RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 KREMEN1Q96MU8 473 aa12.67□□□□□ -0.38
BBS4-213ENST00000567279 C1orf112Q9NSG2 853 aa12.67□□□□□ -0.38
BBS4-213ENST00000567279 TNFSF13BQ9Y275 285 aa12.67□□□□□ -0.38
BBS4-213ENST00000567279 NRCAMQ92823 1304 aa12.67□□□□□ -0.38
BBS4-213ENST00000567279 SLU7O95391 586 aaKnown RBP12.66□□□□□ -0.38
BBS4-213ENST00000567279 C4BPAP04003 597 aaKnown RBP12.66□□□□□ -0.38
BBS4-213ENST00000567279 CYP2C9P11712 490 aa12.66□□□□□ -0.38
BBS4-213ENST00000567279 OSTNP61366 133 aa12.66□□□□□ -0.38
BBS4-213ENST00000567279 TMEM62Q0P6H9 643 aa12.66□□□□□ -0.38
BBS4-213ENST00000567279 KIF22Q14807 665 aa12.66□□□□□ -0.38
BBS4-213ENST00000567279 AMHR2Q16671 573 aa12.66□□□□□ -0.38
BBS4-213ENST00000567279 ZNF410Q86VK4 478 aa12.66□□□□□ -0.38
BBS4-213ENST00000567279 CEP120Q8N960 986 aa12.66□□□□□ -0.38
BBS4-213ENST00000567279 OR5B17Q8NGF7 314 aa12.66□□□□□ -0.38
BBS4-213ENST00000567279 LNX1Q8TBB1 728 aaPredicted RBP12.66□□□□□ -0.38
BBS4-213ENST00000567279 HELQQ8TDG4 1101 aa12.66□□□□□ -0.38
BBS4-213ENST00000567279 U2AF1L4Q8WU68 220 aaKnown RBP12.66□□□□□ -0.38
BBS4-213ENST00000567279 CPB2Q96IY4 423 aa12.66□□□□□ -0.38
BBS4-213ENST00000567279 PACSIN1Q9BY11 444 aa12.66□□□□□ -0.38
BBS4-213ENST00000567279 PTPRHQ9HD43 1115 aa12.66□□□□□ -0.38
BBS4-213ENST00000567279 CPSF3Q9UKF6 684 aaKnown RBP12.66□□□□□ -0.38
BBS4-213ENST00000567279 MYADML2A6NDP7 307 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 HAS3O00219 553 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 PHACTR2O75167 634 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 DUSP11O75319 330 aaKnown RBP12.65□□□□□ -0.38
BBS4-213ENST00000567279 ERLIN2O94905 339 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 VNN1O95497 513 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 C6orf222P0C671 652 aaPredicted RBP12.65□□□□□ -0.38
BBS4-213ENST00000567279 BMS1Q14692 1282 aaKnown RBP12.65□□□□□ -0.38
BBS4-213ENST00000567279 KIZQ2M2Z5 673 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 WDR44Q5JSH3 913 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 ALKBH5Q6P6C2 394 aaKnown RBP12.65□□□□□ -0.38
BBS4-213ENST00000567279 RUFY4Q6ZNE9 571 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 WDR49Q8IV35 697 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 TATDN2Q93075 761 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 KATNAL1Q9BW62 490 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 PDZD7Q9H5P4 517 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 SEPT11Q9NVA2 429 aaKnown RBP12.65□□□□□ -0.38
BBS4-213ENST00000567279 NAGPAQ9UK23 515 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 GINS2Q9Y248 185 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 MRFAP1Q9Y605 127 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 TRIP12Q14669 1992 aaPredicted RBP12.65□□□□□ -0.38
BBS4-213ENST00000567279 SMIM35A0A1B0GVV1 85 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 DDX3XO00571 662 aaKnown RBP eCLIP12.65□□□□□ -0.38
BBS4-213ENST00000567279 ZC3H11AO75152 810 aaKnown RBP eCLIP12.65□□□□□ -0.38
BBS4-213ENST00000567279 TACC1O75410 805 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 MOCS3O95396 460 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 PURAQ00577 322 aaKnown RBP12.65□□□□□ -0.38
BBS4-213ENST00000567279 SP3Q02447 781 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 TRIM32Q13049 653 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 SURF1Q15526 300 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 NAB2Q15742 525 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 C10orf76Q5T2E6 689 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 SRGAP1Q7Z6B7 1085 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 GLYCTKQ8IVS8 523 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 SLC20A1Q8WUM9 679 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 SHC3Q92529 594 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 TSC1Q92574 1164 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 CREBZFQ9NS37 354 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 CAPN6Q9Y6Q1 641 aa12.65□□□□□ -0.38
BBS4-213ENST00000567279 BUB1O43683 1085 aa12.64□□□□□ -0.39
BBS4-213ENST00000567279 TSPAN1O60635 241 aa12.64□□□□□ -0.39
BBS4-213ENST00000567279 MCF2P10911 925 aa12.64□□□□□ -0.39
BBS4-213ENST00000567279 ARF4P18085 180 aaPredicted RBP12.64□□□□□ -0.39
BBS4-213ENST00000567279 TNFAIP3P21580 790 aa12.64□□□□□ -0.39
BBS4-213ENST00000567279 FGFR4P22455 802 aa12.64□□□□□ -0.39
BBS4-213ENST00000567279 CAP1Q01518 475 aa12.64□□□□□ -0.39
BBS4-213ENST00000567279 HIC1Q14526 733 aa12.64□□□□□ -0.39
BBS4-213ENST00000567279 SPOPLQ6IQ16 392 aa12.64□□□□□ -0.39
BBS4-213ENST00000567279 DNAAF5Q86Y56 855 aa12.64□□□□□ -0.39
BBS4-213ENST00000567279 REM2Q8IYK8 340 aaPredicted RBP12.64□□□□□ -0.39
BBS4-213ENST00000567279 OLIG1Q8TAK6 271 aa12.64□□□□□ -0.39
BBS4-213ENST00000567279 DHX38Q92620 1227 aaKnown RBP12.64□□□□□ -0.39
BBS4-213ENST00000567279 ALS2CR12Q96Q35 445 aa12.64□□□□□ -0.39
BBS4-213ENST00000567279 SYT11Q9BT88 431 aa12.64□□□□□ -0.39
BBS4-213ENST00000567279 MTMR12Q9C0I1 747 aa12.64□□□□□ -0.39
BBS4-213ENST00000567279 RPF1Q9H9Y2 349 aaKnown RBP12.64□□□□□ -0.39
BBS4-213ENST00000567279 NENFQ9UMX5 172 aa12.64□□□□□ -0.39
BBS4-213ENST00000567279 C17orf102A2RUQ5 167 aa12.63□□□□□ -0.39
BBS4-213ENST00000567279 MBLAC1A4D2B0 266 aaPredicted RBP12.63□□□□□ -0.39
BBS4-213ENST00000567279 GPR25O00155 361 aa12.63□□□□□ -0.39
BBS4-213ENST00000567279 DYNC1I1O14576 645 aa12.63□□□□□ -0.39
BBS4-213ENST00000567279 ENC1O14682 589 aa12.63□□□□□ -0.39
BBS4-213ENST00000567279 TREHO43280 583 aa12.63□□□□□ -0.39
BBS4-213ENST00000567279 SGPL1O95470 568 aa12.63□□□□□ -0.39
BBS4-213ENST00000567279 TMEM191BP0C7N4 346 aa12.63□□□□□ -0.39
BBS4-213ENST00000567279 CXCL8P10145 99 aa12.63□□□□□ -0.39
BBS4-213ENST00000567279 KRT5P13647 590 aa12.63□□□□□ -0.39
BBS4-213ENST00000567279 AP3M2P53677 418 aa12.63□□□□□ -0.39
BBS4-213ENST00000567279 NAP1L1P55209 391 aaKnown RBP12.63□□□□□ -0.39
BBS4-213ENST00000567279 GJA9P57773 515 aa12.63□□□□□ -0.39
BBS4-213ENST00000567279 ZNF200P98182 395 aaPredicted RBP12.63□□□□□ -0.39
BBS4-213ENST00000567279 TFAMQ00059 246 aaKnown RBP12.63□□□□□ -0.39
BBS4-213ENST00000567279 GCNT1Q02742 428 aa12.63□□□□□ -0.39
BBS4-213ENST00000567279 ENOSF1Q7L5Y1 443 aa12.63□□□□□ -0.39
BBS4-213ENST00000567279 TMEM192Q8IY95 271 aa12.63□□□□□ -0.39
BBS4-213ENST00000567279 FAM71AQ8IYT1 594 aa12.63□□□□□ -0.39
BBS4-213ENST00000567279 MNS1Q8NEH6 495 aa12.63□□□□□ -0.39
BBS4-213ENST00000567279 TRIM58Q8NG06 486 aa12.63□□□□□ -0.39
BBS4-213ENST00000567279 ERO1AQ96HE7 468 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms