RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 ASAP3Q8TDY4 903 aa11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 ING5Q8WYH8 240 aa11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 TTPALQ9BTX7 342 aa11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 PHF20Q9BVI0 1012 aa11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 KRTAP3-3Q9BYR6 98 aa11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 KRTAP3-2Q9BYR7 98 aa11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 AGXT2Q9BYV1 514 aa11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 POLR3FQ9H1D9 316 aaPredicted RBP11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 KCNMB3Q9NPA1 279 aa11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 DLGAP2Q9P1A6 1054 aa11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 FBXW11Q9UKB1 542 aa11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 USP18Q9UMW8 372 aa11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 VWA8A3KMH1 1905 aa11.62□□□□□ -0.55
CDC42BPB-207ENST00000560492 M0R2N6 131 aa11.62□□□□□ -0.55
CDC42BPB-207ENST00000560492 SPTLC1O15269 473 aa11.62□□□□□ -0.55
CDC42BPB-207ENST00000560492 USO1O60763 962 aaKnown RBP11.62□□□□□ -0.55
CDC42BPB-207ENST00000560492 CDKL5O76039 1030 aa11.62□□□□□ -0.55
CDC42BPB-207ENST00000560492 HNRNPA1P09651 372 aaKnown RBP eCLIP11.62□□□□□ -0.55
CDC42BPB-207ENST00000560492 STARD6P59095 220 aa11.62□□□□□ -0.55
CDC42BPB-207ENST00000560492 PRKCQQ04759 706 aa11.62□□□□□ -0.55
CDC42BPB-207ENST00000560492 TUSC3Q13454 348 aa11.62□□□□□ -0.55
CDC42BPB-207ENST00000560492 TOB2Q14106 344 aaPredicted RBP11.62□□□□□ -0.55
CDC42BPB-207ENST00000560492 SLC44A4Q53GD3 710 aa11.62□□□□□ -0.55
CDC42BPB-207ENST00000560492 LILRA6Q6PI73 481 aa11.62□□□□□ -0.55
CDC42BPB-207ENST00000560492 TPRG1Q6ZUI0 275 aa11.62□□□□□ -0.55
CDC42BPB-207ENST00000560492 ZBTB8OSQ8IWT0 167 aa11.62□□□□□ -0.55
CDC42BPB-207ENST00000560492 SLFN12Q8IYM2 578 aa11.62□□□□□ -0.55
CDC42BPB-207ENST00000560492 FBXL16Q8N461 479 aa11.62□□□□□ -0.55
CDC42BPB-207ENST00000560492 FGF13Q92913 245 aa11.62□□□□□ -0.55
CDC42BPB-207ENST00000560492 EIF2AK1Q9BQI3 630 aaKnown RBP11.62□□□□□ -0.55
CDC42BPB-207ENST00000560492 PAAF1Q9BRP4 392 aa11.62□□□□□ -0.55
CDC42BPB-207ENST00000560492 XPNPEP1Q9NQW7 623 aa11.62□□□□□ -0.55
CDC42BPB-207ENST00000560492 CDV3Q9UKY7 258 aaKnown RBP11.62□□□□□ -0.55
CDC42BPB-207ENST00000560492 CACNA1AO00555 2505 aa11.62□□□□□ -0.55
CDC42BPB-207ENST00000560492 TRIP11Q15643 1979 aa11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 TBX3O15119 743 aa11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 NCAM2O15394 837 aa11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 DGAT1O75907 488 aa11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 KIF4AO95239 1232 aa11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 C1RP00736 705 aa11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 THP07101 528 aa11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 NEFLP07196 543 aa11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 ELAVL2Q12926 359 aaKnown RBP11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 PABPC1LQ4VXU2 614 aaKnown RBP11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 ZBTB41Q5SVQ8 909 aa11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 AXDND1Q5T1B0 1012 aaPredicted RBP11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 PDXDC1Q6P996 788 aa11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 GPR65Q8IYL9 337 aa11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 ITFG1Q8TB96 612 aa11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 PIGOQ8TEQ8 1089 aa11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 HAS1Q92839 578 aa11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 KCNB2Q92953 911 aa11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 ZNF274Q96GC6 653 aaPredicted RBP11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 ADPGKQ9BRR6 497 aa11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 BRMS1Q9HCU9 246 aa11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 LTB4R2Q9NPC1 389 aa11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 HCFC1R1Q9NWW0 138 aa11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 FBXO4Q9UKT5 387 aa11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 RAB23Q9ULC3 237 aa11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 SMG5Q9UPR3 1016 aaKnown RBP11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 MRPS23Q9Y3D9 190 aaKnown RBP11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 MTF2Q9Y483 593 aaPredicted RBP11.61□□□□□ -0.55
CDC42BPB-207ENST00000560492 RALGAPA1Q6GYQ0 2036 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 A0A087WWV3 80 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 DTNBO60941 627 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 EFEMP2O95967 443 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 SDHBP21912 280 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 GLRA2P23416 452 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 OR1D2P34982 312 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 NPY5RQ15761 445 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 CALCRLQ16602 461 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 AMHR2Q16671 573 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 TSSK4Q6SA08 328 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 FAM177A1Q8N128 213 aaPredicted RBP11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 GPR161Q8N6U8 529 aaKnown RBP11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 SUMF1Q8NBK3 374 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 OXER1Q8TDS5 423 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 PIK3R5Q8WYR1 880 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 MCRS1Q96EZ8 462 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 CNTNAP3BQ96NU0 1288 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 CLSTN3Q9BQT9 956 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 CNTNAP3Q9BZ76 1288 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 GJB4Q9NTQ9 266 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 SNTG2Q9NY99 539 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 DLL3Q9NYJ7 618 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 GMEB2Q9UKD1 530 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 NDRG2Q9UN36 371 aaKnown RBP11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 PCDHA12Q9UN75 941 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 GDAQ9Y2T3 454 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 PCDHGA2Q9Y5H1 932 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 OTOGLQ3ZCN5 2332 aa11.6□□□□□ -0.55
CDC42BPB-207ENST00000560492 TICRRQ7Z2Z1 1910 aa11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 N4BP3O15049 544 aa11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 ADAM12O43184 909 aa11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 RECQL4O94761 1208 aa11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 SLITRK3O94933 977 aa11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 LRG1P02750 347 aa11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 HOXB1P14653 301 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 ARL2P36404 184 aa11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 TXKP42681 527 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms