ENST00000574501 CYP4A11Q02928 519 aa15.35■□□□□ 0.05
SMG6-215ENST00000574501 RFX8Q6ZV50 586 aa15.35■□□□□ 0.05
SMG6-215ENST00000574501 NLRP9Q7RTR0 991 aa15.35■□□□□ 0.05
SMG6-215ENST00000574501 SH3TC2Q8TF17 1288 aa15.35■□□□□ 0.05
SMG6-215ENST00000574501 FAM118BQ9BPY3 351 aa15.35■□□□□ 0.05
SMG6-215ENST00000574501 DCTN4Q9UJW0 460 aa15.35■□□□□ 0.05
SMG6-215ENST00000574501 TRAFD1O14545 582 aaPredicted RBP15.35■□□□□ 0.05
SMG6-215ENST00000574501 LDHBP07195 334 aaKnown RBP15.35■□□□□ 0.05
SMG6-215ENST00000574501 FGFR1P11362 822 aa15.35■□□□□ 0.05
SMG6-215ENST00000574501 NMT1P30419 496 aaKnown RBP15.35■□□□□ 0.05
SMG6-215ENST00000574501 SLC16A2P36021 539 aa15.35■□□□□ 0.05
SMG6-215ENST00000574501 HADHBP55084 474 aaKnown RBP15.35■□□□□ 0.05
SMG6-215ENST00000574501 SYT2Q8N9I0 419 aaPredicted RBP15.35■□□□□ 0.05
SMG6-215ENST00000574501 GATA6Q92908 595 aa15.35■□□□□ 0.05
SMG6-215ENST00000574501 ACP6Q9NPH0 428 aa15.35■□□□□ 0.05
SMG6-215ENST00000574501 MYO3BQ8WXR4 1341 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 MAGEA13PA6NCF6 341 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 CRKLP46109 303 aaKnown RBP15.34■□□□□ 0.05
SMG6-215ENST00000574501 ERFP50548 548 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 OCRLQ01968 901 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 DYNC1I2Q13409 638 aaKnown RBP15.34■□□□□ 0.05
SMG6-215ENST00000574501 SPARCL1Q14515 664 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 KIF22Q14807 665 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 PLEKHG4Q58EX7 1191 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 HP1BP3Q5SSJ5 553 aaPredicted RBP15.34■□□□□ 0.05
SMG6-215ENST00000574501 RASIP1Q5U651 963 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 TTBK2Q6IQ55 1244 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 OTOAQ7RTW8 1153 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 CLNKQ7Z7G1 428 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 NBPF5PQ86XG9 351 aaPredicted RBP15.34■□□□□ 0.05
SMG6-215ENST00000574501 KBTBD2Q8IY47 623 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 ADGRF4Q8IZF3 695 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 C12orf50Q8NA57 414 aaPredicted RBP15.34■□□□□ 0.05
SMG6-215ENST00000574501 ZNF526Q8TF50 670 aaPredicted RBP15.34■□□□□ 0.05
SMG6-215ENST00000574501 MAML1Q92585 1016 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 BHMT2Q9H2M3 363 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 TLE6Q9H808 572 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 JMJD4Q9H9V9 463 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 UBE2TQ9NPD8 197 aaPredicted RBP15.34■□□□□ 0.05
SMG6-215ENST00000574501 SUGT1Q9Y2Z0 365 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 CFAP69A5D8W1 941 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 POC1B-GALNT4F8VUJ3 575 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 hCG_1984214I3L0E3 225 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 POTEJP0CG39 1038 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 ATF2P15336 505 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 SLC34A1Q06495 639 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 SLC1A5Q15758 541 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 CTC1Q2NKJ3 1217 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 CAPN12Q6ZSI9 719 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 ZNF713Q8N859 430 aaPredicted RBP15.34■□□□□ 0.05
SMG6-215ENST00000574501 DENND1AQ8TEH3 1009 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 WDR60Q8WVS4 1066 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 PCDHB18PQ96TA0 734 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 CCDC77Q9BR77 488 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 NUP85Q9BW27 656 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 PSTPIP2Q9H939 334 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 ZNF287Q9HBT7 754 aa15.34■□□□□ 0.05
SMG6-215ENST00000574501 ITGB4P16144 1822 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 WDR91A4D1P6 747 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 EXOC3O60645 756 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 TBCAO75347 108 aaKnown RBP15.33■□□□□ 0.04
SMG6-215ENST00000574501 PSMG1O95456 288 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 CYP1A1P04798 512 aaPredicted RBP15.33■□□□□ 0.04
SMG6-215ENST00000574501 RRM1P23921 792 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 MYL7Q01449 175 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 OVGP1Q12889 678 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 C16orf86Q6ZW13 317 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 TRABD2AQ86V40 505 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 ZNF564Q8TBZ8 553 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms