RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 ZP2Q05996 745 aa33.65■■■□□ 2.98
CMTM4-204ENST00000563952 ADHFE1Q8IWW8 467 aa33.65■■■□□ 2.98
CMTM4-204ENST00000563952 RNF168Q8IYW5 571 aaPredicted RBP33.65■■■□□ 2.98
CMTM4-204ENST00000563952 B3GALT6Q96L58 329 aa33.65■■■□□ 2.98
CMTM4-204ENST00000563952 ACAP3Q96P50 834 aa33.65■■■□□ 2.98
CMTM4-204ENST00000563952 KLHL5Q96PQ7 755 aa33.65■■■□□ 2.98
CMTM4-204ENST00000563952 GPR62Q9BZJ7 368 aa33.65■■■□□ 2.98
CMTM4-204ENST00000563952 TBX20Q9UMR3 447 aa33.65■■■□□ 2.98
CMTM4-204ENST00000563952 NCOR1O75376 2440 aa33.65■■■□□ 2.98
CMTM4-204ENST00000563952 CNPP09543 421 aaKnown RBP33.64■■■□□ 2.98
CMTM4-204ENST00000563952 EPCAMP16422 314 aa33.64■■■□□ 2.98
CMTM4-204ENST00000563952 KLRC2P26717 231 aa33.64■■■□□ 2.98
CMTM4-204ENST00000563952 SEZ6Q53EL9 994 aa33.64■■■□□ 2.98
CMTM4-204ENST00000563952 SYCE2Q6PIF2 218 aa33.64■■■□□ 2.98
CMTM4-204ENST00000563952 DDX12PQ92771 950 aa33.64■■■□□ 2.98
CMTM4-204ENST00000563952 PPP1R10Q96QC0 940 aaKnown RBP33.64■■■□□ 2.98
CMTM4-204ENST00000563952 SSX2IPQ9Y2D8 614 aa33.64■■■□□ 2.98
CMTM4-204ENST00000563952 MYMKA6NI61 221 aa33.63■■■□□ 2.97
CMTM4-204ENST00000563952 CLDN3O15551 220 aa33.63■■■□□ 2.97
CMTM4-204ENST00000563952 LILRB3O75022 631 aa33.63■■■□□ 2.97
CMTM4-204ENST00000563952 KIF4AO95239 1232 aa33.63■■■□□ 2.97
CMTM4-204ENST00000563952 HOXB8P17481 243 aaPredicted RBP33.63■■■□□ 2.97
CMTM4-204ENST00000563952 NMT1P30419 496 aaKnown RBP33.63■■■□□ 2.97
CMTM4-204ENST00000563952 LIG4P49917 911 aa33.63■■■□□ 2.97
CMTM4-204ENST00000563952 SLC22A17Q8WUG5 538 aa33.63■■■□□ 2.97
CMTM4-204ENST00000563952 SF3B1O75533 1304 aaKnown RBP eCLIP33.62■■■□□ 2.97
CMTM4-204ENST00000563952 SMIM28A0A1B0GU29 152 aa33.62■■■□□ 2.97
CMTM4-204ENST00000563952 HNRNPDLO14979 420 aaKnown RBP33.62■■■□□ 2.97
CMTM4-204ENST00000563952 SCP2P22307 547 aa33.62■■■□□ 2.97
CMTM4-204ENST00000563952 DSG1Q02413 1049 aa33.62■■■□□ 2.97
CMTM4-204ENST00000563952 MCL1Q07820 350 aa33.62■■■□□ 2.97
CMTM4-204ENST00000563952 TPRNQ4KMQ1 711 aa33.62■■■□□ 2.97
CMTM4-204ENST00000563952 KIAA0319Q5VV43 1072 aa33.62■■■□□ 2.97
CMTM4-204ENST00000563952 PPFIBP1Q86W92 1011 aa33.62■■■□□ 2.97
CMTM4-204ENST00000563952 SFR1Q86XK3 245 aa33.62■■■□□ 2.97
CMTM4-204ENST00000563952 SNX27Q96L92 541 aa33.62■■■□□ 2.97
CMTM4-204ENST00000563952 S1PR5Q9H228 398 aa33.62■■■□□ 2.97
CMTM4-204ENST00000563952 CUTAO60888 179 aa33.61■■■□□ 2.97
CMTM4-204ENST00000563952 USP41Q3LFD5 358 aa33.61■■■□□ 2.97
CMTM4-204ENST00000563952 ALKAL1Q6UXT8 129 aa33.61■■■□□ 2.97
CMTM4-204ENST00000563952 KCNN1Q92952 543 aa33.61■■■□□ 2.97
CMTM4-204ENST00000563952 FIZ1Q96SL8 496 aa33.61■■■□□ 2.97
CMTM4-204ENST00000563952 POP1Q99575 1024 aaKnown RBP33.61■■■□□ 2.97
CMTM4-204ENST00000563952 HAPLN2Q9GZV7 340 aa33.61■■■□□ 2.97
CMTM4-204ENST00000563952 CITO14578 2027 aa33.61■■■□□ 2.97
CMTM4-204ENST00000563952 BDP1A6H8Y1 2624 aa33.6■■■□□ 2.97
CMTM4-204ENST00000563952 ZC2HC1CQ53FD0 456 aaPredicted RBP33.6■■■□□ 2.97
CMTM4-204ENST00000563952 XKR4Q5GH76 650 aa33.6■■■□□ 2.97
CMTM4-204ENST00000563952 GOLGA2P5Q9HBQ8 144 aa33.6■■■□□ 2.97
CMTM4-204ENST00000563952 CHST7Q9NS84 486 aa33.6■■■□□ 2.97
CMTM4-204ENST00000563952 DZANK1Q9NVP4 752 aa33.6■■■□□ 2.97
CMTM4-204ENST00000563952 DNM1Q05193 864 aaKnown RBP33.59■■■□□ 2.97
CMTM4-204ENST00000563952 C12orf76Q8N812 135 aaPredicted RBP33.59■■■□□ 2.97
CMTM4-204ENST00000563952 KCNG4Q8TDN1 519 aa33.59■■■□□ 2.97
CMTM4-204ENST00000563952 RIN2Q8WYP3 895 aaPredicted RBP33.59■■■□□ 2.97
CMTM4-204ENST00000563952 SUSD6Q92537 303 aa33.59■■■□□ 2.97
CMTM4-204ENST00000563952 DNAJC19Q96DA6 116 aa33.59■■■□□ 2.97
CMTM4-204ENST00000563952 SPDYE4A6NLX3 237 aa33.58■■■□□ 2.97
CMTM4-204ENST00000563952 TEX28O15482 410 aa33.58■■■□□ 2.97
CMTM4-204ENST00000563952 ADH1AP07327 375 aa33.58■■■□□ 2.97
CMTM4-204ENST00000563952 ABCD1P33897 745 aa33.58■■■□□ 2.97
CMTM4-204ENST00000563952 CLCN4P51793 760 aa33.58■■■□□ 2.97
CMTM4-204ENST00000563952 CLCNKBP51801 687 aa33.58■■■□□ 2.97
CMTM4-204ENST00000563952 GTF2BQ00403 316 aa33.58■■■□□ 2.97
CMTM4-204ENST00000563952 RARS2Q5T160 578 aaKnown RBP33.58■■■□□ 2.97
CMTM4-204ENST00000563952 ATL3Q6DD88 541 aa33.58■■■□□ 2.97
CMTM4-204ENST00000563952 SHC4Q6S5L8 630 aa33.58■■■□□ 2.97
CMTM4-204ENST00000563952 KHSRPQ92945 711 aaKnown RBP eCLIP33.58■■■□□ 2.97
CMTM4-204ENST00000563952 ZMAT2Q96NC0 199 aaKnown RBP33.58■■■□□ 2.97
CMTM4-204ENST00000563952 SLC38A7Q9NVC3 462 aa33.58■■■□□ 2.97
CMTM4-204ENST00000563952 CFAP45Q9UL16 551 aa33.58■■■□□ 2.97
CMTM4-204ENST00000563952 C19orf67A6NJJ6 358 aa33.57■■■□□ 2.96
CMTM4-204ENST00000563952 MEFVO15553 781 aaPredicted RBP33.57■■■□□ 2.96
CMTM4-204ENST00000563952 PIGRP01833 764 aa33.57■■■□□ 2.96
CMTM4-204ENST00000563952 IDEP14735 1019 aa33.57■■■□□ 2.96
CMTM4-204ENST00000563952 ME1P48163 572 aa33.57■■■□□ 2.96
CMTM4-204ENST00000563952 SOX4Q06945 474 aaPredicted RBP33.57■■■□□ 2.96
CMTM4-204ENST00000563952 FAM171A1Q5VUB5 890 aa33.57■■■□□ 2.96
CMTM4-204ENST00000563952 CEP57Q86XR8 500 aa33.57■■■□□ 2.96
CMTM4-204ENST00000563952 FBXL18Q96ME1 805 aa33.57■■■□□ 2.96
CMTM4-204ENST00000563952 UROC1Q96N76 676 aa33.57■■■□□ 2.96
CMTM4-204ENST00000563952 RXFP1Q9HBX9 757 aa33.57■■■□□ 2.96
CMTM4-204ENST00000563952 TBC1D7Q9P0N9 293 aa33.57■■■□□ 2.96
CMTM4-204ENST00000563952 CNTN3Q9P232 1028 aa33.57■■■□□ 2.96
CMTM4-204ENST00000563952 CDH22Q9UJ99 828 aa33.57■■■□□ 2.96
CMTM4-204ENST00000563952 MUC3AQ02505 3323 aa33.56■■■□□ 2.96
CMTM4-204ENST00000563952 B3GAT3O94766 335 aa33.56■■■□□ 2.96
CMTM4-204ENST00000563952 KCNE1P15382 129 aa33.56■■■□□ 2.96
CMTM4-204ENST00000563952 GAP43P17677 238 aa33.56■■■□□ 2.96
CMTM4-204ENST00000563952 CBX2Q14781 532 aaPredicted RBP33.56■■■□□ 2.96
CMTM4-204ENST00000563952 SLC10A6Q3KNW5 377 aa33.56■■■□□ 2.96
CMTM4-204ENST00000563952 AXDND1Q5T1B0 1012 aaPredicted RBP33.56■■■□□ 2.96
CMTM4-204ENST00000563952 CES5AQ6NT32 575 aa33.56■■■□□ 2.96
CMTM4-204ENST00000563952 KANK3Q6NY19 840 aa33.56■■■□□ 2.96
CMTM4-204ENST00000563952 DCLRE1AQ6PJP8 1040 aa33.56■■■□□ 2.96
CMTM4-204ENST00000563952 MAP4K3Q8IVH8 894 aa33.56■■■□□ 2.96
CMTM4-204ENST00000563952 STAMQ92783 540 aa33.56■■■□□ 2.96
CMTM4-204ENST00000563952 DHX58Q96C10 678 aa33.56■■■□□ 2.96
CMTM4-204ENST00000563952 MRPL44Q9H9J2 332 aaKnown RBP33.56■■■□□ 2.96
CMTM4-204ENST00000563952 CLTAP09496 248 aa33.55■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms