RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 ENOX2Q16206 610 aaKnown RBP9.91□□□□□ -0.82
CHD9-219ENST00000569225 XKR4Q5GH76 650 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 ZBTB41Q5SVQ8 909 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 CENPPQ6IPU0 288 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 RBM43Q6ZSC3 357 aaKnown RBP9.91□□□□□ -0.82
CHD9-219ENST00000569225 TMEM192Q8IY95 271 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 CLP1Q92989 425 aaKnown RBP9.91□□□□□ -0.82
CHD9-219ENST00000569225 P2RX5Q93086 422 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 ZNF558Q96NG5 402 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 TMEM175Q9BSA9 504 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 ASB7Q9H672 318 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 CNTN3Q9P232 1028 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 FRMD4BQ9Y2L6 1034 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 PCDHB12Q9Y5F1 795 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 TTC3P53804 2025 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 SMIM28A0A1B0GU29 152 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 TTC26A0AVF1 554 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 GOLGA8IPA6NC78 632 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 GOLGA8JA6NMD2 632 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 PPP1R3GB7ZBB8 358 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 CETN3O15182 167 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 BMP6P22004 513 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 NR2F2P24468 414 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 CCNE1P24864 410 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 PPM1AP35813 382 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 TNFSF9P41273 254 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 ALDH7A1P49419 539 aaKnown RBP9.91□□□□□ -0.82
CHD9-219ENST00000569225 NLRP12P59046 1061 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 TAP1Q03518 808 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 PAK1Q13153 545 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 SNRNP35Q16560 246 aaKnown RBP9.91□□□□□ -0.82
CHD9-219ENST00000569225 SLC10A6Q3KNW5 377 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 ZCWPW2Q504Y3 356 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 CT47A1Q5JQC4 288 aaPredicted RBP9.91□□□□□ -0.82
CHD9-219ENST00000569225 KLHL10Q6JEL2 608 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 GPR153Q6NV75 609 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 FOXR2Q6PJQ5 311 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 ALKAL1Q6UXT8 129 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 USP37Q86T82 979 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 BRSK2Q8IWQ3 736 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 NELFBQ8WX92 580 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 FAM212AQ96EL1 285 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 FBXL18Q96ME1 805 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 PLVAPQ9BX97 442 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 SEMA6BQ9H3T3 888 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 DERAQ9Y315 318 aa9.91□□□□□ -0.82
CHD9-219ENST00000569225 MYH11P35749 1972 aa9.9□□□□□ -0.82
CHD9-219ENST00000569225 LACTBL1A8MY62 500 aa9.9□□□□□ -0.82
CHD9-219ENST00000569225 TULP1O00294 542 aaPredicted RBP9.9□□□□□ -0.82
CHD9-219ENST00000569225 PTGESO14684 152 aa9.9□□□□□ -0.82
CHD9-219ENST00000569225 ZC3H11AO75152 810 aaKnown RBP eCLIP9.9□□□□□ -0.82
CHD9-219ENST00000569225 RB1P06400 928 aa9.9□□□□□ -0.82
CHD9-219ENST00000569225 ADRB2P07550 413 aa9.9□□□□□ -0.82
CHD9-219ENST00000569225 CTNNB1P35222 781 aa9.9□□□□□ -0.82
CHD9-219ENST00000569225 BMPR1AP36894 532 aa9.9□□□□□ -0.82
CHD9-219ENST00000569225 ERVK-21P61565 698 aa9.9□□□□□ -0.82
CHD9-219ENST00000569225 FKBP3Q00688 224 aaKnown RBP9.9□□□□□ -0.82
CHD9-219ENST00000569225 ADAM9Q13443 819 aa9.9□□□□□ -0.82
CHD9-219ENST00000569225 TUSC3Q13454 348 aa9.9□□□□□ -0.82
CHD9-219ENST00000569225 NFKBIBQ15653 356 aa9.9□□□□□ -0.82
CHD9-219ENST00000569225 ZNF697Q5TEC3 545 aa9.9□□□□□ -0.82
CHD9-219ENST00000569225 CRELD2Q6UXH1 353 aaPredicted RBP9.9□□□□□ -0.82
CHD9-219ENST00000569225 LRRC55Q6ZSA7 311 aa9.9□□□□□ -0.82
CHD9-219ENST00000569225 NT5DC4Q86YG4 428 aa9.9□□□□□ -0.82
CHD9-219ENST00000569225 GSTCDQ8NEC7 633 aa9.9□□□□□ -0.82
CHD9-219ENST00000569225 KIF12Q96FN5 646 aa9.9□□□□□ -0.82
CHD9-219ENST00000569225 UROC1Q96N76 676 aa9.9□□□□□ -0.82
CHD9-219ENST00000569225 C11orf84Q9BUA3 381 aaPredicted RBP9.9□□□□□ -0.82
CHD9-219ENST00000569225 ANO10Q9NW15 660 aa9.9□□□□□ -0.82
CHD9-219ENST00000569225 DMAC2Q9NW81 257 aa9.9□□□□□ -0.82
CHD9-219ENST00000569225 TMEM63CQ9P1W3 806 aa9.9□□□□□ -0.82
CHD9-219ENST00000569225 CTNND2Q9UQB3 1225 aa9.9□□□□□ -0.82
CHD9-219ENST00000569225 C2CD2Q9Y426 696 aa9.9□□□□□ -0.82
CHD9-219ENST00000569225 SOX1O00570 391 aaPredicted RBP9.89□□□□□ -0.83
CHD9-219ENST00000569225 MAPK13O15264 365 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 FGFR1OPO95684 399 aaKnown RBP9.89□□□□□ -0.83
CHD9-219ENST00000569225 ALDH2P05091 517 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 CD44P16070 742 aaKnown RBP9.89□□□□□ -0.83
CHD9-219ENST00000569225 PSMC2P35998 433 aaKnown RBP9.89□□□□□ -0.83
CHD9-219ENST00000569225 AFF1P51825 1210 aaKnown RBP9.89□□□□□ -0.83
CHD9-219ENST00000569225 DSC1Q08554 894 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 TMEM132DQ14C87 1099 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 STX1AQ16623 288 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 GLRA4Q5JXX5 417 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 CEP135Q66GS9 1140 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 KCNT2Q6UVM3 1135 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 CBWD2Q8IUF1 395 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 COLGALT1Q8NBJ5 622 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 FBXO22Q8NEZ5 403 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 BEST2Q8NFU1 509 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 CACTINQ8WUQ7 758 aaKnown RBP9.89□□□□□ -0.83
CHD9-219ENST00000569225 DDX27Q96GQ7 796 aaKnown RBP9.89□□□□□ -0.83
CHD9-219ENST00000569225 PPP1R10Q96QC0 940 aaKnown RBP9.89□□□□□ -0.83
CHD9-219ENST00000569225 FNBP1Q96RU3 617 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 COLEC11Q9BWP8 271 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 ZNF576Q9H609 170 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 CWH43Q9H720 699 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 NRDE2Q9H7Z3 1164 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 STK39Q9UEW8 545 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 RWDD2AQ9UIY3 292 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms