RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 HNRNPCP07910 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
COMMD4-209ENST00000564068 CATSPER3Q86XQ3 398 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 FAM81BQ96LP2 452 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 PNMA5Q96PV4 448 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.37□□□□□ -0.27
COMMD4-209ENST00000564068 MTMR4Q9NYA4 1195 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 PCSK1NQ9UHG2 260 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 PALM3A6NDB9 673 aaPredicted RBP13.37□□□□□ -0.27
COMMD4-209ENST00000564068 WDR64B1ANS9 1081 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 DNAJC6O75061 913 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 CBX6O95503 412 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 EYA4O95677 639 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 BTNL9Q6UXG8 535 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 ZNF354CQ86Y25 554 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 MTBPQ96DY7 904 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 SENP1Q9P0U3 644 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 HEY2Q9UBP5 337 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 CCPG1Q9ULG6 757 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 APOBEC2Q9Y235 224 aaKnown RBP13.37□□□□□ -0.27
COMMD4-209ENST00000564068 ZNF711Q9Y462 761 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 RPS6KA4O75676 772 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 MED21Q13503 144 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 HIF1AQ16665 826 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 BZW1Q7L1Q6 419 aaKnown RBP13.37□□□□□ -0.27
COMMD4-209ENST00000564068 PCGF5Q86SE9 256 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 MTDHQ86UE4 582 aaKnown RBP13.37□□□□□ -0.27
COMMD4-209ENST00000564068 NUDCD3Q8IVD9 361 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 ARHGAP18Q8N392 663 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 ATP11CQ8NB49 1132 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 PGM2Q96G03 612 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 TRIM56Q9BRZ2 755 aaKnown RBP13.37□□□□□ -0.27
COMMD4-209ENST00000564068 SEPT10Q9P0V9 454 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 TRAF3IP3Q9Y228 551 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 KDM6AO15550 1401 aaPredicted RBP13.37□□□□□ -0.27
COMMD4-209ENST00000564068 EPHB2P29323 1055 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 MMEL1Q495T6 779 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.36□□□□□ -0.27
COMMD4-209ENST00000564068 DAGLBQ8NCG7 672 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 ATP8B4Q8TF62 1192 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 RBM41Q96IZ5 413 aaKnown RBP13.36□□□□□ -0.27
COMMD4-209ENST00000564068 HIC2Q96JB3 615 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 SCYL1Q96KG9 808 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 DCLRE1BQ9H816 532 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 CTNNAL1Q9UBT7 734 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 MYO3BQ8WXR4 1341 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 WTIPA6NIX2 430 aaPredicted RBP13.36□□□□□ -0.27
COMMD4-209ENST00000564068 NOP56O00567 594 aaKnown RBP13.36□□□□□ -0.27
COMMD4-209ENST00000564068 SLC16A3O15427 465 aaKnown RBP13.36□□□□□ -0.27
COMMD4-209ENST00000564068 DKC1O60832 514 aaKnown RBP eCLIP13.36□□□□□ -0.27
COMMD4-209ENST00000564068 MED24O75448 989 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 STK10O94804 968 aaKnown RBP13.36□□□□□ -0.27
COMMD4-209ENST00000564068 KRT4P19013 534 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 KRT39Q6A163 491 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 SCARA5Q6ZMJ2 495 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 HSPH1Q92598 858 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 CDKL2Q92772 493 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 FAF2Q96CS3 445 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 DNAI2Q9GZS0 605 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 CD209Q9NNX6 404 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 NAALADL1Q9UQQ1 740 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 TCP10L2B9ZVM9 353 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 RALAP11233 206 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 EVX2Q03828 476 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 KLHL38Q2WGJ6 581 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 TAF1BQ53T94 588 aaPredicted RBP13.36□□□□□ -0.27
COMMD4-209ENST00000564068 SLC20A1Q8WUM9 679 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 FAM213AQ9BRX8 229 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 OSBPL8Q9BZF1 889 aa13.36□□□□□ -0.27
COMMD4-209ENST00000564068 O00370 1275 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 CYTH3O43739 400 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 NT5C2P49902 561 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 ZNF543Q08ER8 600 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 MIGA2Q7L4E1 593 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 CYFIP1Q7L576 1253 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 FIS1Q9Y3D6 152 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 TMEM191BP0C7N4 346 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 HNRNPH3P31942 346 aaKnown RBP13.35□□□□□ -0.27
COMMD4-209ENST00000564068 ITPK1Q13572 414 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 LAMB3Q13751 1172 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 OLFML2BQ68BL8 750 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 ARHGEF1Q92888 912 aaKnown RBP13.35□□□□□ -0.27
COMMD4-209ENST00000564068 MAGEB18Q96M61 343 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 THEGQ9P2T0 379 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 SCINQ9Y6U3 715 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 TTC4O95801 387 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 KRT16P08779 473 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 PSMA2P25787 234 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 SERPINB3P29508 390 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 RFC5P40937 340 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 XRCC4Q13426 336 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 C3orf62Q6ZUJ4 267 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 PRPF31Q8WWY3 499 aaKnown RBP13.35□□□□□ -0.27
COMMD4-209ENST00000564068 ACAP3Q96P50 834 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 OLFM3Q96PB7 478 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 LXNQ9BS40 222 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 RANBP17Q9H2T7 1088 aaKnown RBP13.35□□□□□ -0.27
COMMD4-209ENST00000564068 JMJD4Q9H9V9 463 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 UVRAGQ9P2Y5 699 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 NARFQ9UHQ1 456 aa13.35□□□□□ -0.27
COMMD4-209ENST00000564068 CNGA1P29973 690 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms