RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 SSR1P43307 286 aaKnown RBP16.44■□□□□ 0.22
SMG6-207ENST00000570756 TUBP50607 506 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 ITGA8P53708 1063 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 SPARCL1Q14515 664 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 SLC5A9Q2M3M2 681 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 GPATCH4Q5T3I0 446 aaKnown RBP16.44■□□□□ 0.22
SMG6-207ENST00000570756 CEP128Q6ZU80 1094 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 STXBP4Q6ZWJ1 553 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 AMIGO3Q86WK7 504 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 TRIM4Q9C037 500 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 DLGAP2Q9P1A6 1054 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 ANAPC5Q9UJX4 755 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 UBE4BO95155 1302 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 FSCN2O14926 492 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 ASMTLO95671 621 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 PTPN4P29074 926 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 RNASELQ05823 741 aaKnown RBP16.44■□□□□ 0.22
SMG6-207ENST00000570756 DNAJC3Q13217 504 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 CCDC6Q16204 474 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 SLC15A2Q16348 729 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 PHLDB3Q6NSJ2 640 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 ZNF449Q6P9G9 518 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 RPUSD2Q8IZ73 545 aaKnown RBP16.44■□□□□ 0.22
SMG6-207ENST00000570756 KCTD17Q8N5Z5 321 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 BBOF1Q8ND07 529 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 ETNPPLQ8TBG4 499 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 ZNF564Q8TBZ8 553 aaPredicted RBP16.44■□□□□ 0.22
SMG6-207ENST00000570756 DENND2DQ9H6A0 471 aaPredicted RBP16.44■□□□□ 0.22
SMG6-207ENST00000570756 RABGAP1Q9Y3P9 1069 aa16.44■□□□□ 0.22
SMG6-207ENST00000570756 ECE2O60344 883 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 SORBS3O60504 671 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 TRIM49P0CI25 452 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 TRIM49CP0CI26 452 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 GZMAP12544 262 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 WDR4P57081 412 aaKnown RBP16.43■□□□□ 0.22
SMG6-207ENST00000570756 ADCY1Q08828 1119 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 CETN1Q12798 172 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 TBC1D9BQ66K14 1250 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 SEPT14Q6ZU15 432 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 C1orf54Q8WWF1 131 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 ZNF333Q96JL9 665 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 TMX4Q9H1E5 349 aaPredicted RBP16.43■□□□□ 0.22
SMG6-207ENST00000570756 TLE6Q9H808 572 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 USP17L15C9J2P7 530 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 USP17L13C9JLJ4 530 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 USP17L11C9JVI0 530 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 USP17L18D6R9N7 530 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 USP17L22D6RA61 530 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 USP17L17D6RBQ6 530 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 USP17L19D6RCP7 530 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 USP17L20D6RJB6 530 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 CLDN3O15551 220 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 ENTPD5O75356 428 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 SLC18A1P54219 525 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 USP17L24Q0WX57 530 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 AP3B2Q13367 1082 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 SNX1Q13596 522 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 PRR16Q569H4 304 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 USP17L6PQ6QN14 398 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 MYCT1Q8N699 235 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 FAM136AQ96C01 138 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 NYXQ9GZU5 481 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 SAR1AQ9NR31 198 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 DNAJC17Q9NVM6 304 aaKnown RBP16.43■□□□□ 0.22
SMG6-207ENST00000570756 NMRK1Q9NWW6 199 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 LNPEPQ9UIQ6 1025 aa16.43■□□□□ 0.22
SMG6-207ENST00000570756 T-ENOLP0DO92 83 aa16.42■□□□□ 0.22
SMG6-207ENST00000570756 ADCY8P40145 1251 aa16.42■□□□□ 0.22
SMG6-207ENST00000570756 TNIP1Q15025 636 aa16.42■□□□□ 0.22
SMG6-207ENST00000570756 TMED2Q15363 201 aa16.42■□□□□ 0.22
SMG6-207ENST00000570756 GRIK5Q16478 980 aa16.42■□□□□ 0.22
SMG6-207ENST00000570756 ZNF804AQ7Z570 1209 aa16.42■□□□□ 0.22
SMG6-207ENST00000570756 DEFB132Q7Z7B7 95 aa16.42■□□□□ 0.22
SMG6-207ENST00000570756 SUPT20HQ8NEM7 779 aa16.42■□□□□ 0.22
SMG6-207ENST00000570756 TTC8Q8TAM2 541 aa16.42■□□□□ 0.22
SMG6-207ENST00000570756 KIFAP3Q92845 792 aa16.42■□□□□ 0.22
SMG6-207ENST00000570756 NUP85Q9BW27 656 aa16.42■□□□□ 0.22
SMG6-207ENST00000570756 UBE2TQ9NPD8 197 aaPredicted RBP16.42■□□□□ 0.22
SMG6-207ENST00000570756 UVRAGQ9P2Y5 699 aa16.42■□□□□ 0.22
SMG6-207ENST00000570756 SMG5Q9UPR3 1016 aaKnown RBP16.42■□□□□ 0.22
SMG6-207ENST00000570756 PRPF4O43172 522 aaKnown RBP eCLIP16.41■□□□□ 0.22
SMG6-207ENST00000570756 EDF1O60869 148 aaKnown RBP16.41■□□□□ 0.22
SMG6-207ENST00000570756 CETPP11597 493 aa16.41■□□□□ 0.22
SMG6-207ENST00000570756 MUTP22033 750 aa16.41■□□□□ 0.22
SMG6-207ENST00000570756 IVDP26440 423 aa16.41■□□□□ 0.22
SMG6-207ENST00000570756 RFC5P40937 340 aa16.41■□□□□ 0.22
SMG6-207ENST00000570756 CYP2J2P51589 502 aa16.41■□□□□ 0.22
SMG6-207ENST00000570756 CDR2Q01850 454 aa16.41■□□□□ 0.22
SMG6-207ENST00000570756 EN1Q05925 392 aaPredicted RBP16.41■□□□□ 0.22
SMG6-207ENST00000570756 BFSP1Q12934 665 aa16.41■□□□□ 0.22
SMG6-207ENST00000570756 PDK4Q16654 411 aa16.41■□□□□ 0.22
SMG6-207ENST00000570756 Q4G0T1 1027 aa16.41■□□□□ 0.22
SMG6-207ENST00000570756 SLC45A4Q5BKX6 768 aa16.41■□□□□ 0.22
SMG6-207ENST00000570756 RELL1Q8IUW5 271 aa16.41■□□□□ 0.22
SMG6-207ENST00000570756 FAM20AQ96MK3 541 aa16.41■□□□□ 0.22
SMG6-207ENST00000570756 ZFP69BQ9UJL9 534 aa16.41■□□□□ 0.22
SMG6-207ENST00000570756 GSTTP1A0A1W2PQM5 241 aa16.41■□□□□ 0.22
SMG6-207ENST00000570756 USP17L10C9JJH3 530 aa16.41■□□□□ 0.22
SMG6-207ENST00000570756 ABHD2P08910 425 aa16.41■□□□□ 0.22
SMG6-207ENST00000570756 NMT1P30419 496 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms