RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 ASIC4Q96FT7 647 aa10.7□□□□□ -0.7
CIITA-207ENST00000571545 DDX27Q96GQ7 796 aaKnown RBP10.7□□□□□ -0.7
CIITA-207ENST00000571545 TBC1D32Q96NH3 1257 aa10.7□□□□□ -0.7
CIITA-207ENST00000571545 PIDD1Q9HB75 910 aa10.7□□□□□ -0.7
CIITA-207ENST00000571545 MIOSQ9NXC5 875 aa10.7□□□□□ -0.7
CIITA-207ENST00000571545 SNTG2Q9NY99 539 aa10.7□□□□□ -0.7
CIITA-207ENST00000571545 LARSQ9P2J5 1176 aaKnown RBP10.7□□□□□ -0.7
CIITA-207ENST00000571545 ARHGAP28Q9P2N2 729 aa10.7□□□□□ -0.7
CIITA-207ENST00000571545 CCDC195A0A1B0GUA6 201 aa10.69□□□□□ -0.7
CIITA-207ENST00000571545 CASTOR2A6NHX0 329 aa10.69□□□□□ -0.7
CIITA-207ENST00000571545 E9PMD0 336 aa10.69□□□□□ -0.7
CIITA-207ENST00000571545 PTGESO14684 152 aa10.69□□□□□ -0.7
CIITA-207ENST00000571545 KIF4AO95239 1232 aa10.69□□□□□ -0.7
CIITA-207ENST00000571545 HNRNPA1P09651 372 aaKnown RBP eCLIP10.69□□□□□ -0.7
CIITA-207ENST00000571545 MCF2P10911 925 aa10.69□□□□□ -0.7
CIITA-207ENST00000571545 HOXA9P31269 272 aa10.69□□□□□ -0.7
CIITA-207ENST00000571545 PSMD5Q16401 504 aa10.69□□□□□ -0.7
CIITA-207ENST00000571545 ECM1Q16610 540 aa10.69□□□□□ -0.7
CIITA-207ENST00000571545 KYAT1Q16773 422 aa10.69□□□□□ -0.7
CIITA-207ENST00000571545 RINT1Q6NUQ1 792 aa10.69□□□□□ -0.7
CIITA-207ENST00000571545 SPIRE2Q8WWL2 714 aa10.69□□□□□ -0.7
CIITA-207ENST00000571545 SMG7Q92540 1137 aaKnown RBP10.69□□□□□ -0.7
CIITA-207ENST00000571545 CALML4Q96GE6 196 aa10.69□□□□□ -0.7
CIITA-207ENST00000571545 KIFC3Q9BVG8 833 aa10.69□□□□□ -0.7
CIITA-207ENST00000571545 GPR62Q9BZJ7 368 aa10.69□□□□□ -0.7
CIITA-207ENST00000571545 MFSD1Q9H3U5 465 aa10.69□□□□□ -0.7
CIITA-207ENST00000571545 WDR6Q9NNW5 1121 aaKnown RBP10.69□□□□□ -0.7
CIITA-207ENST00000571545 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.69□□□□□ -0.7
CIITA-207ENST00000571545 ODF2LQ9ULJ1 636 aa10.69□□□□□ -0.7
CIITA-207ENST00000571545 GDAQ9Y2T3 454 aa10.69□□□□□ -0.7
CIITA-207ENST00000571545 ZFP37Q9Y6Q3 630 aaPredicted RBP10.69□□□□□ -0.7
CIITA-207ENST00000571545 PIEZO1Q92508 2521 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 ZDBF2Q9HCK1 2354 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 VWA3AA6NCI4 1184 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 TGM5O43548 720 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 XYLBO75191 536 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 TOM1L1O75674 476 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 B3GAT3O94766 335 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 BRD1O95696 1058 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 WEE2P0C1S8 567 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 PLS3P13797 630 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 NHLH1Q02575 133 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 TDGQ13569 410 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 NOLC1Q14978 699 aaKnown RBP eCLIP10.68□□□□□ -0.7
CIITA-207ENST00000571545 ZRSR1Q15695 479 aaKnown RBP10.68□□□□□ -0.7
CIITA-207ENST00000571545 FAM171A1Q5VUB5 890 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 LARP1BQ659C4 914 aaKnown RBP10.68□□□□□ -0.7
CIITA-207ENST00000571545 MPZL3Q6UWV2 235 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 ZPBP2Q6X784 338 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 ANKS3Q6ZW76 656 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 C1orf186Q6ZWK4 172 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 TAS1R1Q7RTX1 841 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 CEP57Q86XR8 500 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 SYT2Q8N9I0 419 aaPredicted RBP10.68□□□□□ -0.7
CIITA-207ENST00000571545 RASSF8Q8NHQ8 419 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 PPP1R10Q96QC0 940 aaKnown RBP10.68□□□□□ -0.7
CIITA-207ENST00000571545 ACO2Q99798 780 aaKnown RBP10.68□□□□□ -0.7
CIITA-207ENST00000571545 NTPCRQ9BSD7 190 aaKnown RBP10.68□□□□□ -0.7
CIITA-207ENST00000571545 TCHPQ9BT92 498 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 RUSC1Q9BVN2 902 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 PRKD2Q9BZL6 878 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 MYO10Q9HD67 2058 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 TRIP11Q15643 1979 aa10.68□□□□□ -0.7
CIITA-207ENST00000571545 TTLL13PA6NNM8 815 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 PP2D1A8MPX8 630 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 ZMYND10O75800 440 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 POU2F2P09086 479 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 GBP2P32456 591 aaPredicted RBP10.67□□□□□ -0.7
CIITA-207ENST00000571545 LONP1P36776 959 aaKnown RBP10.67□□□□□ -0.7
CIITA-207ENST00000571545 UBA7P41226 1012 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 UVSSAQ2YD98 709 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 RTP2Q5QGT7 225 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 NT5DC1Q5TFE4 455 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 EEF1DP3Q658K8 133 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 LILRA6Q6PI73 481 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 DCLRE1AQ6PJP8 1040 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 PALB2Q86YC2 1186 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 HASPINQ8TF76 798 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 KCNN1Q92952 543 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 SNX27Q96L92 541 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 ACAP3Q96P50 834 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 TSPAN18Q96SJ8 248 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 MMTAG2Q9BU76 263 aaKnown RBP10.67□□□□□ -0.7
CIITA-207ENST00000571545 CDT1Q9H211 546 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 EPS15L1Q9UBC2 864 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 MTRRQ9UBK8 725 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 LIMD1Q9UGP4 676 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 CDH22Q9UJ99 828 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 FBXW11Q9UKB1 542 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 DUSP12Q9UNI6 340 aa10.67□□□□□ -0.7
CIITA-207ENST00000571545 PDCD11Q14690 1871 aaKnown RBP10.67□□□□□ -0.7
CIITA-207ENST00000571545 VWA8A3KMH1 1905 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 SMIM28A0A1B0GU29 152 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 F8W810 466 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 SYN3O14994 580 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 SLC16A4O15374 487 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 XPOTO43592 962 aaKnown RBP10.66□□□□□ -0.7
CIITA-207ENST00000571545 PLA2G4BP0C869 781 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 KCNE1P15382 129 aa10.66□□□□□ -0.7
CIITA-207ENST00000571545 FGFR3P22607 806 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms