RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 PDIA4P13667 645 aaKnown RBP9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 IL9P15248 144 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 PFKFB1P16118 471 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 PPM1AP35813 382 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 CASP5P51878 434 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 MRPS5P82675 430 aaKnown RBP9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 PLCB3Q01970 1234 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 GRIK3Q13003 919 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 CSPP1Q1MSJ5 1256 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 RESP18Q5W5W9 173 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 KANK3Q6NY19 840 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 SYCP3Q8IZU3 236 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 KCTD17Q8N5Z5 321 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 FSIP1Q8NA03 581 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 IQUBQ8NA54 791 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 GLIS3Q8NEA6 775 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 DNAJC19Q96DA6 116 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 ASB2Q96Q27 587 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 NTPCRQ9BSD7 190 aaKnown RBP9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 MSTO1Q9BUK6 570 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 C17orf75Q9HAS0 396 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 PTPRHQ9HD43 1115 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 KCNH3Q9ULD8 1083 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 PRUNE2Q8WUY3 3088 aa9.87□□□□□ -0.83
GTF3C1-210ENST00000569394 GOLGA8IPA6NC78 632 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 GOLGA8JA6NMD2 632 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 TBX10O75333 385 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 NR1I2O75469 434 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 TOM1L1O75674 476 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 WEE2P0C1S8 567 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 SPATA31D3P0C874 917 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 CXCL8P10145 99 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 MCF2P10911 925 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 RPL17P18621 184 aaKnown RBP9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 SP100P23497 879 aaPredicted RBP9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 ACOT2P49753 483 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 CLCNKBP51801 687 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 GUCY2FP51841 1108 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 ZNF131P52739 623 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 COASYQ13057 564 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 CUL4BQ13620 913 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 SMC1AQ14683 1233 aaKnown RBP9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 NOLC1Q14978 699 aaKnown RBP eCLIP9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 KIAA1841Q6NSI8 718 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 FAM43BQ6ZT52 329 aaPredicted RBP9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 SPATA31D4Q6ZUB0 917 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 APBB1IPQ7Z5R6 666 aaPredicted RBP9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 CEP57L1Q8IYX8 460 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 ZSWIM2Q8NEG5 633 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 VN1R2Q8NFZ6 395 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 PPP2R3CQ969Q6 453 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 C18orf25Q96B23 403 aaPredicted RBP9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 FIZ1Q96SL8 496 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 COLEC11Q9BWP8 271 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 GPR62Q9BZJ7 368 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 PCIF1Q9H4Z3 704 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 SLC24A3Q9HC58 644 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 CDH22Q9UJ99 828 aa9.86□□□□□ -0.83
GTF3C1-210ENST00000569394 SMIM28A0A1B0GU29 152 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 C2orf71A6NGG8 1288 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 H0YCG3 227 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 ABLIM1O14639 778 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 FSCN2O14926 492 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 MEFVO15553 781 aaPredicted RBP9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 KIF4AO95239 1232 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 GAP43P17677 238 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 LTBRP36941 435 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 GRM5P41594 1212 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 BRCC3P46736 316 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 CDR1P51861 262 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 NDUFA8P51970 172 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 NUCB2P80303 420 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 UBE3AQ05086 875 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 SOX4Q06945 474 aaPredicted RBP9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 TUSC3Q13454 348 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 HSP90AA2PQ14568 343 aaPredicted RBP9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 TJAP1Q5JTD0 557 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 FAM171A1Q5VUB5 890 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 ATL3Q6DD88 541 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 ADALQ6DHV7 355 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 PTCRAQ6ISU1 281 aaPredicted RBP9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 SLC39A4Q6P5W5 647 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 PRSS55Q6UWB4 352 aaPredicted RBP9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 ZNF720Q7Z2F6 126 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 DDX53Q86TM3 631 aaKnown RBP9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 PALB2Q86YC2 1186 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 NELFCDQ8IXH7 590 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 CCDC65Q8IXS2 484 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 C12orf76Q8N812 135 aaPredicted RBP9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 ATXN2LQ8WWM7 1075 aaKnown RBP9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 RIN2Q8WYP3 895 aaPredicted RBP9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 POMGNT1Q8WZA1 660 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 PABPC5Q96DU9 382 aaKnown RBP9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 SAAL1Q96ER3 474 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 FAM84AQ96KN4 292 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 ZMAT2Q96NC0 199 aaKnown RBP9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 TMEM175Q9BSA9 504 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 ZBP1Q9H171 429 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 GOLPH3LQ9H4A5 285 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms