RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, humanhuman

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-208ENST00000560328 IL18RAPO95256 599 aa9.9□□□□□ -0.82
NEO1-208ENST00000560328 MMEP08473 750 aa9.9□□□□□ -0.82
NEO1-208ENST00000560328 CYP2C9P11712 490 aa9.9□□□□□ -0.82
NEO1-208ENST00000560328 CPB1P15086 417 aa9.9□□□□□ -0.82
NEO1-208ENST00000560328 RGS7P49802 495 aa9.9□□□□□ -0.82
NEO1-208ENST00000560328 MMP14P50281 582 aa9.9□□□□□ -0.82
NEO1-208ENST00000560328 PDIA2Q13087 525 aaKnown RBP9.9□□□□□ -0.82
NEO1-208ENST00000560328 ZC3H18Q86VM9 953 aaKnown RBP9.9□□□□□ -0.82
NEO1-208ENST00000560328 SENP7Q9BQF6 1050 aa9.9□□□□□ -0.82
NEO1-208ENST00000560328 GPRC5CQ9NQ84 441 aa9.9□□□□□ -0.82
NEO1-208ENST00000560328 KCNQ5Q9NR82 932 aa9.9□□□□□ -0.82
NEO1-208ENST00000560328 ADAM21Q9UKJ8 722 aa9.9□□□□□ -0.82
NEO1-208ENST00000560328 GOLGA8QA0A0J9YX86 632 aa9.9□□□□□ -0.83
NEO1-208ENST00000560328 TARSL2A2RTX5 802 aaKnown RBP9.9□□□□□ -0.83
NEO1-208ENST00000560328 GOLGA8OA6NCC3 632 aa9.9□□□□□ -0.83
NEO1-208ENST00000560328 GOLGA8NF8WBI6 632 aa9.9□□□□□ -0.83
NEO1-208ENST00000560328 NFIBO00712 420 aa9.9□□□□□ -0.83
NEO1-208ENST00000560328 MAGOHP61326 146 aaKnown RBP9.9□□□□□ -0.83
NEO1-208ENST00000560328 NOP14P78316 857 aaKnown RBP9.9□□□□□ -0.83
NEO1-208ENST00000560328 KRT17Q04695 432 aa9.9□□□□□ -0.83
NEO1-208ENST00000560328 C9orf131Q5VYM1 1079 aa9.9□□□□□ -0.83
NEO1-208ENST00000560328 FAM83AQ86UY5 434 aa9.9□□□□□ -0.83
NEO1-208ENST00000560328 ERO1BQ86YB8 467 aa9.9□□□□□ -0.83
NEO1-208ENST00000560328 SRRM1Q8IYB3 904 aaKnown RBP9.9□□□□□ -0.83
NEO1-208ENST00000560328 VPS39Q96JC1 886 aa9.9□□□□□ -0.83
NEO1-208ENST00000560328 MID2Q9UJV3 735 aa9.9□□□□□ -0.83
NEO1-208ENST00000560328 PCDHB2Q9Y5E7 798 aa9.9□□□□□ -0.83
NEO1-208ENST00000560328 H3BRJ5 948 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 PDGFRBP09619 1106 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 GIT2Q14161 759 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 SPARCL1Q14515 664 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 DBN1Q16643 649 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 KLHL38Q2WGJ6 581 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 IZUMO3Q5VZ72 239 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 BTBD8Q5XKL5 378 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 ATG16L1Q676U5 607 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 CDKL3Q8IVW4 592 aaPredicted RBP9.89□□□□□ -0.83
NEO1-208ENST00000560328 ZBED8Q8IZ13 594 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 TTC17Q96AE7 1141 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 STILQ15468 1287 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 APOBEC3HQ6NTF7 200 aaKnown RBP9.89□□□□□ -0.83
NEO1-208ENST00000560328 WEE2P0C1S8 567 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 PDGFRAP16234 1089 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 HOXA10P31260 410 aaPredicted RBP9.89□□□□□ -0.83
NEO1-208ENST00000560328 SERPINB6P35237 376 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 ARSEP51690 589 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 VSNL1P62760 191 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 EARS2Q5JPH6 523 aaKnown RBP9.89□□□□□ -0.83
NEO1-208ENST00000560328 KLC3Q6P597 504 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 EPM2AIP1Q7L775 607 aaPredicted RBP9.89□□□□□ -0.83
NEO1-208ENST00000560328 RCOR2Q8IZ40 523 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 KLHL29Q96CT2 875 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 FAM163AQ96GL9 167 aaPredicted RBP9.89□□□□□ -0.83
NEO1-208ENST00000560328 TMEM117Q9H0C3 514 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 WDR35Q9P2L0 1181 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 HPCAL4Q9UM19 191 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 RRP15Q9Y3B9 282 aaKnown RBP9.89□□□□□ -0.83
NEO1-208ENST00000560328 A0A087WUV0 522 aaPredicted RBP9.89□□□□□ -0.83
NEO1-208ENST00000560328 ZBBXA8MT70 800 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 APOL1O14791 398 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 PGK2P07205 417 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 ZFXP17010 805 aaPredicted RBP9.89□□□□□ -0.83
NEO1-208ENST00000560328 GTF2A2P52657 109 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 TAF1BQ53T94 588 aaPredicted RBP9.89□□□□□ -0.83
NEO1-208ENST00000560328 DACT2Q5SW24 774 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 RBM43Q6ZSC3 357 aaKnown RBP9.89□□□□□ -0.83
NEO1-208ENST00000560328 ATL2Q8NHH9 583 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 SYN2Q92777 582 aaPredicted RBP9.89□□□□□ -0.83
NEO1-208ENST00000560328 MCEEQ96PE7 176 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 NUDT12Q9BQG2 462 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 PITPNM3Q9BZ71 974 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 RPS6KA5O75582 802 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 TAL1P17542 331 aaPredicted RBP9.89□□□□□ -0.83
NEO1-208ENST00000560328 MUTP22033 750 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 CDK17Q00537 523 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 NR1H3Q13133 447 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 PCNX4Q63HM2 1172 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 ELMSAN1Q6PJG2 1045 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 MAML1Q92585 1016 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 IFT43Q96FT9 208 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 ELAC2Q9BQ52 826 aaKnown RBP9.89□□□□□ -0.83
NEO1-208ENST00000560328 FBXL5Q9UKA1 691 aa9.89□□□□□ -0.83
NEO1-208ENST00000560328 CDR2LQ86X02 465 aaPredicted RBP9.88□□□□□ -0.83
NEO1-208ENST00000560328 ELMOD1Q8N336 334 aa9.88□□□□□ -0.83
NEO1-208ENST00000560328 SAMD3Q8N6K7 520 aa9.88□□□□□ -0.83
NEO1-208ENST00000560328 PPM1NQ8N819 430 aa9.88□□□□□ -0.83
NEO1-208ENST00000560328 CACYBPQ9HB71 228 aaKnown RBP9.88□□□□□ -0.83
NEO1-208ENST00000560328 PXMP2Q9NR77 195 aa9.88□□□□□ -0.83
NEO1-208ENST00000560328 TTI1O43156 1089 aa9.88□□□□□ -0.83
NEO1-208ENST00000560328 CD4P01730 458 aa9.88□□□□□ -0.83
NEO1-208ENST00000560328 GRIK1P39086 918 aa9.88□□□□□ -0.83
NEO1-208ENST00000560328 EIF3EP60228 445 aaKnown RBP9.88□□□□□ -0.83
NEO1-208ENST00000560328 EPC2Q52LR7 807 aa9.88□□□□□ -0.83
NEO1-208ENST00000560328 PDCD6IPQ8WUM4 868 aaKnown RBP9.88□□□□□ -0.83
NEO1-208ENST00000560328 SEMA6BQ9H3T3 888 aa9.88□□□□□ -0.83
NEO1-208ENST00000560328 G3BP2Q9UN86 482 aaKnown RBP9.88□□□□□ -0.83
NEO1-208ENST00000560328 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.88□□□□□ -0.83
NEO1-208ENST00000560328 MYOM1P52179 1685 aa9.88□□□□□ -0.83
NEO1-208ENST00000560328 RRN3P2A6NIE6 340 aa9.88□□□□□ -0.83
NEO1-208ENST00000560328 TMEM253P0C7T8 217 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms