RNA–Protein interactions for RNA: ENST00000569647.1

CNEP1R1-211, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-211ENST00000569647 SYCP3Q8IZU3 236 aa14.05□□□□□ -0.16
CNEP1R1-211ENST00000569647 CASD1Q96PB1 797 aa14.05□□□□□ -0.16
CNEP1R1-211ENST00000569647 TRIM6Q9C030 488 aaPredicted RBP14.05□□□□□ -0.16
CNEP1R1-211ENST00000569647 TMEM117Q9H0C3 514 aa14.05□□□□□ -0.16
CNEP1R1-211ENST00000569647 GBP3Q9H0R5 595 aa14.05□□□□□ -0.16
CNEP1R1-211ENST00000569647 CWH43Q9H720 699 aa14.05□□□□□ -0.16
CNEP1R1-211ENST00000569647 TYW1Q9NV66 732 aaKnown RBP14.05□□□□□ -0.16
CNEP1R1-211ENST00000569647 MAPK8IP1Q9UQF2 711 aa14.05□□□□□ -0.16
CNEP1R1-211ENST00000569647 HES2Q9Y543 173 aa14.05□□□□□ -0.16
CNEP1R1-211ENST00000569647 PCDHB12Q9Y5F1 795 aa14.05□□□□□ -0.16
CNEP1R1-211ENST00000569647 PDCD11Q14690 1871 aaKnown RBP14.05□□□□□ -0.16
CNEP1R1-211ENST00000569647 ANK1P16157 1881 aa14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 TRIP11Q15643 1979 aa14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 MEIS3P2A8K0S8 358 aa14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 HOXA2O43364 376 aa14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 KIF20AO95235 890 aa14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 CD44P16070 742 aaKnown RBP14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 GARTP22102 1010 aa14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 GRM5P41594 1212 aa14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 SNRPFP62306 86 aaKnown RBP14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 ZCWPW2Q504Y3 356 aa14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 CLLU1OSQ5K130 101 aa14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 SLFN12LQ6IEE8 588 aa14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 LRRC55Q6ZSA7 311 aa14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 ADSSL1Q8N142 457 aa14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 CEP120Q8N960 986 aa14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 COLGALT1Q8NBJ5 622 aa14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 RNF169Q8NCN4 708 aa14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 POF1BQ8WVV4 589 aa14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 LPPQ93052 612 aa14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 PABPC5Q96DU9 382 aaKnown RBP14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 CBWD1Q9BRT8 395 aa14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 TCHPQ9BT92 498 aa14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 RNF39Q9H2S5 420 aa14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 AAASQ9NRG9 546 aa14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 AGPAT3Q9NRZ7 376 aa14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 CGNQ9P2M7 1197 aaKnown RBP14.04□□□□□ -0.16
CNEP1R1-211ENST00000569647 PPP1R3GB7ZBB8 358 aa14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 H3BQ06 376 aaPredicted RBP14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 PDXKO00764 312 aa14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 OGTO15294 1046 aa14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 INPPL1O15357 1258 aa14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 HARSP12081 509 aaKnown RBP14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 ITGA4P13612 1032 aa14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 IRS1P35568 1242 aa14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 HYAL1Q12794 435 aa14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 CTC1Q2NKJ3 1217 aa14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 SKOR2Q2VWA4 1001 aaPredicted RBP14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 ARMCX5Q6P1M9 558 aa14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 C12orf56Q8IXR9 622 aa14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 ABI1Q8IZP0 508 aa14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 TMEM174Q8WUU8 243 aa14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 POMGNT1Q8WZA1 660 aa14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 SYAP1Q96A49 352 aaPredicted RBP14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 PGBD4Q96DM1 585 aa14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 MSTO1Q9BUK6 570 aa14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 CLDND1Q9NY35 253 aa14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 SNTG2Q9NY99 539 aa14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 TRAF3IP3Q9Y228 551 aa14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 TDRD15B5MCY1 1934 aaKnown RBP14.03□□□□□ -0.16
CNEP1R1-211ENST00000569647 MEFVO15553 781 aaPredicted RBP14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 NCK2O43639 380 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 FGF18O76093 207 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 RECQL4O94761 1208 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 LAG3P18627 525 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 GTF2F1P35269 517 aaKnown RBP eCLIP14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 LTBRP36941 435 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 PPP1R2P41236 205 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 MATR3P43243 847 aaKnown RBP eCLIP14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 UBE3AQ05086 875 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 NFIL3Q16649 462 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 KYAT1Q16773 422 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 SEZ6Q53EL9 994 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 ZBTB41Q5SVQ8 909 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 CENPPQ6IPU0 288 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 CRELD2Q6UXH1 353 aaPredicted RBP14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 EP400NLQ6ZTU2 488 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 HS2ST1Q7LGA3 356 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 ADGRD2Q7Z7M1 963 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 THNSL1Q8IYQ7 743 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 HACE1Q8IYU2 909 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 LRRC43Q8N309 656 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 ZSWIM2Q8NEG5 633 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 GOLGA5Q8TBA6 731 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 HELQQ8TDG4 1101 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 APOL6Q9BWW8 343 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 RSAD1Q9HA92 442 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 CPSF3Q9UKF6 684 aaKnown RBP14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 AGO2Q9UKV8 859 aaKnown RBP14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 GIT1Q9Y2X7 761 aa14.02□□□□□ -0.17
CNEP1R1-211ENST00000569647 WDFY4Q6ZS81 3184 aa14.01□□□□□ -0.17
CNEP1R1-211ENST00000569647 PSMA7O14818 248 aa14.01□□□□□ -0.17
CNEP1R1-211ENST00000569647 KIAA0391O15091 583 aaKnown RBP14.01□□□□□ -0.17
CNEP1R1-211ENST00000569647 CLIC2O15247 247 aa14.01□□□□□ -0.17
CNEP1R1-211ENST00000569647 OFD1O75665 1012 aa14.01□□□□□ -0.17
CNEP1R1-211ENST00000569647 CLTAP09496 248 aa14.01□□□□□ -0.17
CNEP1R1-211ENST00000569647 AKAP5P24588 427 aa14.01□□□□□ -0.17
CNEP1R1-211ENST00000569647 CCNE1P24864 410 aa14.01□□□□□ -0.17
CNEP1R1-211ENST00000569647 PBX3P40426 434 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms