RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 SYNPOQ8N3V7 929 aa10.67□□□□□ -0.7
HERC1-210ENST00000560897 CCDC82Q8N4S0 544 aa10.67□□□□□ -0.7
HERC1-210ENST00000560897 PIK3R5Q8WYR1 880 aa10.67□□□□□ -0.7
HERC1-210ENST00000560897 ZC3H10Q96K80 434 aaKnown RBP10.67□□□□□ -0.7
HERC1-210ENST00000560897 CLSTN3Q9BQT9 956 aa10.67□□□□□ -0.7
HERC1-210ENST00000560897 AVENQ9NQS1 362 aaPredicted RBP10.67□□□□□ -0.7
HERC1-210ENST00000560897 IPPQ9Y573 584 aa10.67□□□□□ -0.7
HERC1-210ENST00000560897 AKAP13Q12802 2813 aa10.67□□□□□ -0.7
HERC1-210ENST00000560897 LNP1A1A4G5 178 aa10.66□□□□□ -0.7
HERC1-210ENST00000560897 CHMP2AO43633 222 aa10.66□□□□□ -0.7
HERC1-210ENST00000560897 ZNF862O60290 1169 aa10.66□□□□□ -0.7
HERC1-210ENST00000560897 CALM1P0DP23 149 aa10.66□□□□□ -0.7
HERC1-210ENST00000560897 CALM2P0DP24 149 aa10.66□□□□□ -0.7
HERC1-210ENST00000560897 CALM3P0DP25 149 aa10.66□□□□□ -0.7
HERC1-210ENST00000560897 FCARP24071 287 aa10.66□□□□□ -0.7
HERC1-210ENST00000560897 SFNP31947 248 aa10.66□□□□□ -0.7
HERC1-210ENST00000560897 JAK3P52333 1124 aa10.66□□□□□ -0.7
HERC1-210ENST00000560897 ELAVL2Q12926 359 aaKnown RBP10.66□□□□□ -0.7
HERC1-210ENST00000560897 GRIK3Q13003 919 aa10.66□□□□□ -0.7
HERC1-210ENST00000560897 HSP90AA2PQ14568 343 aaPredicted RBP10.66□□□□□ -0.7
HERC1-210ENST00000560897 KARSQ15046 597 aaKnown RBP10.66□□□□□ -0.7
HERC1-210ENST00000560897 PLK5Q496M5 336 aa10.66□□□□□ -0.7
HERC1-210ENST00000560897 VITQ6UXI7 678 aa10.66□□□□□ -0.7
HERC1-210ENST00000560897 PDZD4Q76G19 769 aaPredicted RBP10.66□□□□□ -0.7
HERC1-210ENST00000560897 SRGAP1Q7Z6B7 1085 aa10.66□□□□□ -0.7
HERC1-210ENST00000560897 KSR1Q8IVT5 923 aa10.66□□□□□ -0.7
HERC1-210ENST00000560897 LNX1Q8TBB1 728 aaPredicted RBP10.66□□□□□ -0.7
HERC1-210ENST00000560897 HASPINQ8TF76 798 aa10.66□□□□□ -0.7
HERC1-210ENST00000560897 SMARCD2Q92925 531 aa10.66□□□□□ -0.7
HERC1-210ENST00000560897 ZFP42Q96MM3 310 aa10.66□□□□□ -0.7
HERC1-210ENST00000560897 ASB16Q96NS5 453 aa10.66□□□□□ -0.7
HERC1-210ENST00000560897 GIT1Q9Y2X7 761 aa10.66□□□□□ -0.7
HERC1-210ENST00000560897 PCDHB15Q9Y5E8 787 aa10.66□□□□□ -0.7
HERC1-210ENST00000560897 COL4A3BPQ9Y5P4 624 aa10.66□□□□□ -0.7
HERC1-210ENST00000560897 IGSF10Q6WRI0 2623 aa10.66□□□□□ -0.7
HERC1-210ENST00000560897 SLC38A8A6NNN8 435 aa10.65□□□□□ -0.7
HERC1-210ENST00000560897 ATG13O75143 517 aa10.65□□□□□ -0.7
HERC1-210ENST00000560897 ELF1P32519 619 aa10.65□□□□□ -0.7
HERC1-210ENST00000560897 SIM1P81133 766 aaPredicted RBP10.65□□□□□ -0.7
HERC1-210ENST00000560897 RAB33AQ14088 237 aa10.65□□□□□ -0.7
HERC1-210ENST00000560897 TARBP2Q15633 366 aaKnown RBP10.65□□□□□ -0.7
HERC1-210ENST00000560897 PRR16Q569H4 304 aa10.65□□□□□ -0.7
HERC1-210ENST00000560897 XKR3Q5GH77 459 aa10.65□□□□□ -0.7
HERC1-210ENST00000560897 UBXN11Q5T124 520 aa10.65□□□□□ -0.7
HERC1-210ENST00000560897 CYP4A22Q5TCH4 519 aa10.65□□□□□ -0.7
HERC1-210ENST00000560897 WWC2Q6AWC2 1192 aa10.65□□□□□ -0.7
HERC1-210ENST00000560897 NOTUMQ6P988 496 aa10.65□□□□□ -0.7
HERC1-210ENST00000560897 ELMOD1Q8N336 334 aa10.65□□□□□ -0.7
HERC1-210ENST00000560897 SMG8Q8ND04 991 aaKnown RBP10.65□□□□□ -0.7
HERC1-210ENST00000560897 RABGGTAQ92696 567 aa10.65□□□□□ -0.7
HERC1-210ENST00000560897 E2F7Q96AV8 911 aa10.65□□□□□ -0.7
HERC1-210ENST00000560897 CCDC51Q96ER9 411 aa10.65□□□□□ -0.7
HERC1-210ENST00000560897 LRIG1Q96JA1 1093 aa10.65□□□□□ -0.7
HERC1-210ENST00000560897 BBC3Q96PG8 261 aaPredicted RBP10.65□□□□□ -0.7
HERC1-210ENST00000560897 CORO1BQ9BR76 489 aa10.65□□□□□ -0.7
HERC1-210ENST00000560897 NUP205Q92621 2012 aa10.65□□□□□ -0.71
HERC1-210ENST00000560897 ASCC3Q8N3C0 2202 aaKnown RBP10.65□□□□□ -0.71
HERC1-210ENST00000560897 ACACAQ13085 2346 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 ITPR1Q14643 2758 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 IGLV3-22A0A075B6J6 115 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 IGKV6-21A0A0C4DH24 114 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 BCLAF3A2AJT9 711 aaKnown RBP10.64□□□□□ -0.71
HERC1-210ENST00000560897 WDR27A2RRH5 827 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 SMCO2A6NFE2 343 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 SPECC1L-ADORA2AF8WAN1 911 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 PRRG1O14668 218 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 EXTL3O43909 919 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 GAS7O60861 476 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 SRGAP2CP0DJJ0 459 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 RXRAP19793 462 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 GBP1P32455 592 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 OR1D2P34982 312 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 SOX9P48436 509 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 SPIRE1Q08AE8 756 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 SCAPQ12770 1279 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 PON2Q15165 354 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 UGCGQ16739 394 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 JAKMIP3Q5VZ66 844 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 IQCEQ6IPM2 695 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 HAUS6Q7Z4H7 955 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 RALGPS2Q86X27 583 aaPredicted RBP10.64□□□□□ -0.71
HERC1-210ENST00000560897 MFSD6LQ8IWD5 586 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 TMTC2Q8N394 836 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 IGDCC4Q8TDY8 1250 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 HNRNPLLQ8WVV9 542 aaKnown RBP10.64□□□□□ -0.71
HERC1-210ENST00000560897 NIFKQ9BYG3 293 aaKnown RBP10.64□□□□□ -0.71
HERC1-210ENST00000560897 SLITRK6Q9H5Y7 841 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 CCDC86Q9H6F5 360 aaKnown RBP10.64□□□□□ -0.71
HERC1-210ENST00000560897 IFT122Q9HBG6 1241 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 C2orf42Q9NWW7 574 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 MIOSQ9NXC5 875 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 HES2Q9Y543 173 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 LAMA1P25391 3075 aa10.64□□□□□ -0.71
HERC1-210ENST00000560897 PCNX2A6NKB5 2137 aa10.63□□□□□ -0.71
HERC1-210ENST00000560897 HEPACAM2A8MVW5 462 aa10.63□□□□□ -0.71
HERC1-210ENST00000560897 hCG_1984214I3L0E3 225 aa10.63□□□□□ -0.71
HERC1-210ENST00000560897 ADAM12O43184 909 aa10.63□□□□□ -0.71
HERC1-210ENST00000560897 MAFO75444 373 aaPredicted RBP10.63□□□□□ -0.71
HERC1-210ENST00000560897 MICAL2O94851 1124 aa10.63□□□□□ -0.71
HERC1-210ENST00000560897 CYP3A4P08684 503 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms