RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 HAUS6Q7Z4H7 955 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 APBB1IPQ7Z5R6 666 aaPredicted RBP5.93□□□□□ -1.46
CHD3-212ENST00000570758 PPFIBP1Q86W92 1011 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 PALB2Q86YC2 1186 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 TMEM130Q8N3G9 435 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 FOXD4L4Q8WXT5 416 aaPredicted RBP5.93□□□□□ -1.46
CHD3-212ENST00000570758 RIN2Q8WYP3 895 aaPredicted RBP5.93□□□□□ -1.46
CHD3-212ENST00000570758 SNX27Q96L92 541 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 ZMAT2Q96NC0 199 aaKnown RBP5.93□□□□□ -1.46
CHD3-212ENST00000570758 FIZ1Q96SL8 496 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 CCDC94Q9BW85 323 aaPredicted RBP5.93□□□□□ -1.46
CHD3-212ENST00000570758 GOLGA2P5Q9HBQ8 144 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 MAN1C1Q9NR34 630 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 DZANK1Q9NVP4 752 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 KCND2Q9NZV8 630 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 TFIP11Q9UBB9 837 aaKnown RBP5.93□□□□□ -1.46
CHD3-212ENST00000570758 STK39Q9UEW8 545 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 ODF2LQ9ULJ1 636 aa5.93□□□□□ -1.46
CHD3-212ENST00000570758 SRPRBQ9Y5M8 271 aaKnown RBP5.93□□□□□ -1.46
CHD3-212ENST00000570758 SF3B1O75533 1304 aaKnown RBP eCLIP5.93□□□□□ -1.46
CHD3-212ENST00000570758 PLXNA3P51805 1871 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 NCOR1O75376 2440 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 MYMKA6NI61 221 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 C2CD4DB7Z1M9 353 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 TMEM189-UBE2V1I3L0A0 370 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 I3L4J1 428 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 K7ENM7 598 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 ADAM12O43184 909 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 TOM1L1O75674 476 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 B3GAT3O94766 335 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 FAM13AO94988 1023 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 ADH1AP07327 375 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 SPATA31D3P0C874 917 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 ALADP13716 330 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 KCNE1P15382 129 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 NMT1P30419 496 aaKnown RBP5.92□□□□□ -1.46
CHD3-212ENST00000570758 DDIT3P35638 169 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 MTHFRP42898 656 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 BRCC3P46736 316 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 NASPP49321 788 aaPredicted RBP5.92□□□□□ -1.46
CHD3-212ENST00000570758 CLCNKBP51801 687 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 ZNF131P52739 623 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 SMTNP53814 917 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 YARSP54577 528 aaKnown RBP5.92□□□□□ -1.46
CHD3-212ENST00000570758 ITIH3Q06033 890 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 MCL1Q07820 350 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 STRN3Q13033 797 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 NOLC1Q14978 699 aaKnown RBP eCLIP5.92□□□□□ -1.46
CHD3-212ENST00000570758 SLC39A14Q15043 492 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 UPP1Q16831 310 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 SLC10A6Q3KNW5 377 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 USP41Q3LFD5 358 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 ZBTB41Q5SVQ8 909 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 FAM171A1Q5VUB5 890 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 RRAGBQ5VZM2 374 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 CES5AQ6NT32 575 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 SLC39A4Q6P5W5 647 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 LILRA6Q6PI73 481 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 DCLRE1AQ6PJP8 1040 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 ZPBP2Q6X784 338 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 SPATA31D4Q6ZUB0 917 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 GPR149Q86SP6 731 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 CEP57Q86XR8 500 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 GLYCTKQ8IVS8 523 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 HSCBQ8IWL3 235 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 MYCT1Q8N699 235 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 LINC00301Q8NCQ3 95 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 C3orf58Q8NDZ4 430 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 RASSF8Q8NHQ8 419 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 LNX1Q8TBB1 728 aaPredicted RBP5.92□□□□□ -1.46
CHD3-212ENST00000570758 PIK3R5Q8WYR1 880 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 LARP4BQ92615 738 aaKnown RBP5.92□□□□□ -1.46
CHD3-212ENST00000570758 KCNN1Q92952 543 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 C18orf25Q96B23 403 aaPredicted RBP5.92□□□□□ -1.46
CHD3-212ENST00000570758 RIPOR3Q96MK2 946 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 ACAP3Q96P50 834 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 CLSTN3Q9BQT9 956 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 TCHPQ9BT92 498 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 TTPALQ9BTX7 342 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 IKZF4Q9H2S9 585 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 ZHX3Q9H4I2 956 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 ZSCAN16Q9H4T2 348 aaPredicted RBP5.92□□□□□ -1.46
CHD3-212ENST00000570758 SFXN1Q9H9B4 322 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 PARVGQ9HBI0 331 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 TSHZ2Q9NRE2 1034 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 CNTN3Q9P232 1028 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 FNIP2Q9P278 1114 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 LARSQ9P2J5 1176 aaKnown RBP5.92□□□□□ -1.46
CHD3-212ENST00000570758 ANKFY1Q9P2R3 1169 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 KCNG1Q9UIX4 513 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 TBX20Q9UMR3 447 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 SSX2IPQ9Y2D8 614 aa5.92□□□□□ -1.46
CHD3-212ENST00000570758 MORC2Q9Y6X9 1032 aaPredicted RBP5.92□□□□□ -1.46
CHD3-212ENST00000570758 MYH11P35749 1972 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 CCDC195A0A1B0GUA6 201 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 SPDYE4A6NLX3 237 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 TISP43B9A030 160 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 ANKRD63C9JTQ0 380 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 H0YCG3 227 aa5.91□□□□□ -1.46
CHD3-212ENST00000570758 PODXLO00592 558 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms