RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 TRIM65Q6PJ69 517 aa20.3■□□□□ 0.84
COMMD4-213ENST00000565834 SLC39A5Q6ZMH5 540 aa20.3■□□□□ 0.84
COMMD4-213ENST00000565834 LRRC8AQ8IWT6 810 aa20.3■□□□□ 0.84
COMMD4-213ENST00000565834 ACAP3Q96P50 834 aa20.3■□□□□ 0.84
COMMD4-213ENST00000565834 INTS2Q9H0H0 1204 aaKnown RBP20.3■□□□□ 0.84
COMMD4-213ENST00000565834 AGO3Q9H9G7 860 aaKnown RBP20.3■□□□□ 0.84
COMMD4-213ENST00000565834 PRDM10Q9NQV6 1147 aa20.3■□□□□ 0.84
COMMD4-213ENST00000565834 SQORQ9Y6N5 450 aa20.3■□□□□ 0.84
COMMD4-213ENST00000565834 TRIP11Q15643 1979 aa20.3■□□□□ 0.84
COMMD4-213ENST00000565834 COL6A1P12109 1028 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 LPIN1Q14693 890 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 EPC2Q52LR7 807 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 TWF2Q6IBS0 349 aaKnown RBP20.29■□□□□ 0.84
COMMD4-213ENST00000565834 SV2AQ7L0J3 742 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 WDR49Q8IV35 697 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 USP38Q8NB14 1042 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 DIS3LQ8TF46 1054 aaKnown RBP20.29■□□□□ 0.84
COMMD4-213ENST00000565834 ZNF830Q96NB3 372 aaPredicted RBP20.29■□□□□ 0.84
COMMD4-213ENST00000565834 TMEM106CQ9BVX2 250 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 ERVK-5Q9HDB9 667 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 CHST12Q9NRB3 414 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 PTPRJQ12913 1337 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 RNF225M0QZC1 329 aaPredicted RBP20.29■□□□□ 0.84
COMMD4-213ENST00000565834 NOL4O94818 638 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 ACTN1P12814 892 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 CD52P31358 61 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 KRT9P35527 623 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 AP3M2P53677 418 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 UBXN11Q5T124 520 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 EHBP1Q8NDI1 1231 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 ZNF397Q8NF99 534 aaPredicted RBP20.29■□□□□ 0.84
COMMD4-213ENST00000565834 ZNF516Q92618 1163 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 EDEM3Q9BZQ6 932 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 GANQ9H2C0 597 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 KCNF1Q9H3M0 494 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 CEP72Q9P209 647 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 PADI3Q9ULW8 664 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 COQ4Q9Y3A0 265 aa20.29■□□□□ 0.84
COMMD4-213ENST00000565834 ZBED6P86452 979 aa20.28■□□□□ 0.84
COMMD4-213ENST00000565834 APBA1Q02410 837 aa20.28■□□□□ 0.84
COMMD4-213ENST00000565834 LRMPQ12912 555 aa20.28■□□□□ 0.84
COMMD4-213ENST00000565834 BIRC3Q13489 604 aa20.28■□□□□ 0.84
COMMD4-213ENST00000565834 ZACNQ401N2 412 aa20.28■□□□□ 0.84
COMMD4-213ENST00000565834 KLHDC7AQ5VTJ3 777 aa20.28■□□□□ 0.84
COMMD4-213ENST00000565834 TRAF7Q6Q0C0 670 aa20.28■□□□□ 0.84
COMMD4-213ENST00000565834 C15orf39Q6ZRI6 1047 aa20.28■□□□□ 0.84
COMMD4-213ENST00000565834 ANKRD33Q7Z3H0 272 aa20.28■□□□□ 0.84
COMMD4-213ENST00000565834 CACNA2D4Q7Z3S7 1137 aa20.28■□□□□ 0.84
COMMD4-213ENST00000565834 FBXL13Q8NEE6 735 aa20.28■□□□□ 0.84
COMMD4-213ENST00000565834 FAM84AQ96KN4 292 aa20.28■□□□□ 0.84
COMMD4-213ENST00000565834 PANX2Q96RD6 677 aa20.28■□□□□ 0.84
COMMD4-213ENST00000565834 OSBPL7Q9BZF2 842 aa20.28■□□□□ 0.84
COMMD4-213ENST00000565834 SIX2Q9NPC8 291 aa20.28■□□□□ 0.84
COMMD4-213ENST00000565834 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.28■□□□□ 0.84
COMMD4-213ENST00000565834 LACTBL1A8MY62 500 aa20.27■□□□□ 0.84
COMMD4-213ENST00000565834 NRDCO43847 1150 aa20.27■□□□□ 0.84
COMMD4-213ENST00000565834 C4BPAP04003 597 aaKnown RBP20.27■□□□□ 0.84
COMMD4-213ENST00000565834 SELPP16109 830 aa20.27■□□□□ 0.84
COMMD4-213ENST00000565834 CAPN2P17655 700 aa20.27■□□□□ 0.84
COMMD4-213ENST00000565834 YARSP54577 528 aaKnown RBP20.27■□□□□ 0.84
COMMD4-213ENST00000565834 POLR2FP61218 127 aaKnown RBP20.27■□□□□ 0.84
COMMD4-213ENST00000565834 SLC10A6Q3KNW5 377 aa20.27■□□□□ 0.84
COMMD4-213ENST00000565834 C1orf53Q5VUE5 145 aa20.27■□□□□ 0.84
COMMD4-213ENST00000565834 DPY19L2P1Q6NXN4 242 aa20.27■□□□□ 0.84
COMMD4-213ENST00000565834 LRRC8DQ7L1W4 858 aa20.27■□□□□ 0.84
COMMD4-213ENST00000565834 OR5B17Q8NGF7 314 aa20.27■□□□□ 0.84
COMMD4-213ENST00000565834 LMO3Q8TAP4 145 aa20.27■□□□□ 0.84
COMMD4-213ENST00000565834 NXF3Q9H4D5 531 aaKnown RBP20.27■□□□□ 0.84
COMMD4-213ENST00000565834 ASB7Q9H672 318 aa20.27■□□□□ 0.84
COMMD4-213ENST00000565834 ABHD10Q9NUJ1 306 aa20.27■□□□□ 0.84
COMMD4-213ENST00000565834 SNTG2Q9NY99 539 aa20.27■□□□□ 0.84
COMMD4-213ENST00000565834 DCDC2CA8MYV0 355 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 UCHL3P15374 230 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 ZSCAN20P17040 1043 aaPredicted RBP20.26■□□□□ 0.83
COMMD4-213ENST00000565834 DUOXA2Q1HG44 320 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 TDRD10Q5VZ19 366 aaKnown RBP20.26■□□□□ 0.83
COMMD4-213ENST00000565834 CD302Q8IX05 232 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 EFCAB13Q8IY85 973 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 OR8K1Q8NGG5 319 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 TAS1R2Q8TE23 839 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 TOX2Q96NM4 488 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 MCOLN1Q9GZU1 580 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 C11orf49Q9H6J7 331 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 NLRC4Q9NPP4 1024 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 HES2Q9Y543 173 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 RBAK-RBAKDNI3L0D1 243 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 PITPNM1O00562 1244 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 MEFVO15553 781 aaPredicted RBP20.26■□□□□ 0.83
COMMD4-213ENST00000565834 TMEM191BP0C7N4 346 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 TFAMQ00059 246 aaKnown RBP20.26■□□□□ 0.83
COMMD4-213ENST00000565834 TRIM60Q495X7 471 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 CCDC112Q8NEF3 446 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 SEMA4DQ92854 862 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 ANKRD36BP1Q96IX9 119 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 DNAJC7Q99615 494 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 APOL6Q9BWW8 343 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 MTMR12Q9C0I1 747 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 PLEKHA5Q9HAU0 1116 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 RAB20Q9NX57 234 aa20.26■□□□□ 0.83
COMMD4-213ENST00000565834 APEX2Q9UBZ4 518 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms