RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 UBOX5O94941 541 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 IVDP26440 423 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 ADSSP30520 456 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 PEX3P56589 373 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 SPP2Q13103 211 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 SAAL1Q96ER3 474 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 SERPINB12Q96P63 405 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 TACO1Q9BSH4 297 aaKnown RBP20.4■□□□□ 0.86
SCARF1-206ENST00000573852 TRIM7Q9C029 511 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 MLXIPLQ9NP71 852 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 PDE6BP35913 854 aa20.39■□□□□ 0.85
SCARF1-206ENST00000573852 TRIP13Q15645 432 aaPredicted RBP20.39■□□□□ 0.85
SCARF1-206ENST00000573852 SNRNP35Q16560 246 aaKnown RBP20.39■□□□□ 0.85
SCARF1-206ENST00000573852 TOPORSQ9NS56 1045 aaPredicted RBP20.39■□□□□ 0.85
SCARF1-206ENST00000573852 TCP10L2B9ZVM9 353 aa20.39■□□□□ 0.85
SCARF1-206ENST00000573852 CLTAP09496 248 aa20.39■□□□□ 0.85
SCARF1-206ENST00000573852 SLC8A1P32418 973 aa20.39■□□□□ 0.85
SCARF1-206ENST00000573852 CC2D2BQ6DHV5 1058 aa20.39■□□□□ 0.85
SCARF1-206ENST00000573852 ACAD10Q6JQN1 1059 aa20.39■□□□□ 0.85
SCARF1-206ENST00000573852 USP15Q9Y4E8 981 aaPredicted RBP20.39■□□□□ 0.85
SCARF1-206ENST00000573852 EZRP15311 586 aaKnown RBP20.38■□□□□ 0.85
SCARF1-206ENST00000573852 ITIH2P19823 946 aa20.38■□□□□ 0.85
SCARF1-206ENST00000573852 MPP2Q14168 576 aa20.38■□□□□ 0.85
SCARF1-206ENST00000573852 KYNUQ16719 465 aa20.38■□□□□ 0.85
SCARF1-206ENST00000573852 HERC5Q9UII4 1024 aaKnown RBP20.38■□□□□ 0.85
SCARF1-206ENST00000573852 C21orf2O43822 256 aa20.38■□□□□ 0.85
SCARF1-206ENST00000573852 NF2P35240 595 aa20.38■□□□□ 0.85
SCARF1-206ENST00000573852 QARSP47897 775 aaKnown RBP20.38■□□□□ 0.85
SCARF1-206ENST00000573852 KRT39Q6A163 491 aa20.38■□□□□ 0.85
SCARF1-206ENST00000573852 PNMA8AQ86V59 439 aaPredicted RBP20.38■□□□□ 0.85
SCARF1-206ENST00000573852 ANKRD42Q8N9B4 389 aa20.38■□□□□ 0.85
SCARF1-206ENST00000573852 TAS1R2Q8TE23 839 aa20.38■□□□□ 0.85
SCARF1-206ENST00000573852 PARD3BQ8TEW8 1205 aa20.38■□□□□ 0.85
SCARF1-206ENST00000573852 TBC1D31Q96DN5 1066 aa20.38■□□□□ 0.85
SCARF1-206ENST00000573852 AGBL1Q96MI9 1066 aa20.38■□□□□ 0.85
SCARF1-206ENST00000573852 PWWP2AQ96N64 755 aa20.38■□□□□ 0.85
SCARF1-206ENST00000573852 ST6GALNAC4Q9H4F1 302 aa20.38■□□□□ 0.85
SCARF1-206ENST00000573852 ANAPC7Q9UJX3 599 aa20.38■□□□□ 0.85
SCARF1-206ENST00000573852 TTC4O95801 387 aa20.37■□□□□ 0.85
SCARF1-206ENST00000573852 ELF1P32519 619 aa20.37■□□□□ 0.85
SCARF1-206ENST00000573852 ITGA8P53708 1063 aa20.37■□□□□ 0.85
SCARF1-206ENST00000573852 SNF8Q96H20 258 aa20.37■□□□□ 0.85
SCARF1-206ENST00000573852 KCNK9Q9NPC2 374 aa20.37■□□□□ 0.85
SCARF1-206ENST00000573852 COQ4Q9Y3A0 265 aa20.37■□□□□ 0.85
SCARF1-206ENST00000573852 GH1P01241 217 aa20.37■□□□□ 0.85
SCARF1-206ENST00000573852 YWHABP31946 246 aaKnown RBP20.37■□□□□ 0.85
SCARF1-206ENST00000573852 GPC3P51654 580 aa20.37■□□□□ 0.85
SCARF1-206ENST00000573852 NCALDP61601 193 aa20.37■□□□□ 0.85
SCARF1-206ENST00000573852 UGCGQ16739 394 aa20.37■□□□□ 0.85
SCARF1-206ENST00000573852 MAPK4P31152 587 aa20.36■□□□□ 0.85
SCARF1-206ENST00000573852 HSD17B4P51659 736 aa20.36■□□□□ 0.85
SCARF1-206ENST00000573852 NCKAP1LP55160 1127 aa20.36■□□□□ 0.85
SCARF1-206ENST00000573852 MCCD1P59942 119 aaPredicted RBP20.36■□□□□ 0.85
SCARF1-206ENST00000573852 KCNJ2P63252 427 aa20.36■□□□□ 0.85
SCARF1-206ENST00000573852 CLEC16AQ2KHT3 1053 aa20.36■□□□□ 0.85
SCARF1-206ENST00000573852 GALNTL6Q49A17 601 aa20.36■□□□□ 0.85
SCARF1-206ENST00000573852 NUGGCQ68CJ6 796 aa20.36■□□□□ 0.85
SCARF1-206ENST00000573852 PHLDB2Q86SQ0 1253 aa20.36■□□□□ 0.85
SCARF1-206ENST00000573852 CYP4X1Q8N118 509 aa20.36■□□□□ 0.85
SCARF1-206ENST00000573852 NLGN1Q8N2Q7 840 aa20.36■□□□□ 0.85
SCARF1-206ENST00000573852 N4BP2L2Q92802 583 aaPredicted RBP20.36■□□□□ 0.85
SCARF1-206ENST00000573852 CFAP73A6NFT4 308 aa20.36■□□□□ 0.85
SCARF1-206ENST00000573852 PTK6Q13882 451 aa20.36■□□□□ 0.85
SCARF1-206ENST00000573852 AOC3Q16853 763 aa20.36■□□□□ 0.85
SCARF1-206ENST00000573852 GDAP1Q8TB36 358 aa20.36■□□□□ 0.85
SCARF1-206ENST00000573852 NT5C1BQ96P26 610 aa20.36■□□□□ 0.85
SCARF1-206ENST00000573852 KIFC3Q9BVG8 833 aa20.36■□□□□ 0.85
SCARF1-206ENST00000573852 PLVAPQ9BX97 442 aa20.36■□□□□ 0.85
SCARF1-206ENST00000573852 AGO4Q9HCK5 861 aaKnown RBP20.36■□□□□ 0.85
SCARF1-206ENST00000573852 TMEM8AQ9HCN3 771 aa20.36■□□□□ 0.85
SCARF1-206ENST00000573852 R3HDM2Q9Y2K5 976 aaKnown RBP20.36■□□□□ 0.85
SCARF1-206ENST00000573852 TKFCQ3LXA3 575 aa20.35■□□□□ 0.85
SCARF1-206ENST00000573852 CKAP2Q8WWK9 683 aa20.35■□□□□ 0.85
SCARF1-206ENST00000573852 GLIS2Q9BZE0 524 aaPredicted RBP20.35■□□□□ 0.85
SCARF1-206ENST00000573852 DCLK3Q9C098 648 aa20.35■□□□□ 0.85
SCARF1-206ENST00000573852 ECT2Q9H8V3 914 aa20.35■□□□□ 0.85
SCARF1-206ENST00000573852 RAB20Q9NX57 234 aa20.35■□□□□ 0.85
SCARF1-206ENST00000573852 CLRN2A0PK11 232 aa20.35■□□□□ 0.85
SCARF1-206ENST00000573852 NFIBO00712 420 aa20.35■□□□□ 0.85
SCARF1-206ENST00000573852 ONECUT3O60422 494 aaPredicted RBP20.35■□□□□ 0.85
SCARF1-206ENST00000573852 CETPP11597 493 aa20.35■□□□□ 0.85
SCARF1-206ENST00000573852 VPS41P49754 854 aa20.35■□□□□ 0.85
SCARF1-206ENST00000573852 SNRPFP62306 86 aaKnown RBP20.35■□□□□ 0.85
SCARF1-206ENST00000573852 ACCSLQ4AC99 568 aa20.35■□□□□ 0.85
SCARF1-206ENST00000573852 FAM102BQ5T8I3 360 aa20.35■□□□□ 0.85
SCARF1-206ENST00000573852 LLGL2Q6P1M3 1020 aa20.35■□□□□ 0.85
SCARF1-206ENST00000573852 FBXL13Q8NEE6 735 aa20.35■□□□□ 0.85
SCARF1-206ENST00000573852 FAM84AQ96KN4 292 aa20.35■□□□□ 0.85
SCARF1-206ENST00000573852 NINJ2Q9NZG7 142 aa20.35■□□□□ 0.85
SCARF1-206ENST00000573852 TBX20Q9UMR3 447 aa20.35■□□□□ 0.85
SCARF1-206ENST00000573852 ASTN2O75129 1339 aaPredicted RBP20.35■□□□□ 0.85
SCARF1-206ENST00000573852 MROH7Q68CQ1 1323 aa20.35■□□□□ 0.85
SCARF1-206ENST00000573852 COL2A1P02458 1487 aaPredicted RBP20.34■□□□□ 0.85
SCARF1-206ENST00000573852 NQO1P15559 274 aaKnown RBP20.34■□□□□ 0.85
SCARF1-206ENST00000573852 SCP2P22307 547 aa20.34■□□□□ 0.85
SCARF1-206ENST00000573852 CNGA1P29973 690 aa20.34■□□□□ 0.85
SCARF1-206ENST00000573852 RIPK1Q13546 671 aa20.34■□□□□ 0.85
SCARF1-206ENST00000573852 TNIP1Q15025 636 aa20.34■□□□□ 0.85
SCARF1-206ENST00000573852 DAB2IPQ5VWQ8 1189 aa20.34■□□□□ 0.85
SCARF1-206ENST00000573852 KIFAP3Q92845 792 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms