RNA–Protein interactions for RNA: ENST00000572476.1

SLC12A4-210, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-210ENST00000572476 CACNB1Q02641 598 aaPredicted RBP16.32■□□□□ 0.2
SLC12A4-210ENST00000572476 MCL1Q07820 350 aa16.32■□□□□ 0.2
SLC12A4-210ENST00000572476 USP41Q3LFD5 358 aa16.32■□□□□ 0.2
SLC12A4-210ENST00000572476 ZNF568Q3ZCX4 644 aa16.32■□□□□ 0.2
SLC12A4-210ENST00000572476 SPECC1Q5M775 1068 aa16.32■□□□□ 0.2
SLC12A4-210ENST00000572476 KIAA1841Q6NSI8 718 aa16.32■□□□□ 0.2
SLC12A4-210ENST00000572476 KANK3Q6NY19 840 aa16.32■□□□□ 0.2
SLC12A4-210ENST00000572476 LILRA6Q6PI73 481 aa16.32■□□□□ 0.2
SLC12A4-210ENST00000572476 LARP4BQ92615 738 aaKnown RBP16.32■□□□□ 0.2
SLC12A4-210ENST00000572476 ZMAT2Q96NC0 199 aaKnown RBP16.32■□□□□ 0.2
SLC12A4-210ENST00000572476 CLIC6Q96NY7 704 aa16.32■□□□□ 0.2
SLC12A4-210ENST00000572476 NECTIN4Q96NY8 510 aa16.32■□□□□ 0.2
SLC12A4-210ENST00000572476 RHOBTB2Q9BYZ6 727 aa16.32■□□□□ 0.2
SLC12A4-210ENST00000572476 POMKQ9H5K3 350 aa16.32■□□□□ 0.2
SLC12A4-210ENST00000572476 PLXNA3P51805 1871 aa16.31■□□□□ 0.2
SLC12A4-210ENST00000572476 H0YCG3 227 aa16.31■□□□□ 0.2
SLC12A4-210ENST00000572476 C2CD2LO14523 706 aa16.31■□□□□ 0.2
SLC12A4-210ENST00000572476 TADA2AO75478 443 aa16.31■□□□□ 0.2
SLC12A4-210ENST00000572476 PIGRP01833 764 aa16.31■□□□□ 0.2
SLC12A4-210ENST00000572476 CA8P35219 290 aa16.31■□□□□ 0.2
SLC12A4-210ENST00000572476 UPP1Q16831 310 aa16.31■□□□□ 0.2
SLC12A4-210ENST00000572476 TMEM31Q5JXX7 168 aa16.31■□□□□ 0.2
SLC12A4-210ENST00000572476 HAUS6Q7Z4H7 955 aa16.31■□□□□ 0.2
SLC12A4-210ENST00000572476 GPR149Q86SP6 731 aa16.31■□□□□ 0.2
SLC12A4-210ENST00000572476 CMASQ8NFW8 434 aaPredicted RBP16.31■□□□□ 0.2
SLC12A4-210ENST00000572476 HDAC7Q8WUI4 952 aa16.31■□□□□ 0.2
SLC12A4-210ENST00000572476 B3GALT6Q96L58 329 aa16.31■□□□□ 0.2
SLC12A4-210ENST00000572476 SNX27Q96L92 541 aa16.31■□□□□ 0.2
SLC12A4-210ENST00000572476 CCDC94Q9BW85 323 aaPredicted RBP16.31■□□□□ 0.2
SLC12A4-210ENST00000572476 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.31■□□□□ 0.2
SLC12A4-210ENST00000572476 CNTN3Q9P232 1028 aa16.31■□□□□ 0.2
SLC12A4-210ENST00000572476 TRIOO75962 3097 aa16.31■□□□□ 0.2
SLC12A4-210ENST00000572476 SF3B1O75533 1304 aaKnown RBP eCLIP16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 VWA8A3KMH1 1905 aa16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 MTCL1Q9Y4B5 1905 aaKnown RBP16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 FAM189A1O60320 539 aa16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 ADH1AP07327 375 aa16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 MTHFRP42898 656 aa16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 GTF2BQ00403 316 aa16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 SOX4Q06945 474 aaPredicted RBP16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 STRN3Q13033 797 aa16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 SLC10A6Q3KNW5 377 aa16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 RTP2Q5QGT7 225 aa16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 RARS2Q5T160 578 aaKnown RBP16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 CES5AQ6NT32 575 aa16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 DCLRE1AQ6PJP8 1040 aa16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 ZBTB33Q86T24 672 aa16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 TMEM87AQ8NBN3 555 aa16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 LINC00301Q8NCQ3 95 aa16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 LNX1Q8TBB1 728 aaPredicted RBP16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 PIK3R5Q8WYR1 880 aa16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 UROC1Q96N76 676 aa16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 ACAP3Q96P50 834 aa16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 ST6GALNAC4Q9H4F1 302 aa16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 SFXN1Q9H9B4 322 aa16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 PARVGQ9HBI0 331 aa16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 TOPORSQ9NS56 1045 aaPredicted RBP16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 STK17AQ9UEE5 414 aa16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 MUTYHQ9UIF7 546 aa16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 TBX20Q9UMR3 447 aa16.3■□□□□ 0.2
SLC12A4-210ENST00000572476 DENND4AQ7Z401 1863 aa16.29■□□□□ 0.2
SLC12A4-210ENST00000572476 PRR33A8MZF0 331 aa16.29■□□□□ 0.2
SLC12A4-210ENST00000572476 ADRB2P07550 413 aa16.29■□□□□ 0.2
SLC12A4-210ENST00000572476 PDIA4P13667 645 aaKnown RBP16.29■□□□□ 0.2
SLC12A4-210ENST00000572476 COL9A1P20849 921 aa16.29■□□□□ 0.2
SLC12A4-210ENST00000572476 FGFR3P22607 806 aa16.29■□□□□ 0.2
SLC12A4-210ENST00000572476 CLCNKBP51801 687 aa16.29■□□□□ 0.2
SLC12A4-210ENST00000572476 OSTNP61366 133 aa16.29■□□□□ 0.2
SLC12A4-210ENST00000572476 CEBPZQ03701 1054 aaKnown RBP16.29■□□□□ 0.2
SLC12A4-210ENST00000572476 DHX8Q14562 1220 aaKnown RBP16.29■□□□□ 0.2
SLC12A4-210ENST00000572476 NOLC1Q14978 699 aaKnown RBP eCLIP16.29■□□□□ 0.2
SLC12A4-210ENST00000572476 GLRA4Q5JXX5 417 aa16.29■□□□□ 0.2
SLC12A4-210ENST00000572476 C15orf39Q6ZRI6 1047 aa16.29■□□□□ 0.2
SLC12A4-210ENST00000572476 C3orf58Q8NDZ4 430 aa16.29■□□□□ 0.2
SLC12A4-210ENST00000572476 RIN2Q8WYP3 895 aaPredicted RBP16.29■□□□□ 0.2
SLC12A4-210ENST00000572476 DNAJC19Q96DA6 116 aa16.29■□□□□ 0.2
SLC12A4-210ENST00000572476 RPGRIP1Q96KN7 1286 aa16.29■□□□□ 0.2
SLC12A4-210ENST00000572476 RIPOR3Q96MK2 946 aa16.29■□□□□ 0.2
SLC12A4-210ENST00000572476 CLSTN3Q9BQT9 956 aa16.29■□□□□ 0.2
SLC12A4-210ENST00000572476 TTPALQ9BTX7 342 aa16.29■□□□□ 0.2
SLC12A4-210ENST00000572476 STRA6Q9BX79 667 aa16.29■□□□□ 0.2
SLC12A4-210ENST00000572476 MYH15Q9Y2K3 1946 aa16.29■□□□□ 0.2
SLC12A4-210ENST00000572476 CITO14578 2027 aa16.28■□□□□ 0.2
SLC12A4-210ENST00000572476 A0A087X0B3 334 aa16.28■□□□□ 0.2
SLC12A4-210ENST00000572476 FAM86C2PA6NEL3 165 aa16.28■□□□□ 0.2
SLC12A4-210ENST00000572476 TRAK2O60296 914 aa16.28■□□□□ 0.2
SLC12A4-210ENST00000572476 FAM13AO94988 1023 aa16.28■□□□□ 0.2
SLC12A4-210ENST00000572476 GLUD1P00367 558 aa16.28■□□□□ 0.2
SLC12A4-210ENST00000572476 WEE2P0C1S8 567 aa16.28■□□□□ 0.2
SLC12A4-210ENST00000572476 YARSP54577 528 aaKnown RBP16.28■□□□□ 0.2
SLC12A4-210ENST00000572476 ELAVL2Q12926 359 aaKnown RBP16.28■□□□□ 0.2
SLC12A4-210ENST00000572476 ZBTB6Q15916 424 aa16.28■□□□□ 0.2
SLC12A4-210ENST00000572476 ATAT1Q5SQI0 421 aa16.28■□□□□ 0.2
SLC12A4-210ENST00000572476 FAM171A1Q5VUB5 890 aa16.28■□□□□ 0.2
SLC12A4-210ENST00000572476 SLC39A4Q6P5W5 647 aa16.28■□□□□ 0.2
SLC12A4-210ENST00000572476 PRSS55Q6UWB4 352 aaPredicted RBP16.28■□□□□ 0.2
SLC12A4-210ENST00000572476 CYP26C1Q6V0L0 522 aa16.28■□□□□ 0.2
SLC12A4-210ENST00000572476 MYCT1Q8N699 235 aa16.28■□□□□ 0.2
SLC12A4-210ENST00000572476 KRI1Q8N9T8 703 aaKnown RBP16.28■□□□□ 0.2
SLC12A4-210ENST00000572476 HASPINQ8TF76 798 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms