RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 RBM23Q86U06 439 aaKnown RBP14.68□□□□□ -0.06
CLK3-218ENST00000566926 FAM178BQ8IXR5 827 aa14.68□□□□□ -0.06
CLK3-218ENST00000566926 VPS52Q8N1B4 723 aa14.68□□□□□ -0.06
CLK3-218ENST00000566926 PDILTQ8N807 584 aa14.68□□□□□ -0.06
CLK3-218ENST00000566926 TRIML1Q8N9V2 468 aa14.68□□□□□ -0.06
CLK3-218ENST00000566926 BICD1Q96G01 975 aa14.68□□□□□ -0.06
CLK3-218ENST00000566926 PTPRHQ9HD43 1115 aa14.68□□□□□ -0.06
CLK3-218ENST00000566926 SEL1LQ9UBV2 794 aa14.68□□□□□ -0.06
CLK3-218ENST00000566926 SSX2IPQ9Y2D8 614 aa14.68□□□□□ -0.06
CLK3-218ENST00000566926 USP20Q9Y2K6 914 aa14.68□□□□□ -0.06
CLK3-218ENST00000566926 GOLGA6L3A6NEY3 463 aa14.67□□□□□ -0.06
CLK3-218ENST00000566926 CLDN3O15551 220 aa14.67□□□□□ -0.06
CLK3-218ENST00000566926 CXCL14O95715 111 aa14.67□□□□□ -0.06
CLK3-218ENST00000566926 CTSAP10619 480 aa14.67□□□□□ -0.06
CLK3-218ENST00000566926 BMP1P13497 986 aa14.67□□□□□ -0.06
CLK3-218ENST00000566926 GAP43P17677 238 aa14.67□□□□□ -0.06
CLK3-218ENST00000566926 PROZP22891 400 aa14.67□□□□□ -0.06
CLK3-218ENST00000566926 CA8P35219 290 aa14.67□□□□□ -0.06
CLK3-218ENST00000566926 TUSC3Q13454 348 aa14.67□□□□□ -0.06
CLK3-218ENST00000566926 STX1AQ16623 288 aa14.67□□□□□ -0.06
CLK3-218ENST00000566926 KYAT1Q16773 422 aa14.67□□□□□ -0.06
CLK3-218ENST00000566926 ADGRD2Q7Z7M1 963 aa14.67□□□□□ -0.06
CLK3-218ENST00000566926 MRPL43Q8N983 215 aaKnown RBP14.67□□□□□ -0.06
CLK3-218ENST00000566926 GSTCDQ8NEC7 633 aa14.67□□□□□ -0.06
CLK3-218ENST00000566926 DDX12PQ92771 950 aa14.67□□□□□ -0.06
CLK3-218ENST00000566926 COL25A1Q9BXS0 654 aaPredicted RBP14.67□□□□□ -0.06
CLK3-218ENST00000566926 PANK2Q9BZ23 570 aa14.67□□□□□ -0.06
CLK3-218ENST00000566926 NAT10Q9H0A0 1025 aaKnown RBP14.67□□□□□ -0.06
CLK3-218ENST00000566926 CDT1Q9H211 546 aa14.67□□□□□ -0.06
CLK3-218ENST00000566926 ANO10Q9NW15 660 aa14.67□□□□□ -0.06
CLK3-218ENST00000566926 SERTAD1Q9UHV2 236 aa14.67□□□□□ -0.06
CLK3-218ENST00000566926 GDAQ9Y2T3 454 aa14.67□□□□□ -0.06
CLK3-218ENST00000566926 PRG3Q9Y2Y8 225 aaPredicted RBP14.67□□□□□ -0.06
CLK3-218ENST00000566926 IRAK3Q9Y616 596 aa14.67□□□□□ -0.06
CLK3-218ENST00000566926 MTCL1Q9Y4B5 1905 aaKnown RBP14.66□□□□□ -0.06
CLK3-218ENST00000566926 C2orf71A6NGG8 1288 aa14.66□□□□□ -0.06
CLK3-218ENST00000566926 MATR3P43243 847 aaKnown RBP eCLIP14.66□□□□□ -0.06
CLK3-218ENST00000566926 LIG4P49917 911 aa14.66□□□□□ -0.06
CLK3-218ENST00000566926 KCNQ1P51787 676 aa14.66□□□□□ -0.06
CLK3-218ENST00000566926 NOLC1Q14978 699 aaKnown RBP eCLIP14.66□□□□□ -0.06
CLK3-218ENST00000566926 DYMQ7RTS9 669 aa14.66□□□□□ -0.06
CLK3-218ENST00000566926 ZBTB33Q86T24 672 aa14.66□□□□□ -0.06
CLK3-218ENST00000566926 TMEM173Q86WV6 379 aaPredicted RBP14.66□□□□□ -0.06
CLK3-218ENST00000566926 ADAMTS19Q8TE59 1207 aa14.66□□□□□ -0.06
CLK3-218ENST00000566926 SMARCE1Q969G3 411 aa14.66□□□□□ -0.06
CLK3-218ENST00000566926 PAGE5Q96GU1 130 aa14.66□□□□□ -0.06
CLK3-218ENST00000566926 ACAP3Q96P50 834 aa14.66□□□□□ -0.06
CLK3-218ENST00000566926 FUCA2Q9BTY2 467 aa14.66□□□□□ -0.06
CLK3-218ENST00000566926 ZBP1Q9H171 429 aa14.66□□□□□ -0.06
CLK3-218ENST00000566926 ST6GALNAC4Q9H4F1 302 aa14.66□□□□□ -0.06
CLK3-218ENST00000566926 KBTBD4Q9NVX7 518 aa14.66□□□□□ -0.06
CLK3-218ENST00000566926 RMND1Q9NWS8 449 aa14.66□□□□□ -0.06
CLK3-218ENST00000566926 TBX20Q9UMR3 447 aa14.66□□□□□ -0.06
CLK3-218ENST00000566926 PCDHGC5Q9Y5F6 944 aa14.66□□□□□ -0.06
CLK3-218ENST00000566926 TTC28Q96AY4 2481 aa14.66□□□□□ -0.06
CLK3-218ENST00000566926 A0A087X0B3 334 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.65□□□□□ -0.06
CLK3-218ENST00000566926 MYMKA6NI61 221 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 HIDE1A8MVS5 230 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 H3BQ06 376 aaPredicted RBP14.65□□□□□ -0.06
CLK3-218ENST00000566926 HNRNPDLO14979 420 aaKnown RBP14.65□□□□□ -0.06
CLK3-218ENST00000566926 PER2O15055 1255 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 B4GALT3O60512 393 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 TADA2AO75478 443 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 PIGRP01833 764 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 SOD2P04179 222 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 GTF2F1P35269 517 aaKnown RBP eCLIP14.65□□□□□ -0.06
CLK3-218ENST00000566926 LTBRP36941 435 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 GTF2BQ00403 316 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 TYRO3Q06418 890 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 MCL1Q07820 350 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 PTCRAQ6ISU1 281 aaPredicted RBP14.65□□□□□ -0.06
CLK3-218ENST00000566926 PPFIBP1Q86W92 1011 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.65□□□□□ -0.06
CLK3-218ENST00000566926 SPATA20Q8TB22 786 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 CCDC47Q96A33 483 aaKnown RBP14.65□□□□□ -0.06
CLK3-218ENST00000566926 HVCN1Q96D96 273 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 UROC1Q96N76 676 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 GSDMAQ96QA5 445 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 UHRF1Q96T88 793 aaPredicted RBP14.65□□□□□ -0.06
CLK3-218ENST00000566926 EMILIN2Q9BXX0 1053 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 MRPL17Q9NRX2 175 aaKnown RBP14.65□□□□□ -0.06
CLK3-218ENST00000566926 SLC38A7Q9NVC3 462 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 ANKFY1Q9P2R3 1169 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 DACH1Q9UI36 760 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 CD207Q9UJ71 328 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 ADAM28Q9UKQ2 775 aa14.65□□□□□ -0.06
CLK3-218ENST00000566926 PTGESO14684 152 aa14.64□□□□□ -0.07
CLK3-218ENST00000566926 LINC01565O15544 149 aa14.64□□□□□ -0.07
CLK3-218ENST00000566926 URODP06132 367 aa14.64□□□□□ -0.07
CLK3-218ENST00000566926 HARSP12081 509 aaKnown RBP14.64□□□□□ -0.07
CLK3-218ENST00000566926 IDEP14735 1019 aa14.64□□□□□ -0.07
CLK3-218ENST00000566926 ALCAMQ13740 583 aa14.64□□□□□ -0.07
CLK3-218ENST00000566926 HSP90AA2PQ14568 343 aaPredicted RBP14.64□□□□□ -0.07
CLK3-218ENST00000566926 CT47A1Q5JQC4 288 aaPredicted RBP14.64□□□□□ -0.07
CLK3-218ENST00000566926 L1TD1Q5T7N2 865 aaKnown RBP14.64□□□□□ -0.07
CLK3-218ENST00000566926 KIAA1841Q6NSI8 718 aa14.64□□□□□ -0.07
CLK3-218ENST00000566926 CNNM4Q6P4Q7 775 aa14.64□□□□□ -0.07
CLK3-218ENST00000566926 TMEM184AQ6ZMB5 413 aa14.64□□□□□ -0.07
CLK3-218ENST00000566926 CCDC65Q8IXS2 484 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms