RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 CASTOR2A6NHX0 329 aa15.44■□□□□ 0.06
TPM1-223ENST00000560445 HNRNPA1P09651 372 aaKnown RBP eCLIP15.44■□□□□ 0.06
TPM1-223ENST00000560445 DCLRE1AQ6PJP8 1040 aa15.44■□□□□ 0.06
TPM1-223ENST00000560445 MPZL3Q6UWV2 235 aa15.44■□□□□ 0.06
TPM1-223ENST00000560445 ZPBP2Q6X784 338 aa15.44■□□□□ 0.06
TPM1-223ENST00000560445 NXPE3Q969Y0 559 aa15.44■□□□□ 0.06
TPM1-223ENST00000560445 ACO2Q99798 780 aaKnown RBP15.44■□□□□ 0.06
TPM1-223ENST00000560445 RUSC1Q9BVN2 902 aa15.44■□□□□ 0.06
TPM1-223ENST00000560445 IGSF9Q9P2J2 1179 aa15.44■□□□□ 0.06
TPM1-223ENST00000560445 RAPGEFL1Q9UHV5 662 aa15.44■□□□□ 0.06
TPM1-223ENST00000560445 ZFP37Q9Y6Q3 630 aaPredicted RBP15.44■□□□□ 0.06
TPM1-223ENST00000560445 DENND4AQ7Z401 1863 aa15.44■□□□□ 0.06
TPM1-223ENST00000560445 CCDC195A0A1B0GUA6 201 aa15.43■□□□□ 0.06
TPM1-223ENST00000560445 PP2D1A8MPX8 630 aa15.43■□□□□ 0.06
TPM1-223ENST00000560445 PTGESO14684 152 aa15.43■□□□□ 0.06
TPM1-223ENST00000560445 XYLBO75191 536 aa15.43■□□□□ 0.06
TPM1-223ENST00000560445 TOM1L1O75674 476 aa15.43■□□□□ 0.06
TPM1-223ENST00000560445 B3GAT3O94766 335 aa15.43■□□□□ 0.06
TPM1-223ENST00000560445 KIF4AO95239 1232 aa15.43■□□□□ 0.06
TPM1-223ENST00000560445 BRD1O95696 1058 aa15.43■□□□□ 0.06
TPM1-223ENST00000560445 PLA2G4BP0C869 781 aa15.43■□□□□ 0.06
TPM1-223ENST00000560445 SP100P23497 879 aaPredicted RBP15.43■□□□□ 0.06
TPM1-223ENST00000560445 TXLNAP40222 546 aa15.43■□□□□ 0.06
TPM1-223ENST00000560445 PTPN5P54829 565 aa15.43■□□□□ 0.06
TPM1-223ENST00000560445 PSMD5Q16401 504 aa15.43■□□□□ 0.06
TPM1-223ENST00000560445 NT5DC1Q5TFE4 455 aa15.43■□□□□ 0.06
TPM1-223ENST00000560445 FAM171A1Q5VUB5 890 aa15.43■□□□□ 0.06
TPM1-223ENST00000560445 SMG7Q92540 1137 aaKnown RBP15.43■□□□□ 0.06
TPM1-223ENST00000560445 ACAP3Q96P50 834 aa15.43■□□□□ 0.06
TPM1-223ENST00000560445 MMTAG2Q9BU76 263 aaKnown RBP15.43■□□□□ 0.06
TPM1-223ENST00000560445 GPR62Q9BZJ7 368 aa15.43■□□□□ 0.06
TPM1-223ENST00000560445 WDR6Q9NNW5 1121 aaKnown RBP15.43■□□□□ 0.06
TPM1-223ENST00000560445 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.43■□□□□ 0.06
TPM1-223ENST00000560445 MYH11P35749 1972 aa15.43■□□□□ 0.06
TPM1-223ENST00000560445 PIEZO1Q92508 2521 aa15.43■□□□□ 0.06
TPM1-223ENST00000560445 CLUHO75153 1309 aa15.43■□□□□ 0.06
TPM1-223ENST00000560445 ZNF318Q5VUA4 2279 aa15.42■□□□□ 0.06
TPM1-223ENST00000560445 TBCAO75347 108 aaKnown RBP15.42■□□□□ 0.06
TPM1-223ENST00000560445 PAPLNO95428 1278 aa15.42■□□□□ 0.06
TPM1-223ENST00000560445 KRT18P05783 430 aaKnown RBP15.42■□□□□ 0.06
TPM1-223ENST00000560445 CDC25AP30304 524 aa15.42■□□□□ 0.06
TPM1-223ENST00000560445 HOXA9P31269 272 aa15.42■□□□□ 0.06
TPM1-223ENST00000560445 RPL9P32969 192 aaKnown RBP15.42■□□□□ 0.06
TPM1-223ENST00000560445 NOLC1Q14978 699 aaKnown RBP eCLIP15.42■□□□□ 0.06
TPM1-223ENST00000560445 IL17AQ16552 155 aa15.42■□□□□ 0.06
TPM1-223ENST00000560445 TMEM119Q4V9L6 283 aa15.42■□□□□ 0.06
TPM1-223ENST00000560445 EEF1DP3Q658K8 133 aa15.42■□□□□ 0.06
TPM1-223ENST00000560445 ANKS3Q6ZW76 656 aa15.42■□□□□ 0.06
TPM1-223ENST00000560445 TAS1R1Q7RTX1 841 aa15.42■□□□□ 0.06
TPM1-223ENST00000560445 CEP57Q86XR8 500 aa15.42■□□□□ 0.06
TPM1-223ENST00000560445 BICD1Q96G01 975 aa15.42■□□□□ 0.06
TPM1-223ENST00000560445 PPP1R10Q96QC0 940 aaKnown RBP15.42■□□□□ 0.06
TPM1-223ENST00000560445 TSPAN18Q96SJ8 248 aa15.42■□□□□ 0.06
TPM1-223ENST00000560445 CDT1Q9H211 546 aa15.42■□□□□ 0.06
TPM1-223ENST00000560445 MTCL1Q9Y4B5 1905 aaKnown RBP15.42■□□□□ 0.06
TPM1-223ENST00000560445 VPS37CA5D8V6 355 aaPredicted RBP15.41■□□□□ 0.06
TPM1-223ENST00000560445 TTLL13PA6NNM8 815 aa15.41■□□□□ 0.06
TPM1-223ENST00000560445 SLC16A4O15374 487 aa15.41■□□□□ 0.06
TPM1-223ENST00000560445 CLDN3O15551 220 aa15.41■□□□□ 0.06
TPM1-223ENST00000560445 TGM5O43548 720 aa15.41■□□□□ 0.06
TPM1-223ENST00000560445 XPOTO43592 962 aaKnown RBP15.41■□□□□ 0.06
TPM1-223ENST00000560445 WEE2P0C1S8 567 aa15.41■□□□□ 0.06
TPM1-223ENST00000560445 KCNE1P15382 129 aa15.41■□□□□ 0.06
TPM1-223ENST00000560445 MATR3P43243 847 aaKnown RBP eCLIP15.41■□□□□ 0.06
TPM1-223ENST00000560445 MAPK7Q13164 816 aa15.41■□□□□ 0.06
TPM1-223ENST00000560445 TDGQ13569 410 aa15.41■□□□□ 0.06
TPM1-223ENST00000560445 CUL4AQ13619 759 aa15.41■□□□□ 0.06
TPM1-223ENST00000560445 PALB2Q86YC2 1186 aa15.41■□□□□ 0.06
TPM1-223ENST00000560445 DAW1Q8N136 415 aa15.41■□□□□ 0.06
TPM1-223ENST00000560445 KCNN1Q92952 543 aa15.41■□□□□ 0.06
TPM1-223ENST00000560445 TARS2Q9BW92 718 aaKnown RBP15.41■□□□□ 0.06
TPM1-223ENST00000560445 PRKD2Q9BZL6 878 aa15.41■□□□□ 0.06
TPM1-223ENST00000560445 MFSD1Q9H3U5 465 aa15.41■□□□□ 0.06
TPM1-223ENST00000560445 PLEKHA5Q9HAU0 1116 aa15.41■□□□□ 0.06
TPM1-223ENST00000560445 PTPRHQ9HD43 1115 aa15.41■□□□□ 0.06
TPM1-223ENST00000560445 CCDC39Q9UFE4 941 aa15.41■□□□□ 0.06
TPM1-223ENST00000560445 ZDBF2Q9HCK1 2354 aa15.41■□□□□ 0.06
TPM1-223ENST00000560445 CITO14578 2027 aa15.41■□□□□ 0.06
TPM1-223ENST00000560445 PLXNA3P51805 1871 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 SMIM28A0A1B0GU29 152 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 H7C4K7 107 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 ZMYND10O75800 440 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 FAM13AO94988 1023 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 POU2F2P09086 479 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 PDIA4P13667 645 aaKnown RBP15.4■□□□□ 0.06
TPM1-223ENST00000560445 FGFR3P22607 806 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 PROZP22891 400 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 PAX3P23760 479 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 GBP2P32456 591 aaPredicted RBP15.4■□□□□ 0.06
TPM1-223ENST00000560445 SLC12A3P55017 1021 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 NAB2Q15742 525 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 UVSSAQ2YD98 709 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 XKR4Q5GH76 650 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 RTP2Q5QGT7 225 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 PPM1LQ5SGD2 360 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 KCNK18Q7Z418 384 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 GPBP1Q86WP2 473 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 TMEM161BQ8NDZ6 487 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 HASPINQ8TF76 798 aa15.4■□□□□ 0.06
TPM1-223ENST00000560445 ASIC4Q96FT7 647 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms