RNA–Protein interactions for RNA: ENST00000566119.5

EDC3-209, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-209ENST00000566119 MPZL3Q6UWV2 235 aa22.56■■□□□ 1.2
EDC3-209ENST00000566119 ALKAL1Q6UXT8 129 aa22.56■■□□□ 1.2
EDC3-209ENST00000566119 TMC5Q6UXY8 1006 aa22.56■■□□□ 1.2
EDC3-209ENST00000566119 FEZF2Q8TBJ5 459 aa22.56■■□□□ 1.2
EDC3-209ENST00000566119 CLIC6Q96NY7 704 aa22.56■■□□□ 1.2
EDC3-209ENST00000566119 NECTIN4Q96NY8 510 aa22.56■■□□□ 1.2
EDC3-209ENST00000566119 PPP1R10Q96QC0 940 aaKnown RBP22.56■■□□□ 1.2
EDC3-209ENST00000566119 ZSCAN16Q9H4T2 348 aaPredicted RBP22.56■■□□□ 1.2
EDC3-209ENST00000566119 POMKQ9H5K3 350 aa22.56■■□□□ 1.2
EDC3-209ENST00000566119 SMIM28A0A1B0GU29 152 aa22.55■■□□□ 1.2
EDC3-209ENST00000566119 TOM1L1O75674 476 aa22.55■■□□□ 1.2
EDC3-209ENST00000566119 MTHFRP42898 656 aa22.55■■□□□ 1.2
EDC3-209ENST00000566119 NCKAP1LP55160 1127 aa22.55■■□□□ 1.2
EDC3-209ENST00000566119 XKR4Q5GH76 650 aa22.55■■□□□ 1.2
EDC3-209ENST00000566119 ATAT1Q5SQI0 421 aa22.55■■□□□ 1.2
EDC3-209ENST00000566119 HAUS6Q7Z4H7 955 aa22.55■■□□□ 1.2
EDC3-209ENST00000566119 GPR65Q8IYL9 337 aa22.55■■□□□ 1.2
EDC3-209ENST00000566119 MYCT1Q8N699 235 aa22.55■■□□□ 1.2
EDC3-209ENST00000566119 RIN2Q8WYP3 895 aaPredicted RBP22.55■■□□□ 1.2
EDC3-209ENST00000566119 RIPOR3Q96MK2 946 aa22.55■■□□□ 1.2
EDC3-209ENST00000566119 ACAP3Q96P50 834 aa22.55■■□□□ 1.2
EDC3-209ENST00000566119 USP28Q96RU2 1077 aa22.55■■□□□ 1.2
EDC3-209ENST00000566119 TOPORSQ9NS56 1045 aaPredicted RBP22.55■■□□□ 1.2
EDC3-209ENST00000566119 SF3B1O75533 1304 aaKnown RBP eCLIP22.55■■□□□ 1.22e-11■■■■■ 62
EDC3-209ENST00000566119 KRT18P05783 430 aaKnown RBP22.54■■□□□ 1.2
EDC3-209ENST00000566119 HARSP12081 509 aaKnown RBP22.54■■□□□ 1.2
EDC3-209ENST00000566119 SP100P23497 879 aaPredicted RBP22.54■■□□□ 1.2
EDC3-209ENST00000566119 IGFBP6P24592 240 aaPredicted RBP22.54■■□□□ 1.2
EDC3-209ENST00000566119 ZNF131P52739 623 aa22.54■■□□□ 1.2
EDC3-209ENST00000566119 ZPBP2Q6X784 338 aa22.54■■□□□ 1.2
EDC3-209ENST00000566119 LARP4BQ92615 738 aaKnown RBP22.54■■□□□ 1.2
EDC3-209ENST00000566119 SFXN1Q9H9B4 322 aa22.54■■□□□ 1.2
EDC3-209ENST00000566119 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.54■■□□□ 1.2
EDC3-209ENST00000566119 RAPGEFL1Q9UHV5 662 aa22.54■■□□□ 1.2
EDC3-209ENST00000566119 SPDYE4A6NLX3 237 aa22.53■■□□□ 1.2
EDC3-209ENST00000566119 H0YCG3 227 aa22.53■■□□□ 1.2
EDC3-209ENST00000566119 FAM13AO94988 1023 aa22.53■■□□□ 1.2
EDC3-209ENST00000566119 MYBP10242 640 aa22.53■■□□□ 1.2
EDC3-209ENST00000566119 CLCNKBP51801 687 aa22.53■■□□□ 1.2
EDC3-209ENST00000566119 SLC39A14Q15043 492 aa22.53■■□□□ 1.2
EDC3-209ENST00000566119 RTP2Q5QGT7 225 aa22.53■■□□□ 1.2
EDC3-209ENST00000566119 FAM171A1Q5VUB5 890 aa22.53■■□□□ 1.2
EDC3-209ENST00000566119 DCLRE1AQ6PJP8 1040 aa22.53■■□□□ 1.2
EDC3-209ENST00000566119 PRSS55Q6UWB4 352 aaPredicted RBP22.53■■□□□ 1.2
EDC3-209ENST00000566119 CEP57Q86XR8 500 aa22.53■■□□□ 1.2
EDC3-209ENST00000566119 PALB2Q86YC2 1186 aa22.53■■□□□ 1.2
EDC3-209ENST00000566119 PARVGQ9HBI0 331 aa22.53■■□□□ 1.2
EDC3-209ENST00000566119 TSHZ2Q9NRE2 1034 aa22.53■■□□□ 1.2
EDC3-209ENST00000566119 FNIP2Q9P278 1114 aa22.53■■□□□ 1.2
EDC3-209ENST00000566119 ANKFY1Q9P2R3 1169 aa22.53■■□□□ 1.2
EDC3-209ENST00000566119 CCDC39Q9UFE4 941 aa22.53■■□□□ 1.2
EDC3-209ENST00000566119 CLDN3O15551 220 aa22.52■■□□□ 1.2
EDC3-209ENST00000566119 B3GAT3O94766 335 aa22.52■■□□□ 1.2
EDC3-209ENST00000566119 GLUD1P00367 558 aa22.52■■□□□ 1.2
EDC3-209ENST00000566119 SPATA31D3P0C874 917 aa22.52■■□□□ 1.2
EDC3-209ENST00000566119 RPL17P18621 184 aaKnown RBP22.52■■□□□ 1.2
EDC3-209ENST00000566119 SEZ6Q53EL9 994 aa22.52■■□□□ 1.2
EDC3-209ENST00000566119 SPATA31D4Q6ZUB0 917 aa22.52■■□□□ 1.2
EDC3-209ENST00000566119 GPR149Q86SP6 731 aa22.52■■□□□ 1.2
EDC3-209ENST00000566119 GLYCTKQ8IVS8 523 aa22.52■■□□□ 1.2
EDC3-209ENST00000566119 KCNN1Q92952 543 aa22.52■■□□□ 1.2
EDC3-209ENST00000566119 ZMAT2Q96NC0 199 aaKnown RBP22.52■■□□□ 1.2
EDC3-209ENST00000566119 TTPALQ9BTX7 342 aa22.52■■□□□ 1.2
EDC3-209ENST00000566119 ZHX3Q9H4I2 956 aa22.52■■□□□ 1.2
EDC3-209ENST00000566119 GOLGA2P5Q9HBQ8 144 aa22.52■■□□□ 1.2
EDC3-209ENST00000566119 MAN1C1Q9NR34 630 aa22.52■■□□□ 1.2
EDC3-209ENST00000566119 PRR33A8MZF0 331 aa22.51■■□□□ 1.19
EDC3-209ENST00000566119 MEFVO15553 781 aaPredicted RBP22.51■■□□□ 1.19
EDC3-209ENST00000566119 TRAK2O60296 914 aa22.51■■□□□ 1.19
EDC3-209ENST00000566119 KCNE1P15382 129 aa22.51■■□□□ 1.19
EDC3-209ENST00000566119 SOX4Q06945 474 aaPredicted RBP22.51■■□□□ 1.19
EDC3-209ENST00000566119 MCL1Q07820 350 aa22.51■■□□□ 1.19
EDC3-209ENST00000566119 ELAVL2Q12926 359 aaKnown RBP22.51■■□□□ 1.19
EDC3-209ENST00000566119 NOLC1Q14978 699 aaKnown RBP eCLIP22.51■■□□□ 1.19
EDC3-209ENST00000566119 UPP1Q16831 310 aa22.51■■□□□ 1.19
EDC3-209ENST00000566119 RRAGBQ5VZM2 374 aa22.51■■□□□ 1.19
EDC3-209ENST00000566119 CD300LGQ6UXG3 332 aa22.51■■□□□ 1.19
EDC3-209ENST00000566119 HSCBQ8IWL3 235 aa22.51■■□□□ 1.19
EDC3-209ENST00000566119 LNX1Q8TBB1 728 aaPredicted RBP22.51■■□□□ 1.19
EDC3-209ENST00000566119 EDAQ92838 391 aa22.51■■□□□ 1.19
EDC3-209ENST00000566119 BICD1Q96G01 975 aa22.51■■□□□ 1.19
EDC3-209ENST00000566119 SNX27Q96L92 541 aa22.51■■□□□ 1.19
EDC3-209ENST00000566119 UROC1Q96N76 676 aa22.51■■□□□ 1.19
EDC3-209ENST00000566119 HAPLN2Q9GZV7 340 aa22.51■■□□□ 1.19
EDC3-209ENST00000566119 DPP7Q9UHL4 492 aa22.51■■□□□ 1.19
EDC3-209ENST00000566119 TBX20Q9UMR3 447 aa22.51■■□□□ 1.19
EDC3-209ENST00000566119 NR2E1Q9Y466 385 aa22.51■■□□□ 1.19
EDC3-209ENST00000566119 MORC2Q9Y6X9 1032 aaPredicted RBP22.51■■□□□ 1.19
EDC3-209ENST00000566119 TMEM189-UBE2V1I3L0A0 370 aa22.5■■□□□ 1.19
EDC3-209ENST00000566119 TGM5O43548 720 aa22.5■■□□□ 1.19
EDC3-209ENST00000566119 C1RP00736 705 aa22.5■■□□□ 1.19
EDC3-209ENST00000566119 MATR3P43243 847 aaKnown RBP eCLIP22.5■■□□□ 1.19
EDC3-209ENST00000566119 CREMQ03060 361 aa22.5■■□□□ 1.19
EDC3-209ENST00000566119 SLC10A6Q3KNW5 377 aa22.5■■□□□ 1.19
EDC3-209ENST00000566119 LILRA6Q6PI73 481 aa22.5■■□□□ 1.19
EDC3-209ENST00000566119 KRI1Q8N9T8 703 aaKnown RBP22.5■■□□□ 1.19
EDC3-209ENST00000566119 PIK3R5Q8WYR1 880 aa22.5■■□□□ 1.19
EDC3-209ENST00000566119 PANK2Q9BZ23 570 aa22.5■■□□□ 1.19
EDC3-209ENST00000566119 SLC38A7Q9NVC3 462 aa22.5■■□□□ 1.19
EDC3-209ENST00000566119 CNTN3Q9P232 1028 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms