RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 ZBED3Q96IU2 234 aaPredicted RBP5.36□□□□□ -1.55
CDR2-203ENST00000563573 MRGPRX3Q96LB0 322 aa5.36□□□□□ -1.55
CDR2-203ENST00000563573 CCDC17Q96LX7 622 aa5.36□□□□□ -1.55
CDR2-203ENST00000563573 TTC14Q96N46 770 aa5.36□□□□□ -1.55
CDR2-203ENST00000563573 NOX5Q96PH1 765 aa5.36□□□□□ -1.55
CDR2-203ENST00000563573 C11orf84Q9BUA3 381 aaPredicted RBP5.36□□□□□ -1.55
CDR2-203ENST00000563573 BCAS3Q9H6U6 928 aa5.36□□□□□ -1.55
CDR2-203ENST00000563573 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.36□□□□□ -1.553e-7■■■■■ 27.1
CDR2-203ENST00000563573 CAPN10Q9HC96 672 aa5.36□□□□□ -1.55
CDR2-203ENST00000563573 CABP5Q9NP86 173 aa5.36□□□□□ -1.55
CDR2-203ENST00000563573 DDX4Q9NQI0 724 aaKnown RBP5.36□□□□□ -1.55
CDR2-203ENST00000563573 INCENPQ9NQS7 918 aa5.36□□□□□ -1.55
CDR2-203ENST00000563573 SPATA6Q9NWH7 488 aaPredicted RBP5.36□□□□□ -1.55
CDR2-203ENST00000563573 HERC5Q9UII4 1024 aaKnown RBP5.36□□□□□ -1.55
CDR2-203ENST00000563573 HACL1Q9UJ83 578 aa5.36□□□□□ -1.55
CDR2-203ENST00000563573 NAP1L2Q9ULW6 460 aaPredicted RBP5.36□□□□□ -1.55
CDR2-203ENST00000563573 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.36□□□□□ -1.55
CDR2-203ENST00000563573 PCDHAC2Q9Y5I4 1007 aa5.36□□□□□ -1.55
CDR2-203ENST00000563573 ROBO3Q96MS0 1386 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 DDTLA6NHG4 134 aaPredicted RBP5.35□□□□□ -1.55
CDR2-203ENST00000563573 MPHOSPH10O00566 681 aaKnown RBP5.35□□□□□ -1.55
CDR2-203ENST00000563573 PRDM1O75626 825 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 CALM1P0DP23 149 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 CALM2P0DP24 149 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 CALM3P0DP25 149 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 ATF4P18848 351 aaPredicted RBP5.35□□□□□ -1.55
CDR2-203ENST00000563573 RPL13P26373 211 aaKnown RBP5.35□□□□□ -1.55
CDR2-203ENST00000563573 EPS15P42566 896 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 RASA3Q14644 834 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 PPP2R5BQ15173 497 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 ZXDCQ2QGD7 858 aaPredicted RBP5.35□□□□□ -1.55
CDR2-203ENST00000563573 SUPT20HL1Q3ZLR7 823 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 CERKLQ49MI3 558 aaPredicted RBP5.35□□□□□ -1.55
CDR2-203ENST00000563573 FAM26FQ5R3K3 315 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 IFIT1BQ5T764 474 aaKnown RBP5.35□□□□□ -1.55
CDR2-203ENST00000563573 BORAQ6PGQ7 559 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 CPLX2Q6PUV4 134 aaKnown RBP5.35□□□□□ -1.55
CDR2-203ENST00000563573 CYB5R4Q7L1T6 521 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 FERMT3Q86UX7 667 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 PNMA8AQ86V59 439 aaPredicted RBP5.35□□□□□ -1.55
CDR2-203ENST00000563573 ZNF761Q86XN6 746 aaPredicted RBP5.35□□□□□ -1.55
CDR2-203ENST00000563573 DGKHQ86XP1 1220 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 ZFPM1Q8IX07 1006 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 IGDCC4Q8TDY8 1250 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 DPF3Q92784 378 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 TMX3Q96JJ7 454 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 TCEANC2Q96MN5 208 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 GPR20Q99678 358 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 LRRC2Q9BYS8 371 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 DEFB129Q9H1M3 183 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 SLKQ9H2G2 1235 aaPredicted RBP5.35□□□□□ -1.55
CDR2-203ENST00000563573 KAT14Q9H8E8 782 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 TCP11L1Q9NUJ3 509 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.35□□□□□ -1.55
CDR2-203ENST00000563573 PPP2R3BQ9Y5P8 575 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 MYH4Q9Y623 1939 aa5.35□□□□□ -1.55
CDR2-203ENST00000563573 COL2A1P02458 1487 aaPredicted RBP5.34□□□□□ -1.55
CDR2-203ENST00000563573 ATRNL1Q5VV63 1379 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 TNKSO95271 1327 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 NEDD4P46934 1319 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 KLF18A0A0U1RQI7 1052 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 CCDC196A0A1B0GTZ2 297 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 SHTN1A0MZ66 631 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 CPLX1O14810 134 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 ZBTB43O43298 467 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 SCG5P05408 212 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 C8BP07358 591 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 VEGFAP15692 232 aaPredicted RBP5.34□□□□□ -1.55
CDR2-203ENST00000563573 EPHX2P34913 555 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 CNR2P34972 360 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 NF2P35240 595 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 THBS2P35442 1172 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 GABPAQ06546 454 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 STK3Q13188 491 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 CUL4AQ13619 759 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 GNL2Q13823 731 aaKnown RBP5.34□□□□□ -1.55
CDR2-203ENST00000563573 TOB2Q14106 344 aaPredicted RBP5.34□□□□□ -1.55
CDR2-203ENST00000563573 FAM47AQ5JRC9 791 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 TATDN1Q6P1N9 297 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 CD300LDQ6UXZ3 194 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 CATIPQ7Z7H3 387 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 SGMS1Q86VZ5 419 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 TEX2Q8IWB9 1127 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 LGI4Q8N135 537 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 NPLOC4Q8TAT6 608 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 ADAMTS17Q8TE56 1095 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 FRS2Q8WU20 508 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 DDX1Q92499 740 aaKnown RBP5.34□□□□□ -1.55
CDR2-203ENST00000563573 DIO2Q92813 273 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 TRMT2BQ96GJ1 504 aaKnown RBP5.34□□□□□ -1.55
CDR2-203ENST00000563573 GORASP1Q9BQQ3 440 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 AGXT2Q9BYV1 514 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 ACTR10Q9NZ32 417 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 TPCN1Q9ULQ1 816 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 STX8Q9UNK0 236 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 SMC3Q9UQE7 1217 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 MYRFQ9Y2G1 1151 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 COA3Q9Y2R0 106 aaPredicted RBP5.34□□□□□ -1.55
CDR2-203ENST00000563573 SIT1Q9Y3P8 196 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 KIF3AQ9Y496 699 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms