RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 ARIH1Q9Y4X5 557 aaPredicted RBP19.4■□□□□ 0.7
NME3-205ENST00000563854 DENND4AQ7Z401 1863 aa19.39■□□□□ 0.7
NME3-205ENST00000563854 TGM5O43548 720 aa19.39■□□□□ 0.69
NME3-205ENST00000563854 PLS3P13797 630 aa19.39■□□□□ 0.69
NME3-205ENST00000563854 UBA7P41226 1012 aa19.39■□□□□ 0.69
NME3-205ENST00000563854 GRM5P41594 1212 aa19.39■□□□□ 0.69
NME3-205ENST00000563854 CREMQ03060 361 aa19.39■□□□□ 0.69
NME3-205ENST00000563854 PSMD5Q16401 504 aa19.39■□□□□ 0.69
NME3-205ENST00000563854 TMEM119Q4V9L6 283 aa19.39■□□□□ 0.69
NME3-205ENST00000563854 C15orf39Q6ZRI6 1047 aa19.39■□□□□ 0.69
NME3-205ENST00000563854 BRAPQ7Z569 592 aa19.39■□□□□ 0.69
NME3-205ENST00000563854 SMG7Q92540 1137 aaKnown RBP19.39■□□□□ 0.69
NME3-205ENST00000563854 CALML4Q96GE6 196 aa19.39■□□□□ 0.69
NME3-205ENST00000563854 TTPALQ9BTX7 342 aa19.39■□□□□ 0.69
NME3-205ENST00000563854 SMOC2Q9H3U7 446 aa19.39■□□□□ 0.69
NME3-205ENST00000563854 C17orf75Q9HAS0 396 aa19.39■□□□□ 0.69
NME3-205ENST00000563854 PIDD1Q9HB75 910 aa19.39■□□□□ 0.69
NME3-205ENST00000563854 TOPORSQ9NS56 1045 aaPredicted RBP19.39■□□□□ 0.69
NME3-205ENST00000563854 FNIP2Q9P278 1114 aa19.39■□□□□ 0.69
NME3-205ENST00000563854 C2orf16Q68DN1 1984 aa19.39■□□□□ 0.69
NME3-205ENST00000563854 B3GAT3O94766 335 aa19.38■□□□□ 0.69
NME3-205ENST00000563854 MATR3P43243 847 aaKnown RBP eCLIP19.38■□□□□ 0.69
NME3-205ENST00000563854 CLCNKBP51801 687 aa19.38■□□□□ 0.69
NME3-205ENST00000563854 SMTNP53814 917 aa19.38■□□□□ 0.69
NME3-205ENST00000563854 SLC12A3P55017 1021 aa19.38■□□□□ 0.69
NME3-205ENST00000563854 SF3A1Q15459 793 aaKnown RBP19.38■□□□□ 0.69
NME3-205ENST00000563854 MPZL3Q6UWV2 235 aa19.38■□□□□ 0.69
NME3-205ENST00000563854 OTOP3Q7RTS5 596 aa19.38■□□□□ 0.69
NME3-205ENST00000563854 GPBP1Q86WP2 473 aa19.38■□□□□ 0.69
NME3-205ENST00000563854 ZDHHC14Q8IZN3 488 aa19.38■□□□□ 0.69
NME3-205ENST00000563854 PLCD3Q8N3E9 789 aa19.38■□□□□ 0.69
NME3-205ENST00000563854 AK8Q96MA6 479 aa19.38■□□□□ 0.69
NME3-205ENST00000563854 PPP1R10Q96QC0 940 aaKnown RBP19.38■□□□□ 0.69
NME3-205ENST00000563854 USTQ9Y2C2 406 aa19.38■□□□□ 0.69
NME3-205ENST00000563854 BRD1O95696 1058 aa19.37■□□□□ 0.69
NME3-205ENST00000563854 BMP15O95972 392 aa19.37■□□□□ 0.69
NME3-205ENST00000563854 MCF2P10911 925 aa19.37■□□□□ 0.69
NME3-205ENST00000563854 GBP2P32456 591 aaPredicted RBP19.37■□□□□ 0.69
NME3-205ENST00000563854 GRIN1Q05586 938 aa19.37■□□□□ 0.69
NME3-205ENST00000563854 ELAVL2Q12926 359 aaKnown RBP19.37■□□□□ 0.69
NME3-205ENST00000563854 CUL4AQ13619 759 aa19.37■□□□□ 0.69
NME3-205ENST00000563854 BMP8AQ7Z5Y6 402 aa19.37■□□□□ 0.69
NME3-205ENST00000563854 FBXL6Q8N531 539 aa19.37■□□□□ 0.69
NME3-205ENST00000563854 CMASQ8NFW8 434 aaPredicted RBP19.37■□□□□ 0.69
NME3-205ENST00000563854 PIK3R5Q8WYR1 880 aa19.37■□□□□ 0.69
NME3-205ENST00000563854 ASIC4Q96FT7 647 aa19.37■□□□□ 0.69
NME3-205ENST00000563854 BICD1Q96G01 975 aa19.37■□□□□ 0.69
NME3-205ENST00000563854 ZBTB45Q96K62 511 aaPredicted RBP19.37■□□□□ 0.69
NME3-205ENST00000563854 PLEKHA4Q9H4M7 779 aa19.37■□□□□ 0.69
NME3-205ENST00000563854 PTPRHQ9HD43 1115 aa19.37■□□□□ 0.69
NME3-205ENST00000563854 FOXD4L1Q9NU39 408 aa19.37■□□□□ 0.69
NME3-205ENST00000563854 CLUHO75153 1309 aa19.36■□□□□ 0.69
NME3-205ENST00000563854 SMIM28A0A1B0GU29 152 aa19.36■□□□□ 0.69
NME3-205ENST00000563854 I3L4J1 428 aa19.36■□□□□ 0.69
NME3-205ENST00000563854 KRT18P05783 430 aaKnown RBP19.36■□□□□ 0.69
NME3-205ENST00000563854 IGFBP6P24592 240 aaPredicted RBP19.36■□□□□ 0.69
NME3-205ENST00000563854 KARSQ15046 597 aaKnown RBP19.36■□□□□ 0.69
NME3-205ENST00000563854 SEZ6Q53EL9 994 aa19.36■□□□□ 0.69
NME3-205ENST00000563854 LIN9Q5TKA1 542 aa19.36■□□□□ 0.69
NME3-205ENST00000563854 GPR65Q8IYL9 337 aa19.36■□□□□ 0.69
NME3-205ENST00000563854 KCTD17Q8N5Z5 321 aa19.36■□□□□ 0.69
NME3-205ENST00000563854 TMEM161BQ8NDZ6 487 aa19.36■□□□□ 0.69
NME3-205ENST00000563854 SPIRE2Q8WWL2 714 aa19.36■□□□□ 0.69
NME3-205ENST00000563854 SNX27Q96L92 541 aa19.36■□□□□ 0.69
NME3-205ENST00000563854 UROC1Q96N76 676 aa19.36■□□□□ 0.69
NME3-205ENST00000563854 ACAP3Q96P50 834 aa19.36■□□□□ 0.69
NME3-205ENST00000563854 ZHX3Q9H4I2 956 aa19.36■□□□□ 0.69
NME3-205ENST00000563854 KCND2Q9NZV8 630 aa19.36■□□□□ 0.69
NME3-205ENST00000563854 MYH11P35749 1972 aa19.35■□□□□ 0.69
NME3-205ENST00000563854 FAM13AO94988 1023 aa19.35■□□□□ 0.69
NME3-205ENST00000563854 PDGFBP01127 241 aaPredicted RBP19.35■□□□□ 0.69
NME3-205ENST00000563854 MAPTP10636 758 aaKnown RBP19.35■□□□□ 0.69
NME3-205ENST00000563854 PLCG1P19174 1290 aa19.35■□□□□ 0.69
NME3-205ENST00000563854 PDCP20941 246 aa19.35■□□□□ 0.69
NME3-205ENST00000563854 BRCC3P46736 316 aa19.35■□□□□ 0.69
NME3-205ENST00000563854 SOX4Q06945 474 aaPredicted RBP19.35■□□□□ 0.69
NME3-205ENST00000563854 NOLC1Q14978 699 aaKnown RBP eCLIP19.35■□□□□ 0.69
NME3-205ENST00000563854 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.35■□□□□ 0.69
NME3-205ENST00000563854 UBALD2Q8IYN6 164 aa19.35■□□□□ 0.69
NME3-205ENST00000563854 LNX1Q8TBB1 728 aaPredicted RBP19.35■□□□□ 0.69
NME3-205ENST00000563854 HDAC7Q8WUI4 952 aa19.35■□□□□ 0.69
NME3-205ENST00000563854 STAMQ92783 540 aa19.35■□□□□ 0.69
NME3-205ENST00000563854 ZNF707Q96C28 371 aaPredicted RBP19.35■□□□□ 0.69
NME3-205ENST00000563854 CLSTN3Q9BQT9 956 aa19.35■□□□□ 0.69
NME3-205ENST00000563854 REEP2Q9BRK0 252 aa19.35■□□□□ 0.69
NME3-205ENST00000563854 LARSQ9P2J5 1176 aaKnown RBP19.35■□□□□ 0.69
NME3-205ENST00000563854 K7ENM7 598 aa19.34■□□□□ 0.69
NME3-205ENST00000563854 ABLIM1O14639 778 aa19.34■□□□□ 0.69
NME3-205ENST00000563854 ADAM12O43184 909 aa19.34■□□□□ 0.69
NME3-205ENST00000563854 TOM1L1O75674 476 aa19.34■□□□□ 0.69
NME3-205ENST00000563854 PROZP22891 400 aa19.34■□□□□ 0.69
NME3-205ENST00000563854 TKTP29401 623 aaKnown RBP19.34■□□□□ 0.69
NME3-205ENST00000563854 LONP1P36776 959 aaKnown RBP19.34■□□□□ 0.69
NME3-205ENST00000563854 VCPP55072 806 aaKnown RBP19.34■□□□□ 0.69
NME3-205ENST00000563854 MCM6Q14566 821 aa19.34■□□□□ 0.69
NME3-205ENST00000563854 UPP1Q16831 310 aa19.34■□□□□ 0.69
NME3-205ENST00000563854 ARSHQ5FYA8 562 aa19.34■□□□□ 0.69
NME3-205ENST00000563854 SPECC1Q5M775 1068 aa19.34■□□□□ 0.69
NME3-205ENST00000563854 PDXDC1Q6P996 788 aa19.34■□□□□ 0.69
NME3-205ENST00000563854 LILRA6Q6PI73 481 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms