RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 ZHX3Q9H4I2 956 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 PANK4Q9NVE7 773 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 MIOSQ9NXC5 875 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 LMCD1Q9NZU5 365 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 KANSL3Q9P2N6 904 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 STYXL1Q9Y6J8 313 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 MYO9BQ13459 2157 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 COL6A3P12111 3177 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 EYSQ5T1H1 3165 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 NLRC5Q86WI3 1866 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 PVALEFA0A1B0GWK0 134 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 KLRC4O43908 158 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 FAM189A1O60320 539 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 B4GALT3O60512 393 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 MYL1P05976 194 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 MCF2P10911 925 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 IDEP14735 1019 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 LAG3P18627 525 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 AKAP5P24588 427 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 CASP1P29466 404 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 CTNNB1P35222 781 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 MLH1P40692 756 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 GRM5P41594 1212 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 CASP5P51878 434 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 MCL1Q07820 350 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 DSC1Q08554 894 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 COASYQ13057 564 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 SNW1Q13573 536 aaKnown RBP6.78□□□□□ -1.32
CNOT1-204ENST00000563130 CUL4BQ13620 913 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 CAMK1Q14012 370 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 XKR4Q5GH76 650 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 BRICD5Q6PL45 260 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 MPZL3Q6UWV2 235 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 CLEC17AQ6ZS10 378 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 UNC13DQ70J99 1090 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 ZNF280BQ86YH2 543 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 CCDC65Q8IXS2 484 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 HACE1Q8IYU2 909 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 FMR1NBQ8N0W7 255 aaPredicted RBP6.78□□□□□ -1.32
CNOT1-204ENST00000563130 CEP120Q8N960 986 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 GDPD5Q8WTR4 605 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 THAP11Q96EK4 314 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 ZBTB45Q96K62 511 aaPredicted RBP6.78□□□□□ -1.32
CNOT1-204ENST00000563130 IPO9Q96P70 1041 aaKnown RBP6.78□□□□□ -1.32
CNOT1-204ENST00000563130 C11orf84Q9BUA3 381 aaPredicted RBP6.78□□□□□ -1.32
CNOT1-204ENST00000563130 FAM117AQ9C073 453 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 NRDE2Q9H7Z3 1164 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 MRPL44Q9H9J2 332 aaKnown RBP6.78□□□□□ -1.32
CNOT1-204ENST00000563130 SNTG2Q9NY99 539 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 PLAGL2Q9UPG8 496 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 MTCH2Q9Y6C9 303 aa6.78□□□□□ -1.32
CNOT1-204ENST00000563130 TRANK1O15050 2925 aa6.77□□□□□ -1.32
CNOT1-204ENST00000563130 PTGESO14684 152 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 HNRNPDLO14979 420 aaKnown RBP6.77□□□□□ -1.33
CNOT1-204ENST00000563130 MEFVO15553 781 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-204ENST00000563130 RECQL4O94761 1208 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 DDHD2O94830 711 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 ZNF202O95125 648 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 ITGB1P05556 798 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 FOSL2P15408 326 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 NDUFV2P19404 249 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 AFMP43652 599 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 ASIC1P78348 528 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 PLCB3Q01970 1234 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 KCNA1Q09470 495 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 GPM6BQ13491 265 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 ALCAMQ13740 583 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 NAB2Q15742 525 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 CSPP1Q1MSJ5 1256 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 ZNF568Q3ZCX4 644 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 KCNT2Q6UVM3 1135 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 ALKAL1Q6UXT8 129 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 KRBA2Q6ZNG9 492 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 EPM2AIP1Q7L775 607 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-204ENST00000563130 APBB1IPQ7Z5R6 666 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-204ENST00000563130 GRAMD1CQ8IYS0 662 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 CEP57L1Q8IYX8 460 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 SLC39A11Q8N1S5 342 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 KLHL23Q8NBE8 558 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 COLGALT1Q8NBJ5 622 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 SPPL3Q8TCT6 385 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 HLA-CQ95604 372 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 GAS2L1Q99501 681 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-204ENST00000563130 CXCL16Q9H2A7 254 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 BLZF1Q9H2G9 400 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 AAASQ9NRG9 546 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 INPP5FQ9Y2H2 1132 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 KIAA1671Q9BY89 1806 aa6.77□□□□□ -1.33
CNOT1-204ENST00000563130 COL4A4P53420 1690 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-204ENST00000563130 A0A0B4J269 797 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 CARNS1A5YM72 827 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 SPTLC1O15269 473 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 GRM6O15303 877 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 CLDN3O15551 220 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 POMCP01189 267 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 GALTP07902 379 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 MYBP10242 640 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 HOXD13P35453 343 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 SCNN1GP51170 649 aa6.76□□□□□ -1.33
CNOT1-204ENST00000563130 BCAR1P56945 870 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms