RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 SMCO2A6NFE2 343 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 CCDC69A6NI79 296 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 MAFO75444 373 aaPredicted RBP11.51□□□□□ -0.57
APH1B-208ENST00000560353 RPP40O75818 363 aaKnown RBP11.51□□□□□ -0.57
APH1B-208ENST00000560353 TOP3BO95985 862 aaKnown RBP11.51□□□□□ -0.57
APH1B-208ENST00000560353 CCNE1P24864 410 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 MPLP40238 635 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 MLH1P40692 756 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 SCNN1GP51170 649 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 PLCB2Q00722 1185 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 CAMK2BQ13554 666 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 E2F4Q16254 413 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 MTERF2Q49AM1 385 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 XKR3Q5GH77 459 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 DGKKQ5KSL6 1271 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 RTP2Q5QGT7 225 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 WWC2Q6AWC2 1192 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 PDXDC1Q6P996 788 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 MAP4K3Q8IVH8 894 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 KSR1Q8IVT5 923 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 CRYGNQ8WXF5 182 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 PIK3R5Q8WYR1 880 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 MSANTD3Q96H12 275 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 ZFP42Q96MM3 310 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 JPH2Q9BR39 696 aaPredicted RBP11.51□□□□□ -0.57
APH1B-208ENST00000560353 MTA3Q9BTC8 594 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 TTPALQ9BTX7 342 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 IFT122Q9HBG6 1241 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 AVENQ9NQS1 362 aaPredicted RBP11.51□□□□□ -0.57
APH1B-208ENST00000560353 MIOSQ9NXC5 875 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 SEPT9Q9UHD8 586 aaPredicted RBP11.51□□□□□ -0.57
APH1B-208ENST00000560353 NEUROG3Q9Y4Z2 214 aa11.51□□□□□ -0.57
APH1B-208ENST00000560353 C4orf47A7E2U8 309 aa11.5□□□□□ -0.57
APH1B-208ENST00000560353 RHOP08100 348 aa11.5□□□□□ -0.57
APH1B-208ENST00000560353 PSMC3P17980 439 aa11.5□□□□□ -0.57
APH1B-208ENST00000560353 CSRP1P21291 193 aaKnown RBP11.5□□□□□ -0.57
APH1B-208ENST00000560353 FCARP24071 287 aa11.5□□□□□ -0.57
APH1B-208ENST00000560353 GDI1P31150 447 aa11.5□□□□□ -0.57
APH1B-208ENST00000560353 SFNP31947 248 aa11.5□□□□□ -0.57
APH1B-208ENST00000560353 CLK2P49760 499 aaKnown RBP11.5□□□□□ -0.57
APH1B-208ENST00000560353 RAB33AQ14088 237 aa11.5□□□□□ -0.57
APH1B-208ENST00000560353 PSMD5Q16401 504 aa11.5□□□□□ -0.57
APH1B-208ENST00000560353 UGCGQ16739 394 aa11.5□□□□□ -0.57
APH1B-208ENST00000560353 FAM78AQ5JUQ0 283 aa11.5□□□□□ -0.57
APH1B-208ENST00000560353 TYW1BQ6NUM6 668 aa11.5□□□□□ -0.57
APH1B-208ENST00000560353 CASC1Q6TDU7 716 aa11.5□□□□□ -0.57
APH1B-208ENST00000560353 TMTC3Q6ZXV5 915 aa11.5□□□□□ -0.57
APH1B-208ENST00000560353 SRGAP1Q7Z6B7 1085 aa11.5□□□□□ -0.57
APH1B-208ENST00000560353 KBTBD6Q86V97 674 aa11.5□□□□□ -0.57
APH1B-208ENST00000560353 FANCBQ8NB91 859 aa11.5□□□□□ -0.57
APH1B-208ENST00000560353 LNX1Q8TBB1 728 aaPredicted RBP11.5□□□□□ -0.57
APH1B-208ENST00000560353 ZC3H10Q96K80 434 aaKnown RBP11.5□□□□□ -0.57
APH1B-208ENST00000560353 CEP89Q96ST8 783 aa11.5□□□□□ -0.57
APH1B-208ENST00000560353 EDEM2Q9BV94 578 aa11.5□□□□□ -0.57
APH1B-208ENST00000560353 IPPQ9Y573 584 aa11.5□□□□□ -0.57
APH1B-208ENST00000560353 GREB1Q4ZG55 1949 aa11.5□□□□□ -0.57
APH1B-208ENST00000560353 DOCK6Q96HP0 2047 aa11.5□□□□□ -0.57
APH1B-208ENST00000560353 CCDC163A0A0D9SF12 145 aa11.49□□□□□ -0.57
APH1B-208ENST00000560353 ZNF263O14978 683 aa11.49□□□□□ -0.57
APH1B-208ENST00000560353 AKAP3O75969 853 aa11.49□□□□□ -0.57
APH1B-208ENST00000560353 MICAL2O94851 1124 aa11.49□□□□□ -0.57
APH1B-208ENST00000560353 CEBPBP17676 345 aa11.49□□□□□ -0.57
APH1B-208ENST00000560353 PTPN2P17706 415 aa11.49□□□□□ -0.57
APH1B-208ENST00000560353 RXRAP19793 462 aa11.49□□□□□ -0.57
APH1B-208ENST00000560353 JAK3P52333 1124 aa11.49□□□□□ -0.57
APH1B-208ENST00000560353 NCBP1Q09161 790 aaKnown RBP11.49□□□□□ -0.57
APH1B-208ENST00000560353 HSP90AA2PQ14568 343 aaPredicted RBP11.49□□□□□ -0.57
APH1B-208ENST00000560353 SLC5A9Q2M3M2 681 aa11.49□□□□□ -0.57
APH1B-208ENST00000560353 PRR16Q569H4 304 aa11.49□□□□□ -0.57
APH1B-208ENST00000560353 FAM171A1Q5VUB5 890 aa11.49□□□□□ -0.57
APH1B-208ENST00000560353 PDZD3Q86UT5 571 aa11.49□□□□□ -0.57
APH1B-208ENST00000560353 CEP57Q86XR8 500 aa11.49□□□□□ -0.57
APH1B-208ENST00000560353 MB21D2Q8IYB1 491 aaPredicted RBP11.49□□□□□ -0.57
APH1B-208ENST00000560353 HACE1Q8IYU2 909 aa11.49□□□□□ -0.57
APH1B-208ENST00000560353 CCDC51Q96ER9 411 aa11.49□□□□□ -0.57
APH1B-208ENST00000560353 APOL6Q9BWW8 343 aa11.49□□□□□ -0.57
APH1B-208ENST00000560353 SMOC1Q9H4F8 434 aa11.49□□□□□ -0.57
APH1B-208ENST00000560353 GIT1Q9Y2X7 761 aa11.49□□□□□ -0.57
APH1B-208ENST00000560353 MSRB2Q9Y3D2 182 aa11.49□□□□□ -0.57
APH1B-208ENST00000560353 COL4A3BPQ9Y5P4 624 aa11.49□□□□□ -0.57
APH1B-208ENST00000560353 EIF4E1BA6NMX2 242 aaKnown RBP11.48□□□□□ -0.57
APH1B-208ENST00000560353 hCG_1984214I3L0E3 225 aa11.48□□□□□ -0.57
APH1B-208ENST00000560353 ZNF197O14709 1029 aa11.48□□□□□ -0.57
APH1B-208ENST00000560353 ADAM12O43184 909 aa11.48□□□□□ -0.57
APH1B-208ENST00000560353 SRGAP2CP0DJJ0 459 aa11.48□□□□□ -0.57
APH1B-208ENST00000560353 CCDC192P0DO97 292 aa11.48□□□□□ -0.57
APH1B-208ENST00000560353 JAKMIP3Q5VZ66 844 aa11.48□□□□□ -0.57
APH1B-208ENST00000560353 TCEAL6Q6IPX3 200 aa11.48□□□□□ -0.57
APH1B-208ENST00000560353 Q6ZS52 159 aa11.48□□□□□ -0.57
APH1B-208ENST00000560353 SYNPOQ8N3V7 929 aa11.48□□□□□ -0.57
APH1B-208ENST00000560353 ZNF713Q8N859 430 aaPredicted RBP11.48□□□□□ -0.57
APH1B-208ENST00000560353 ZNF454Q8N9F8 522 aa11.48□□□□□ -0.57
APH1B-208ENST00000560353 CSGALNACT1Q8TDX6 532 aa11.48□□□□□ -0.57
APH1B-208ENST00000560353 DEPDC1BQ8WUY9 529 aa11.48□□□□□ -0.57
APH1B-208ENST00000560353 RABGGTAQ92696 567 aa11.48□□□□□ -0.57
APH1B-208ENST00000560353 SMARCD2Q92925 531 aa11.48□□□□□ -0.57
APH1B-208ENST00000560353 TCEAL3Q969E4 200 aa11.48□□□□□ -0.57
APH1B-208ENST00000560353 ASB16Q96NS5 453 aa11.48□□□□□ -0.57
APH1B-208ENST00000560353 RIT2Q99578 217 aa11.48□□□□□ -0.57
APH1B-208ENST00000560353 LNPKQ9C0E8 428 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms