RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 CDR2LQ86X02 465 aaPredicted RBP13.33□□□□□ -0.28
MARK3-221ENST00000560603 MCPH1Q8NEM0 835 aa13.33□□□□□ -0.28
MARK3-221ENST00000560603 LNX1Q8TBB1 728 aaPredicted RBP13.33□□□□□ -0.28
MARK3-221ENST00000560603 ATRIPQ8WXE1 791 aa13.33□□□□□ -0.28
MARK3-221ENST00000560603 NELL2Q99435 816 aa13.33□□□□□ -0.28
MARK3-221ENST00000560603 CLSTN3Q9BQT9 956 aa13.33□□□□□ -0.28
MARK3-221ENST00000560603 ADPGKQ9BRR6 497 aa13.33□□□□□ -0.28
MARK3-221ENST00000560603 RPP25Q9BUL9 199 aaKnown RBP13.33□□□□□ -0.28
MARK3-221ENST00000560603 C2orf40Q9H1Z8 148 aa13.33□□□□□ -0.28
MARK3-221ENST00000560603 NCDNQ9UBB6 729 aa13.33□□□□□ -0.28
MARK3-221ENST00000560603 KCNH3Q9ULD8 1083 aa13.33□□□□□ -0.28
MARK3-221ENST00000560603 PCDHGA2Q9Y5H1 932 aa13.33□□□□□ -0.28
MARK3-221ENST00000560603 ARID2Q68CP9 1835 aa13.33□□□□□ -0.28
MARK3-221ENST00000560603 MED19A0JLT2 244 aaPredicted RBP13.32□□□□□ -0.28
MARK3-221ENST00000560603 CASTOR2A6NHX0 329 aa13.32□□□□□ -0.28
MARK3-221ENST00000560603 FAM170BA6NMN3 283 aa13.32□□□□□ -0.28
MARK3-221ENST00000560603 CCL16O15467 120 aa13.32□□□□□ -0.28
MARK3-221ENST00000560603 USO1O60763 962 aaKnown RBP13.32□□□□□ -0.28
MARK3-221ENST00000560603 KIF4AO95239 1232 aa13.32□□□□□ -0.28
MARK3-221ENST00000560603 KRT2P35908 639 aa13.32□□□□□ -0.28
MARK3-221ENST00000560603 NTHL1P78549 312 aa13.32□□□□□ -0.28
MARK3-221ENST00000560603 SCRN1Q12765 414 aa13.32□□□□□ -0.28
MARK3-221ENST00000560603 FAM187BQ17R55 369 aa13.32□□□□□ -0.28
MARK3-221ENST00000560603 VARS2Q5ST30 1063 aaKnown RBP13.32□□□□□ -0.28
MARK3-221ENST00000560603 ZBTB41Q5SVQ8 909 aa13.32□□□□□ -0.28
MARK3-221ENST00000560603 AXDND1Q5T1B0 1012 aaPredicted RBP13.32□□□□□ -0.28
MARK3-221ENST00000560603 POTEGQ6S5H5 508 aa13.32□□□□□ -0.28
MARK3-221ENST00000560603 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.32□□□□□ -0.28
MARK3-221ENST00000560603 SUMF1Q8NBK3 374 aa13.32□□□□□ -0.28
MARK3-221ENST00000560603 ST13P5Q8NFI4 369 aaPredicted RBP13.32□□□□□ -0.28
MARK3-221ENST00000560603 SLC7A14Q8TBB6 771 aa13.32□□□□□ -0.28
MARK3-221ENST00000560603 OXER1Q8TDS5 423 aa13.32□□□□□ -0.28
MARK3-221ENST00000560603 HASPINQ8TF76 798 aa13.32□□□□□ -0.28
MARK3-221ENST00000560603 PAAF1Q9BRP4 392 aa13.32□□□□□ -0.28
MARK3-221ENST00000560603 DDX23Q9BUQ8 820 aaKnown RBP13.32□□□□□ -0.28
MARK3-221ENST00000560603 TTC12Q9H892 705 aaPredicted RBP13.32□□□□□ -0.28
MARK3-221ENST00000560603 DLL3Q9NYJ7 618 aa13.32□□□□□ -0.28
MARK3-221ENST00000560603 ORC3Q9UBD5 711 aaPredicted RBP13.32□□□□□ -0.28
MARK3-221ENST00000560603 MRPS17Q9Y2R5 130 aaKnown RBP13.32□□□□□ -0.28
MARK3-221ENST00000560603 MIA3Q5JRA6 1907 aa13.32□□□□□ -0.28
MARK3-221ENST00000560603 DOCK6Q96HP0 2047 aa13.32□□□□□ -0.28
MARK3-221ENST00000560603 POTEMA6NI47 508 aa13.31□□□□□ -0.28
MARK3-221ENST00000560603 TRAPPC3O43617 180 aa13.31□□□□□ -0.28
MARK3-221ENST00000560603 NEMFO60524 1076 aa13.31□□□□□ -0.28
MARK3-221ENST00000560603 CSTF1Q05048 431 aaKnown RBP13.31□□□□□ -0.28
MARK3-221ENST00000560603 RAB33AQ14088 237 aa13.31□□□□□ -0.28
MARK3-221ENST00000560603 MAPK6Q16659 721 aa13.31□□□□□ -0.28
MARK3-221ENST00000560603 PABPC1LQ4VXU2 614 aaKnown RBP13.31□□□□□ -0.28
MARK3-221ENST00000560603 APBB1IPQ7Z5R6 666 aaPredicted RBP13.31□□□□□ -0.28
MARK3-221ENST00000560603 MAML2Q8IZL2 1156 aaPredicted RBP13.31□□□□□ -0.28
MARK3-221ENST00000560603 DCLK2Q8N568 766 aa13.31□□□□□ -0.28
MARK3-221ENST00000560603 PIGOQ8TEQ8 1089 aa13.31□□□□□ -0.28
MARK3-221ENST00000560603 FZD8Q9H461 694 aa13.31□□□□□ -0.28
MARK3-221ENST00000560603 MRPS23Q9Y3D9 190 aaKnown RBP13.31□□□□□ -0.28
MARK3-221ENST00000560603 MYH15Q9Y2K3 1946 aa13.31□□□□□ -0.28
MARK3-221ENST00000560603 F5P12259 2224 aa13.3□□□□□ -0.28
MARK3-221ENST00000560603 PFKFB2O60825 505 aa13.3□□□□□ -0.28
MARK3-221ENST00000560603 LRRN2O75325 713 aa13.3□□□□□ -0.28
MARK3-221ENST00000560603 RECQL4O94761 1208 aa13.3□□□□□ -0.28
MARK3-221ENST00000560603 ATP2B1P20020 1258 aa13.3□□□□□ -0.28
MARK3-221ENST00000560603 OR1D2P34982 312 aa13.3□□□□□ -0.28
MARK3-221ENST00000560603 TXKP42681 527 aa13.3□□□□□ -0.28
MARK3-221ENST00000560603 PRPF4BQ13523 1007 aaKnown RBP13.3□□□□□ -0.28
MARK3-221ENST00000560603 RSPO4Q2I0M5 234 aaPredicted RBP13.3□□□□□ -0.28
MARK3-221ENST00000560603 CDCA2Q69YH5 1023 aaPredicted RBP13.3□□□□□ -0.28
MARK3-221ENST00000560603 ZNF852Q6ZMS4 543 aa13.3□□□□□ -0.28
MARK3-221ENST00000560603 MAEAQ7L5Y9 396 aa13.3□□□□□ -0.28
MARK3-221ENST00000560603 ITFG1Q8TB96 612 aa13.3□□□□□ -0.28
MARK3-221ENST00000560603 LTB4R2Q9NPC1 389 aa13.3□□□□□ -0.28
MARK3-221ENST00000560603 GJB4Q9NTQ9 266 aa13.3□□□□□ -0.28
MARK3-221ENST00000560603 ZSCAN32Q9NX65 697 aa13.3□□□□□ -0.28
MARK3-221ENST00000560603 SNTG2Q9NY99 539 aa13.3□□□□□ -0.28
MARK3-221ENST00000560603 GDE1Q9NZC3 331 aa13.3□□□□□ -0.28
MARK3-221ENST00000560603 CACNG4Q9UBN1 327 aa13.3□□□□□ -0.28
MARK3-221ENST00000560603 TMEM189-UBE2V1I3L0A0 370 aa13.29□□□□□ -0.28
MARK3-221ENST00000560603 ACKR2O00590 384 aa13.29□□□□□ -0.28
MARK3-221ENST00000560603 PTGESO14684 152 aa13.29□□□□□ -0.28
MARK3-221ENST00000560603 ECI2O75521 394 aa13.29□□□□□ -0.28
MARK3-221ENST00000560603 PRKCBP05771 671 aa13.29□□□□□ -0.28
MARK3-221ENST00000560603 FGFR3P22607 806 aa13.29□□□□□ -0.28
MARK3-221ENST00000560603 RPS9P46781 194 aaKnown RBP13.29□□□□□ -0.28
MARK3-221ENST00000560603 RBM25P49756 843 aaKnown RBP13.29□□□□□ -0.28
MARK3-221ENST00000560603 NR5A1Q13285 461 aa13.29□□□□□ -0.28
MARK3-221ENST00000560603 PPP2R5AQ15172 486 aa13.29□□□□□ -0.28
MARK3-221ENST00000560603 ANKRD1Q15327 319 aa13.29□□□□□ -0.28
MARK3-221ENST00000560603 DCAF4L1Q3SXM0 396 aa13.29□□□□□ -0.28
MARK3-221ENST00000560603 EARS2Q5JPH6 523 aaKnown RBP13.29□□□□□ -0.28
MARK3-221ENST00000560603 TPRG1Q6ZUI0 275 aa13.29□□□□□ -0.28
MARK3-221ENST00000560603 ANKS3Q6ZW76 656 aa13.29□□□□□ -0.28
MARK3-221ENST00000560603 NPAS3Q8IXF0 933 aa13.29□□□□□ -0.28
MARK3-221ENST00000560603 UROC1Q96N76 676 aa13.29□□□□□ -0.28
MARK3-221ENST00000560603 NACC1Q96RE7 527 aa13.29□□□□□ -0.28
MARK3-221ENST00000560603 KXD1Q9BQD3 176 aa13.29□□□□□ -0.28
MARK3-221ENST00000560603 FAM126AQ9BYI3 521 aaPredicted RBP13.29□□□□□ -0.28
MARK3-221ENST00000560603 PDZD7Q9H5P4 517 aa13.29□□□□□ -0.28
MARK3-221ENST00000560603 TUFT1Q9NNX1 390 aa13.29□□□□□ -0.28
MARK3-221ENST00000560603 GPRC5CQ9NQ84 441 aa13.29□□□□□ -0.28
MARK3-221ENST00000560603 MTRRQ9UBK8 725 aa13.29□□□□□ -0.28
MARK3-221ENST00000560603 BACE2Q9Y5Z0 518 aa13.29□□□□□ -0.28
MARK3-221ENST00000560603 FAM205CA6NFA0 338 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms