RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 CXCL16Q9H2A7 254 aa13.39□□□□□ -0.27
NUP93-220ENST00000569842 TOPORSQ9NS56 1045 aaPredicted RBP13.39□□□□□ -0.27
NUP93-220ENST00000569842 TTC26A0AVF1 554 aa13.39□□□□□ -0.27
NUP93-220ENST00000569842 EOMESO95936 686 aa13.39□□□□□ -0.27
NUP93-220ENST00000569842 PPP2R3AQ06190 1150 aa13.39□□□□□ -0.27
NUP93-220ENST00000569842 KRT31Q15323 416 aa13.39□□□□□ -0.27
NUP93-220ENST00000569842 DCAF17Q5H9S7 520 aaPredicted RBP13.39□□□□□ -0.27
NUP93-220ENST00000569842 SNX27Q96L92 541 aa13.39□□□□□ -0.27
NUP93-220ENST00000569842 FNBP1Q96RU3 617 aa13.39□□□□□ -0.27
NUP93-220ENST00000569842 TUBGCP2Q9BSJ2 902 aa13.39□□□□□ -0.27
NUP93-220ENST00000569842 RNF19AQ9NV58 838 aa13.39□□□□□ -0.27
NUP93-220ENST00000569842 CAPN15O75808 1086 aa13.38□□□□□ -0.27
NUP93-220ENST00000569842 TRIM49P0CI25 452 aa13.38□□□□□ -0.27
NUP93-220ENST00000569842 TRIM49CP0CI26 452 aa13.38□□□□□ -0.27
NUP93-220ENST00000569842 PRKCSHP14314 528 aaPredicted RBP13.38□□□□□ -0.27
NUP93-220ENST00000569842 POU5F1Q01860 360 aaKnown RBP13.38□□□□□ -0.27
NUP93-220ENST00000569842 ANKRD20A12PQ8NF67 263 aa13.38□□□□□ -0.27
NUP93-220ENST00000569842 TMC2Q8TDI7 906 aa13.38□□□□□ -0.27
NUP93-220ENST00000569842 ZFP42Q96MM3 310 aa13.38□□□□□ -0.27
NUP93-220ENST00000569842 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.38□□□□□ -0.277e-7■■■■■ 30
NUP93-220ENST00000569842 TMEM161AQ9NX61 479 aa13.38□□□□□ -0.27
NUP93-220ENST00000569842 TAB2Q9NYJ8 693 aa13.38□□□□□ -0.27
NUP93-220ENST00000569842 PCDHB7Q9Y5E2 793 aa13.38□□□□□ -0.27
NUP93-220ENST00000569842 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.38□□□□□ -0.27
NUP93-220ENST00000569842 LRRIQ3A6PVS8 624 aaPredicted RBP13.38□□□□□ -0.27
NUP93-220ENST00000569842 IL18RAPO95256 599 aa13.38□□□□□ -0.27
NUP93-220ENST00000569842 TMEM240Q5SV17 173 aa13.38□□□□□ -0.27
NUP93-220ENST00000569842 LMBRD2Q68DH5 695 aaPredicted RBP13.38□□□□□ -0.27
NUP93-220ENST00000569842 PSRC1Q6PGN9 363 aaPredicted RBP13.38□□□□□ -0.27
NUP93-220ENST00000569842 FAM84AQ96KN4 292 aa13.38□□□□□ -0.27
NUP93-220ENST00000569842 GAD1Q99259 594 aa13.38□□□□□ -0.27
NUP93-220ENST00000569842 ELAC1Q9H777 363 aaKnown RBP13.38□□□□□ -0.27
NUP93-220ENST00000569842 RSAD1Q9HA92 442 aa13.38□□□□□ -0.27
NUP93-220ENST00000569842 PLEKHA5Q9HAU0 1116 aa13.38□□□□□ -0.27
NUP93-220ENST00000569842 LIMA1Q9UHB6 759 aaKnown RBP13.38□□□□□ -0.27
NUP93-220ENST00000569842 LRFN2Q9ULH4 789 aa13.38□□□□□ -0.27
NUP93-220ENST00000569842 GIT1Q9Y2X7 761 aa13.38□□□□□ -0.27
NUP93-220ENST00000569842 LTBP2Q14767 1821 aa13.38□□□□□ -0.27
NUP93-220ENST00000569842 GOLGA6L3A6NEY3 463 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 EFCAB14O75071 495 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 BAIAP3O94812 1187 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 MLH1P40692 756 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 WDR5P61964 334 aaKnown RBP13.37□□□□□ -0.27
NUP93-220ENST00000569842 PLCB2Q00722 1185 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 C1orf220Q5T0J3 134 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 ALKAL1Q6UXT8 129 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 USP37Q86T82 979 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 SLC35C1Q96A29 364 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 VPS16Q9H269 839 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 ASB7Q9H672 318 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 ARL5CA6NH57 179 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 ZBBXA8MT70 800 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 UPP2O95045 317 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 SERPINC1P01008 464 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 FGFR1P11362 822 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 TNNI1P19237 187 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 SURF1Q15526 300 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 MAN2A1Q16706 1144 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 GLRA4Q5JXX5 417 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 JADE1Q6IE81 842 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 APTXQ7Z2E3 356 aaKnown RBP13.37□□□□□ -0.27
NUP93-220ENST00000569842 CD302Q8IX05 232 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 MMRN2Q9H8L6 949 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 UBN1Q9NPG3 1134 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 CNTN3Q9P232 1028 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 PTPRJQ12913 1337 aa13.37□□□□□ -0.27
NUP93-220ENST00000569842 CEP290O15078 2479 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 PES1O00541 588 aaKnown RBP13.36□□□□□ -0.27
NUP93-220ENST00000569842 AMHP03971 560 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 NFICP08651 508 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 MAGEA10P43363 369 aaPredicted RBP13.36□□□□□ -0.27
NUP93-220ENST00000569842 AFF1P51825 1210 aaKnown RBP13.36□□□□□ -0.27
NUP93-220ENST00000569842 COPB1P53618 953 aaKnown RBP13.36□□□□□ -0.27
NUP93-220ENST00000569842 DEFB103AP81534 67 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 FANCCQ00597 558 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 GSE1Q14687 1217 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 NPAS4Q8IUM7 802 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 EFCAB13Q8IY85 973 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 CRIPAKQ8N1N5 446 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 ZMAT2Q96NC0 199 aaKnown RBP13.36□□□□□ -0.27
NUP93-220ENST00000569842 CGRRF1Q99675 332 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 INPP5FQ9Y2H2 1132 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 FSD2A1L4K1 749 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 LRRC10BA6NIK2 292 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 KCNJ6P48051 423 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 MCCD1P59942 119 aaPredicted RBP13.36□□□□□ -0.27
NUP93-220ENST00000569842 TFAMQ00059 246 aaKnown RBP13.36□□□□□ -0.27
NUP93-220ENST00000569842 PPP3CAQ08209 521 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 KCNH2Q12809 1159 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 UVSSAQ2YD98 709 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 XKR4Q5GH76 650 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 MIIPQ5JXC2 388 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 CLLU1OSQ5K130 101 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 GLB1LQ6UWU2 654 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 HELQQ8TDG4 1101 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 KIF12Q96FN5 646 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 RPS6KC1Q96S38 1066 aa13.36□□□□□ -0.27
NUP93-220ENST00000569842 SMIM28A0A1B0GU29 152 aa13.35□□□□□ -0.27
NUP93-220ENST00000569842 OFD1O75665 1012 aa13.35□□□□□ -0.27
NUP93-220ENST00000569842 TPM2P07951 284 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms