RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 TNFSF9P41273 254 aa13.89□□□□□ -0.19
CHRNA3-208ENST00000561128 NASPP49321 788 aaPredicted RBP13.89□□□□□ -0.19
CHRNA3-208ENST00000561128 XKR4Q5GH76 650 aa13.89□□□□□ -0.19
CHRNA3-208ENST00000561128 ALKAL1Q6UXT8 129 aa13.89□□□□□ -0.19
CHRNA3-208ENST00000561128 SPATA31D4Q6ZUB0 917 aa13.89□□□□□ -0.19
CHRNA3-208ENST00000561128 LARP4BQ92615 738 aaKnown RBP13.89□□□□□ -0.19
CHRNA3-208ENST00000561128 CALML4Q96GE6 196 aa13.89□□□□□ -0.19
CHRNA3-208ENST00000561128 RPGRIP1Q96KN7 1286 aa13.89□□□□□ -0.19
CHRNA3-208ENST00000561128 LRFN3Q9BTN0 628 aa13.89□□□□□ -0.19
CHRNA3-208ENST00000561128 TIPINQ9BVW5 301 aa13.89□□□□□ -0.19
CHRNA3-208ENST00000561128 PHF7Q9BWX1 381 aaPredicted RBP13.89□□□□□ -0.19
CHRNA3-208ENST00000561128 SMOC2Q9H3U7 446 aa13.89□□□□□ -0.19
CHRNA3-208ENST00000561128 TFIP11Q9UBB9 837 aaKnown RBP13.89□□□□□ -0.19
CHRNA3-208ENST00000561128 SMIM28A0A1B0GU29 152 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 K7ENM7 598 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 THP07101 528 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 MCF2P10911 925 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 BRCC3P46736 316 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 CLCNKBP51801 687 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 SPAG1Q07617 926 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 SLC39A14Q15043 492 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 ZC2HC1CQ53FD0 456 aaPredicted RBP13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 RSPO2Q6UXX9 243 aaPredicted RBP13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 TMC5Q6UXY8 1006 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 DYMQ7RTS9 669 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 HAUS6Q7Z4H7 955 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 SFR1Q86XK3 245 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 LINC00301Q8NCQ3 95 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 RIN2Q8WYP3 895 aaPredicted RBP13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 FBXL18Q96ME1 805 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 COLEC11Q9BWP8 271 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 ADAM7Q9H2U9 754 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 C17orf75Q9HAS0 396 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 RXFP1Q9HBX9 757 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 MAN1C1Q9NR34 630 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 MRPL17Q9NRX2 175 aaKnown RBP13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 TUBGCP4Q9UGJ1 667 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 ODF2LQ9ULJ1 636 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 FAM50BQ9Y247 325 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 CITO14578 2027 aa13.88□□□□□ -0.19
CHRNA3-208ENST00000561128 ANK1P16157 1881 aa13.87□□□□□ -0.19
CHRNA3-208ENST00000561128 C2CD4DB7Z1M9 353 aa13.87□□□□□ -0.19
CHRNA3-208ENST00000561128 ANKRD63C9JTQ0 380 aa13.87□□□□□ -0.19
CHRNA3-208ENST00000561128 SLC26A4O43511 780 aa13.87□□□□□ -0.19
CHRNA3-208ENST00000561128 RFPL2O75678 378 aa13.87□□□□□ -0.19
CHRNA3-208ENST00000561128 FAM13AO94988 1023 aa13.87□□□□□ -0.19
CHRNA3-208ENST00000561128 CXCL8P10145 99 aa13.87□□□□□ -0.19
CHRNA3-208ENST00000561128 KLRC2P26717 231 aa13.87□□□□□ -0.19
CHRNA3-208ENST00000561128 GUCY2FP51841 1108 aa13.87□□□□□ -0.19
CHRNA3-208ENST00000561128 MCL1Q07820 350 aa13.87□□□□□ -0.19
CHRNA3-208ENST00000561128 NOLC1Q14978 699 aaKnown RBP eCLIP13.87□□□□□ -0.19
CHRNA3-208ENST00000561128 SLC10A6Q3KNW5 377 aa13.87□□□□□ -0.19
CHRNA3-208ENST00000561128 HSCBQ8IWL3 235 aa13.87□□□□□ -0.19
CHRNA3-208ENST00000561128 RASSF8Q8NHQ8 419 aa13.87□□□□□ -0.19
CHRNA3-208ENST00000561128 DNAJC19Q96DA6 116 aa13.87□□□□□ -0.19
CHRNA3-208ENST00000561128 PANK2Q9BZ23 570 aa13.87□□□□□ -0.19
CHRNA3-208ENST00000561128 ZHX3Q9H4I2 956 aa13.87□□□□□ -0.19
CHRNA3-208ENST00000561128 KCND2Q9NZV8 630 aa13.87□□□□□ -0.19
CHRNA3-208ENST00000561128 CNTN3Q9P232 1028 aa13.87□□□□□ -0.19
CHRNA3-208ENST00000561128 RBM19Q9Y4C8 960 aaKnown RBP13.87□□□□□ -0.19
CHRNA3-208ENST00000561128 TSC2P49815 1807 aa13.87□□□□□ -0.19
CHRNA3-208ENST00000561128 SF3B1O75533 1304 aaKnown RBP eCLIP13.87□□□□□ -0.19
CHRNA3-208ENST00000561128 FSD2A1L4K1 749 aa13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 DCXO43602 365 aa13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 TOM1L1O75674 476 aa13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 HOXB8P17481 243 aaPredicted RBP13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 COL9A1P20849 921 aa13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 TKTP29401 623 aaKnown RBP13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 CASP5P51878 434 aa13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 KCNA1Q09470 495 aa13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 UPP1Q16831 310 aa13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 FAM171A1Q5VUB5 890 aa13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 KIAA1841Q6NSI8 718 aa13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 PALB2Q86YC2 1186 aa13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 KCTD17Q8N5Z5 321 aa13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 MYCT1Q8N699 235 aa13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 GLIS3Q8NEA6 775 aa13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 LNX1Q8TBB1 728 aaPredicted RBP13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 STAMQ92783 540 aa13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 KCNN1Q92952 543 aa13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 CLSTN3Q9BQT9 956 aa13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 CCDC94Q9BW85 323 aaPredicted RBP13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 EMILIN2Q9BXX0 1053 aa13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 PARVGQ9HBI0 331 aa13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 DZANK1Q9NVP4 752 aa13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 TBX20Q9UMR3 447 aa13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 MORC2Q9Y6X9 1032 aaPredicted RBP13.86□□□□□ -0.19
CHRNA3-208ENST00000561128 CARNS1A5YM72 827 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 PPEF2O14830 753 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 TGM5O43548 720 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 N4BP1O75113 896 aaKnown RBP13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 TADA2AO75478 443 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 PPP1R37O75864 691 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 F13A1P00488 732 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 PIGRP01833 764 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 SRGAP2BP0DMP2 458 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 ZSCAN22P10073 491 aaPredicted RBP13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 KCNE1P15382 129 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 WNT7BP56706 349 aa13.85□□□□□ -0.19
CHRNA3-208ENST00000561128 STRN3Q13033 797 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms