RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 SLC39A14Q15043 492 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 STK38Q15208 465 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 NAB2Q15742 525 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 KIAA0319Q5VV43 1072 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 RRAGBQ5VZM2 374 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 CES5AQ6NT32 575 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 HAUS6Q7Z4H7 955 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 PPFIBP1Q86W92 1011 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 CEP57Q86XR8 500 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 RIN2Q8WYP3 895 aaPredicted RBP19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 FBXL18Q96ME1 805 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 C1QTNF1Q9BXJ1 281 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 ADAM7Q9H2U9 754 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 PARVGQ9HBI0 331 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 TSHZ2Q9NRE2 1034 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 DZANK1Q9NVP4 752 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 MUTYHQ9UIF7 546 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 SSX2IPQ9Y2D8 614 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 SF3B1O75533 1304 aaKnown RBP eCLIP19.48■□□□□ 0.711e-8■■■■■ 60.3
CTDNEP1-207ENST00000572043 RPL17P18621 184 aaKnown RBP19.47■□□□□ 0.71
CTDNEP1-207ENST00000572043 IGFBP6P24592 240 aaPredicted RBP19.47■□□□□ 0.71
CTDNEP1-207ENST00000572043 USP41Q3LFD5 358 aa19.47■□□□□ 0.71
CTDNEP1-207ENST00000572043 PRSS55Q6UWB4 352 aaPredicted RBP19.47■□□□□ 0.71
CTDNEP1-207ENST00000572043 TMC5Q6UXY8 1006 aa19.47■□□□□ 0.71
CTDNEP1-207ENST00000572043 DYMQ7RTS9 669 aa19.47■□□□□ 0.71
CTDNEP1-207ENST00000572043 RNF135Q8IUD6 432 aa19.47■□□□□ 0.71
CTDNEP1-207ENST00000572043 KRI1Q8N9T8 703 aaKnown RBP19.47■□□□□ 0.71
CTDNEP1-207ENST00000572043 ACAP3Q96P50 834 aa19.47■□□□□ 0.71
CTDNEP1-207ENST00000572043 PPP1R10Q96QC0 940 aaKnown RBP19.47■□□□□ 0.71
CTDNEP1-207ENST00000572043 TOPORSQ9NS56 1045 aaPredicted RBP19.47■□□□□ 0.71
CTDNEP1-207ENST00000572043 CHST7Q9NS84 486 aa19.47■□□□□ 0.71
CTDNEP1-207ENST00000572043 SMIM28A0A1B0GU29 152 aa19.46■□□□□ 0.71
CTDNEP1-207ENST00000572043 H0YCG3 227 aa19.46■□□□□ 0.71
CTDNEP1-207ENST00000572043 TRAK2O60296 914 aa19.46■□□□□ 0.71
CTDNEP1-207ENST00000572043 TOM1L1O75674 476 aa19.46■□□□□ 0.71
CTDNEP1-207ENST00000572043 B3GAT3O94766 335 aa19.46■□□□□ 0.71
CTDNEP1-207ENST00000572043 ADH1AP07327 375 aa19.46■□□□□ 0.71
CTDNEP1-207ENST00000572043 SPATA31D3P0C874 917 aa19.46■□□□□ 0.71
CTDNEP1-207ENST00000572043 NMT1P30419 496 aaKnown RBP19.46■□□□□ 0.71
CTDNEP1-207ENST00000572043 CLCNKBP51801 687 aa19.46■□□□□ 0.71
CTDNEP1-207ENST00000572043 NOLC1Q14978 699 aaKnown RBP eCLIP19.46■□□□□ 0.71
CTDNEP1-207ENST00000572043 RTP2Q5QGT7 225 aa19.46■□□□□ 0.71
CTDNEP1-207ENST00000572043 FAM171A1Q5VUB5 890 aa19.46■□□□□ 0.71
CTDNEP1-207ENST00000572043 SPATA31D4Q6ZUB0 917 aa19.46■□□□□ 0.71
CTDNEP1-207ENST00000572043 PALB2Q86YC2 1186 aa19.46■□□□□ 0.71
CTDNEP1-207ENST00000572043 SNX27Q96L92 541 aa19.46■□□□□ 0.71
CTDNEP1-207ENST00000572043 ZNF396Q96N95 335 aaPredicted RBP19.46■□□□□ 0.71
CTDNEP1-207ENST00000572043 ZMAT2Q96NC0 199 aaKnown RBP19.46■□□□□ 0.71
CTDNEP1-207ENST00000572043 POMKQ9H5K3 350 aa19.46■□□□□ 0.71
CTDNEP1-207ENST00000572043 TBX20Q9UMR3 447 aa19.46■□□□□ 0.71
CTDNEP1-207ENST00000572043 BRWD1Q9NSI6 2320 aa19.45■□□□□ 0.7
CTDNEP1-207ENST00000572043 LOC730098B7Z3J9 87 aa19.45■□□□□ 0.7
CTDNEP1-207ENST00000572043 CLDN3O15551 220 aa19.45■□□□□ 0.7
CTDNEP1-207ENST00000572043 DCXO43602 365 aa19.45■□□□□ 0.7
CTDNEP1-207ENST00000572043 ALADP13716 330 aa19.45■□□□□ 0.7
CTDNEP1-207ENST00000572043 NASPP49321 788 aaPredicted RBP19.45■□□□□ 0.7
CTDNEP1-207ENST00000572043 LIG4P49917 911 aa19.45■□□□□ 0.7
CTDNEP1-207ENST00000572043 ZNF131P52739 623 aa19.45■□□□□ 0.7
CTDNEP1-207ENST00000572043 ITIH3Q06033 890 aa19.45■□□□□ 0.7
CTDNEP1-207ENST00000572043 SOX4Q06945 474 aaPredicted RBP19.45■□□□□ 0.7
CTDNEP1-207ENST00000572043 ZPBP2Q6X784 338 aa19.45■□□□□ 0.7
CTDNEP1-207ENST00000572043 LINC00301Q8NCQ3 95 aa19.45■□□□□ 0.7
CTDNEP1-207ENST00000572043 HAPLN2Q9GZV7 340 aa19.45■□□□□ 0.7
CTDNEP1-207ENST00000572043 RXFP1Q9HBX9 757 aa19.45■□□□□ 0.7
CTDNEP1-207ENST00000572043 MAN1C1Q9NR34 630 aa19.45■□□□□ 0.7
CTDNEP1-207ENST00000572043 STK17AQ9UEE5 414 aa19.45■□□□□ 0.7
CTDNEP1-207ENST00000572043 A0A087X0B3 334 aa19.44■□□□□ 0.7
CTDNEP1-207ENST00000572043 MEFVO15553 781 aaPredicted RBP19.44■□□□□ 0.7
CTDNEP1-207ENST00000572043 BRD1O95696 1058 aa19.44■□□□□ 0.7
CTDNEP1-207ENST00000572043 GLUD1P00367 558 aa19.44■□□□□ 0.7
CTDNEP1-207ENST00000572043 STAT6P42226 847 aa19.44■□□□□ 0.7
CTDNEP1-207ENST00000572043 SPAG1Q07617 926 aa19.44■□□□□ 0.7
CTDNEP1-207ENST00000572043 MCL1Q07820 350 aa19.44■□□□□ 0.7
CTDNEP1-207ENST00000572043 PKP1Q13835 747 aa19.44■□□□□ 0.7
CTDNEP1-207ENST00000572043 TMEM31Q5JXX7 168 aa19.44■□□□□ 0.7
CTDNEP1-207ENST00000572043 ALKAL1Q6UXT8 129 aa19.44■□□□□ 0.7
CTDNEP1-207ENST00000572043 PDILTQ8N807 584 aa19.44■□□□□ 0.7
CTDNEP1-207ENST00000572043 C18orf25Q96B23 403 aaPredicted RBP19.44■□□□□ 0.7
CTDNEP1-207ENST00000572043 RIPOR3Q96MK2 946 aa19.44■□□□□ 0.7
CTDNEP1-207ENST00000572043 TTPALQ9BTX7 342 aa19.44■□□□□ 0.7
CTDNEP1-207ENST00000572043 SFXN1Q9H9B4 322 aa19.44■□□□□ 0.7
CTDNEP1-207ENST00000572043 C11orf16Q9NQ32 467 aa19.44■□□□□ 0.7
CTDNEP1-207ENST00000572043 DAXXQ9UER7 740 aaPredicted RBP19.44■□□□□ 0.7
CTDNEP1-207ENST00000572043 RAPGEFL1Q9UHV5 662 aa19.44■□□□□ 0.7
CTDNEP1-207ENST00000572043 MYMKA6NI61 221 aa19.43■□□□□ 0.7
CTDNEP1-207ENST00000572043 I3L4J1 428 aa19.43■□□□□ 0.7
CTDNEP1-207ENST00000572043 HNRNPDLO14979 420 aaKnown RBP19.43■□□□□ 0.7
CTDNEP1-207ENST00000572043 SPTLC2O15270 562 aa19.43■□□□□ 0.7
CTDNEP1-207ENST00000572043 ZSCAN22P10073 491 aaPredicted RBP19.43■□□□□ 0.7
CTDNEP1-207ENST00000572043 BRCC3P46736 316 aa19.43■□□□□ 0.7
CTDNEP1-207ENST00000572043 ZC2HC1CQ53FD0 456 aaPredicted RBP19.43■□□□□ 0.7
CTDNEP1-207ENST00000572043 XKR4Q5GH76 650 aa19.43■□□□□ 0.7
CTDNEP1-207ENST00000572043 ATAT1Q5SQI0 421 aa19.43■□□□□ 0.7
CTDNEP1-207ENST00000572043 CCDC73Q6ZRK6 1079 aa19.43■□□□□ 0.7
CTDNEP1-207ENST00000572043 SV2BQ7L1I2 683 aa19.43■□□□□ 0.7
CTDNEP1-207ENST00000572043 SFR1Q86XK3 245 aa19.43■□□□□ 0.7
CTDNEP1-207ENST00000572043 DDX12PQ92771 950 aa19.43■□□□□ 0.7
CTDNEP1-207ENST00000572043 LRFN3Q9BTN0 628 aa19.43■□□□□ 0.7
CTDNEP1-207ENST00000572043 TBC1D7Q9P0N9 293 aa19.43■□□□□ 0.7
CTDNEP1-207ENST00000572043 F13A1P00488 732 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms