RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 FAM173BQ6P4H8 233 aa16.17■□□□□ 0.18
USB1-210ENST00000565151 BMP8AQ7Z5Y6 402 aa16.17■□□□□ 0.18
USB1-210ENST00000565151 TMEM161BQ8NDZ6 487 aa16.17■□□□□ 0.18
USB1-210ENST00000565151 RIN2Q8WYP3 895 aaPredicted RBP16.17■□□□□ 0.18
USB1-210ENST00000565151 CLSTN3Q9BQT9 956 aa16.17■□□□□ 0.18
USB1-210ENST00000565151 KMT5AQ9NQR1 393 aa16.17■□□□□ 0.18
USB1-210ENST00000565151 STK39Q9UEW8 545 aa16.17■□□□□ 0.18
USB1-210ENST00000565151 ARIH1Q9Y4X5 557 aaPredicted RBP16.17■□□□□ 0.18
USB1-210ENST00000565151 USP34Q70CQ2 3546 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 MYO15AQ9UKN7 3530 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 SMIM28A0A1B0GU29 152 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 TADA2AO75478 443 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 BRD1O95696 1058 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 GRM5P41594 1212 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 CLCNKBP51801 687 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 OSTNP61366 133 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 PTPAQ15257 358 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 TMEM132AQ24JP5 1023 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 USP41Q3LFD5 358 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 DCAF4L1Q3SXM0 396 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 SEZ6Q53EL9 994 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 ATAT1Q5SQI0 421 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 RSPO2Q6UXX9 243 aaPredicted RBP16.16■□□□□ 0.18
USB1-210ENST00000565151 ZBTB33Q86T24 672 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 TMEM87AQ8NBN3 555 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 KREMEN2Q8NCW0 462 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 CMASQ8NFW8 434 aaPredicted RBP16.16■□□□□ 0.18
USB1-210ENST00000565151 LNX1Q8TBB1 728 aaPredicted RBP16.16■□□□□ 0.18
USB1-210ENST00000565151 RIPOR3Q96MK2 946 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 ADPGKQ9BRR6 497 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 FNIP2Q9P278 1114 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 LIMD1Q9UGP4 676 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 HCN4Q9Y3Q4 1203 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.16■□□□□ 0.18
USB1-210ENST00000565151 CLIC4Q9Y696 253 aa16.16■□□□□ 0.18
USB1-210ENST00000565151 CCDC195A0A1B0GUA6 201 aa16.15■□□□□ 0.18
USB1-210ENST00000565151 I3L4J1 428 aa16.15■□□□□ 0.18
USB1-210ENST00000565151 ADH1AP07327 375 aa16.15■□□□□ 0.18
USB1-210ENST00000565151 MAPTP10636 758 aaKnown RBP16.15■□□□□ 0.18
USB1-210ENST00000565151 SCN1AP35498 2009 aa16.15■□□□□ 0.18
USB1-210ENST00000565151 SIGLEC14Q08ET2 396 aa16.15■□□□□ 0.18
USB1-210ENST00000565151 RESTQ13127 1097 aa16.15■□□□□ 0.18
USB1-210ENST00000565151 DMP1Q13316 513 aaPredicted RBP16.15■□□□□ 0.18
USB1-210ENST00000565151 SF3A1Q15459 793 aaKnown RBP16.15■□□□□ 0.18
USB1-210ENST00000565151 UPP1Q16831 310 aa16.15■□□□□ 0.18
USB1-210ENST00000565151 FAM171A1Q5VUB5 890 aa16.15■□□□□ 0.18
USB1-210ENST00000565151 ZDHHC14Q8IZN3 488 aa16.15■□□□□ 0.18
USB1-210ENST00000565151 SPIRE2Q8WWL2 714 aa16.15■□□□□ 0.18
USB1-210ENST00000565151 DRC1Q96MC2 740 aa16.15■□□□□ 0.18
USB1-210ENST00000565151 VPS13AQ96RL7 3174 aa16.15■□□□□ 0.18
USB1-210ENST00000565151 NR1I2O75469 434 aa16.14■□□□□ 0.17
USB1-210ENST00000565151 GLUD1P00367 558 aa16.14■□□□□ 0.17
USB1-210ENST00000565151 PLS3P13797 630 aa16.14■□□□□ 0.17
USB1-210ENST00000565151 VCPP55072 806 aaKnown RBP16.14■□□□□ 0.17
USB1-210ENST00000565151 MCM6Q14566 821 aa16.14■□□□□ 0.17
USB1-210ENST00000565151 KARSQ15046 597 aaKnown RBP16.14■□□□□ 0.17
USB1-210ENST00000565151 ZNF568Q3ZCX4 644 aa16.14■□□□□ 0.17
USB1-210ENST00000565151 C15orf39Q6ZRI6 1047 aa16.14■□□□□ 0.17
USB1-210ENST00000565151 GPR65Q8IYL9 337 aa16.14■□□□□ 0.17
USB1-210ENST00000565151 PIK3R5Q8WYR1 880 aa16.14■□□□□ 0.17
USB1-210ENST00000565151 PBXIP1Q96AQ6 731 aa16.14■□□□□ 0.17
USB1-210ENST00000565151 C18orf25Q96B23 403 aaPredicted RBP16.14■□□□□ 0.17
USB1-210ENST00000565151 FAM122AQ96E09 287 aa16.14■□□□□ 0.17
USB1-210ENST00000565151 FIZ1Q96SL8 496 aa16.14■□□□□ 0.17
USB1-210ENST00000565151 MRPL4Q9BYD3 311 aaKnown RBP16.14■□□□□ 0.17
USB1-210ENST00000565151 C17orf75Q9HAS0 396 aa16.14■□□□□ 0.17
USB1-210ENST00000565151 USTQ9Y2C2 406 aa16.14■□□□□ 0.17
USB1-210ENST00000565151 SSX2IPQ9Y2D8 614 aa16.14■□□□□ 0.17
USB1-210ENST00000565151 NR2E1Q9Y466 385 aa16.14■□□□□ 0.17
USB1-210ENST00000565151 DMDP11532 3685 aa16.14■□□□□ 0.17
USB1-210ENST00000565151 SF3B1O75533 1304 aaKnown RBP eCLIP16.14■□□□□ 0.17
USB1-210ENST00000565151 VPS37CA5D8V6 355 aaPredicted RBP16.13■□□□□ 0.17
USB1-210ENST00000565151 TMEM189-UBE2V1I3L0A0 370 aa16.13■□□□□ 0.17
USB1-210ENST00000565151 PLCG1P19174 1290 aa16.13■□□□□ 0.17
USB1-210ENST00000565151 SYT1P21579 422 aa16.13■□□□□ 0.17
USB1-210ENST00000565151 FGFR3P22607 806 aa16.13■□□□□ 0.17
USB1-210ENST00000565151 BRCC3P46736 316 aa16.13■□□□□ 0.17
USB1-210ENST00000565151 SLC10A6Q3KNW5 377 aa16.13■□□□□ 0.17
USB1-210ENST00000565151 SPECC1Q5M775 1068 aa16.13■□□□□ 0.17
USB1-210ENST00000565151 ZBTB41Q5SVQ8 909 aa16.13■□□□□ 0.17
USB1-210ENST00000565151 MPZL3Q6UWV2 235 aa16.13■□□□□ 0.17
USB1-210ENST00000565151 BRAPQ7Z569 592 aa16.13■□□□□ 0.17
USB1-210ENST00000565151 TDRD5Q8NAT2 981 aaKnown RBP16.13■□□□□ 0.17
USB1-210ENST00000565151 EPSTI1Q96J88 318 aa16.13■□□□□ 0.17
USB1-210ENST00000565151 SNX27Q96L92 541 aa16.13■□□□□ 0.17
USB1-210ENST00000565151 AK8Q96MA6 479 aa16.13■□□□□ 0.17
USB1-210ENST00000565151 REEP2Q9BRK0 252 aa16.13■□□□□ 0.17
USB1-210ENST00000565151 TTPALQ9BTX7 342 aa16.13■□□□□ 0.17
USB1-210ENST00000565151 TIPINQ9BVW5 301 aa16.13■□□□□ 0.17
USB1-210ENST00000565151 NT5C3AQ9H0P0 336 aa16.13■□□□□ 0.17
USB1-210ENST00000565151 RBM19Q9Y4C8 960 aaKnown RBP16.13■□□□□ 0.17
USB1-210ENST00000565151 TSC2P49815 1807 aa16.12■□□□□ 0.17
USB1-210ENST00000565151 FAM189A1O60320 539 aa16.12■□□□□ 0.17
USB1-210ENST00000565151 MCF2P10911 925 aa16.12■□□□□ 0.17
USB1-210ENST00000565151 HARSP12081 509 aaKnown RBP16.12■□□□□ 0.17
USB1-210ENST00000565151 KCNE1P15382 129 aa16.12■□□□□ 0.17
USB1-210ENST00000565151 NCKAP1LP55160 1127 aa16.12■□□□□ 0.17
USB1-210ENST00000565151 DHX8Q14562 1220 aaKnown RBP16.12■□□□□ 0.17
USB1-210ENST00000565151 PSMD5Q16401 504 aa16.12■□□□□ 0.17
USB1-210ENST00000565151 CEP57Q86XR8 500 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms