RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 PDXDC1Q6P996 788 aa16.61■□□□□ 0.25
COMMD4-223ENST00000568301 PADI6Q6TGC4 694 aa16.61■□□□□ 0.25
COMMD4-223ENST00000568301 PRSS55Q6UWB4 352 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-223ENST00000568301 C1orf210Q8IVY1 113 aa16.61■□□□□ 0.25
COMMD4-223ENST00000568301 LNX1Q8TBB1 728 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-223ENST00000568301 CLSTN3Q9BQT9 956 aa16.61■□□□□ 0.25
COMMD4-223ENST00000568301 ADPGKQ9BRR6 497 aa16.61■□□□□ 0.25
COMMD4-223ENST00000568301 RPP25Q9BUL9 199 aaKnown RBP16.61■□□□□ 0.25
COMMD4-223ENST00000568301 FOXQ1Q9C009 403 aa16.61■□□□□ 0.25
COMMD4-223ENST00000568301 PDZD7Q9H5P4 517 aa16.61■□□□□ 0.25
COMMD4-223ENST00000568301 SNTG2Q9NY99 539 aa16.61■□□□□ 0.25
COMMD4-223ENST00000568301 NUMBLQ9Y6R0 609 aa16.61■□□□□ 0.25
COMMD4-223ENST00000568301 TRIP11Q15643 1979 aa16.6■□□□□ 0.25
COMMD4-223ENST00000568301 CEP250Q9BV73 2442 aa16.6■□□□□ 0.25
COMMD4-223ENST00000568301 TTLL13PA6NNM8 815 aa16.6■□□□□ 0.25
COMMD4-223ENST00000568301 NAMPTP43490 491 aa16.6■□□□□ 0.25
COMMD4-223ENST00000568301 FOSBP53539 338 aa16.6■□□□□ 0.25
COMMD4-223ENST00000568301 PPP2R5AQ15172 486 aa16.6■□□□□ 0.25
COMMD4-223ENST00000568301 NAB2Q15742 525 aa16.6■□□□□ 0.25
COMMD4-223ENST00000568301 DCLRE1AQ6PJP8 1040 aa16.6■□□□□ 0.25
COMMD4-223ENST00000568301 DGLUCYQ7Z3D6 616 aa16.6■□□□□ 0.25
COMMD4-223ENST00000568301 DCLK2Q8N568 766 aa16.6■□□□□ 0.25
COMMD4-223ENST00000568301 BSNDQ8WZ55 320 aa16.6■□□□□ 0.25
COMMD4-223ENST00000568301 CCDC113Q9H0I3 377 aa16.6■□□□□ 0.25
COMMD4-223ENST00000568301 SLC2A4RGQ9NR83 387 aa16.6■□□□□ 0.25
COMMD4-223ENST00000568301 CACNG4Q9UBN1 327 aa16.6■□□□□ 0.25
COMMD4-223ENST00000568301 FBXW11Q9UKB1 542 aa16.6■□□□□ 0.25
COMMD4-223ENST00000568301 VWA8A3KMH1 1905 aa16.59■□□□□ 0.25
COMMD4-223ENST00000568301 ARHGEF35A5YM69 484 aa16.59■□□□□ 0.25
COMMD4-223ENST00000568301 CASTOR2A6NHX0 329 aa16.59■□□□□ 0.25
COMMD4-223ENST00000568301 LRRN2O75325 713 aa16.59■□□□□ 0.25
COMMD4-223ENST00000568301 RECQL4O94761 1208 aa16.59■□□□□ 0.25
COMMD4-223ENST00000568301 KIF4AO95239 1232 aa16.59■□□□□ 0.25
COMMD4-223ENST00000568301 PRKCBP05771 671 aa16.59■□□□□ 0.25
COMMD4-223ENST00000568301 OR52Z1P0C646 297 aa16.59■□□□□ 0.25
COMMD4-223ENST00000568301 FSHRP23945 695 aa16.59■□□□□ 0.25
COMMD4-223ENST00000568301 HOXA9P31269 272 aa16.59■□□□□ 0.25
COMMD4-223ENST00000568301 EFNA5P52803 228 aa16.59■□□□□ 0.25
COMMD4-223ENST00000568301 PSMD5Q16401 504 aa16.59■□□□□ 0.25
COMMD4-223ENST00000568301 TMEM132AQ24JP5 1023 aa16.59■□□□□ 0.25
COMMD4-223ENST00000568301 CEP57Q86XR8 500 aa16.59■□□□□ 0.25
COMMD4-223ENST00000568301 NOSTRINQ8IVI9 506 aa16.59■□□□□ 0.25
COMMD4-223ENST00000568301 PJA1Q8NG27 643 aa16.59■□□□□ 0.25
COMMD4-223ENST00000568301 DEPTORQ8TB45 409 aa16.59■□□□□ 0.25
COMMD4-223ENST00000568301 HINFPQ9BQA5 517 aa16.59■□□□□ 0.25
COMMD4-223ENST00000568301 FOXP1Q9H334 677 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-223ENST00000568301 NCOR2Q9Y618 2525 aa16.58■□□□□ 0.25
COMMD4-223ENST00000568301 RBM25P49756 843 aaKnown RBP16.58■□□□□ 0.24
COMMD4-223ENST00000568301 GPC5P78333 572 aa16.58■□□□□ 0.24
COMMD4-223ENST00000568301 UVSSAQ2YD98 709 aa16.58■□□□□ 0.24
COMMD4-223ENST00000568301 DCAF4L1Q3SXM0 396 aa16.58■□□□□ 0.24
COMMD4-223ENST00000568301 PPM1LQ5SGD2 360 aa16.58■□□□□ 0.24
COMMD4-223ENST00000568301 LIN9Q5TKA1 542 aa16.58■□□□□ 0.24
COMMD4-223ENST00000568301 ZC3H14Q6PJT7 736 aaKnown RBP16.58■□□□□ 0.24
COMMD4-223ENST00000568301 PARM1Q6UWI2 310 aa16.58■□□□□ 0.24
COMMD4-223ENST00000568301 RTL10Q7L3V2 364 aa16.58■□□□□ 0.24
COMMD4-223ENST00000568301 GRASPQ7Z6J2 395 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-223ENST00000568301 MAML2Q8IZL2 1156 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-223ENST00000568301 HASPINQ8TF76 798 aa16.58■□□□□ 0.24
COMMD4-223ENST00000568301 FGF14Q92915 247 aa16.58■□□□□ 0.24
COMMD4-223ENST00000568301 LLPHQ9BRT6 129 aaKnown RBP16.58■□□□□ 0.24
COMMD4-223ENST00000568301 CXCL16Q9H2A7 254 aa16.58■□□□□ 0.24
COMMD4-223ENST00000568301 COL4A3Q01955 1670 aa16.58■□□□□ 0.24
COMMD4-223ENST00000568301 MYH15Q9Y2K3 1946 aa16.58■□□□□ 0.24
COMMD4-223ENST00000568301 TMEM189-UBE2V1I3L0A0 370 aa16.57■□□□□ 0.24
COMMD4-223ENST00000568301 XYLBO75191 536 aa16.57■□□□□ 0.24
COMMD4-223ENST00000568301 NEFLP07196 543 aa16.57■□□□□ 0.24
COMMD4-223ENST00000568301 C8AP07357 584 aa16.57■□□□□ 0.24
COMMD4-223ENST00000568301 POU2F2P09086 479 aa16.57■□□□□ 0.24
COMMD4-223ENST00000568301 STARD6P59095 220 aa16.57■□□□□ 0.24
COMMD4-223ENST00000568301 NTHL1P78549 312 aa16.57■□□□□ 0.24
COMMD4-223ENST00000568301 GUCY1B3Q02153 619 aa16.57■□□□□ 0.24
COMMD4-223ENST00000568301 ST3GAL1Q11201 340 aa16.57■□□□□ 0.24
COMMD4-223ENST00000568301 RAB33AQ14088 237 aa16.57■□□□□ 0.24
COMMD4-223ENST00000568301 ZNF174Q15697 407 aa16.57■□□□□ 0.24
COMMD4-223ENST00000568301 HAUS3Q68CZ6 603 aa16.57■□□□□ 0.24
COMMD4-223ENST00000568301 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.57■□□□□ 0.24
COMMD4-223ENST00000568301 APBB1IPQ7Z5R6 666 aaPredicted RBP16.57■□□□□ 0.24
COMMD4-223ENST00000568301 RUBCNQ92622 972 aa16.57■□□□□ 0.24
COMMD4-223ENST00000568301 KIFAP3Q92845 792 aa16.57■□□□□ 0.24
COMMD4-223ENST00000568301 C8orf76Q96K31 380 aa16.57■□□□□ 0.24
COMMD4-223ENST00000568301 IFT74Q96LB3 600 aa16.57■□□□□ 0.24
COMMD4-223ENST00000568301 CDH7Q9ULB5 785 aa16.57■□□□□ 0.24
COMMD4-223ENST00000568301 LIMCH1Q9UPQ0 1083 aa16.57■□□□□ 0.24
COMMD4-223ENST00000568301 GPR179Q6PRD1 2367 aa16.57■□□□□ 0.24
COMMD4-223ENST00000568301 EDN1P05305 212 aa16.56■□□□□ 0.24
COMMD4-223ENST00000568301 FGFR3P22607 806 aa16.56■□□□□ 0.24
COMMD4-223ENST00000568301 TRAPPC10P48553 1259 aa16.56■□□□□ 0.24
COMMD4-223ENST00000568301 FXR2P51116 673 aaKnown RBP eCLIP16.56■□□□□ 0.24
COMMD4-223ENST00000568301 SNW1Q13573 536 aaKnown RBP16.56■□□□□ 0.24
COMMD4-223ENST00000568301 PUM1Q14671 1186 aaKnown RBP eCLIP16.56■□□□□ 0.24
COMMD4-223ENST00000568301 EEF1DP3Q658K8 133 aa16.56■□□□□ 0.24
COMMD4-223ENST00000568301 FBXO18Q8NFZ0 1043 aa16.56■□□□□ 0.24
COMMD4-223ENST00000568301 FGF13Q92913 245 aa16.56■□□□□ 0.24
COMMD4-223ENST00000568301 SHDQ96IW2 340 aa16.56■□□□□ 0.24
COMMD4-223ENST00000568301 PPP1R10Q96QC0 940 aaKnown RBP16.56■□□□□ 0.24
COMMD4-223ENST00000568301 USP20Q9Y2K6 914 aa16.56■□□□□ 0.24
COMMD4-223ENST00000568301 GDAQ9Y2T3 454 aa16.56■□□□□ 0.24
COMMD4-223ENST00000568301 MIA3Q5JRA6 1907 aa16.56■□□□□ 0.24
COMMD4-223ENST00000568301 NOTCH4Q99466 2003 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms