RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 FUT10Q6P4F1 479 aa12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 ALKAL1Q6UXT8 129 aa12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 ZPBP2Q6X784 338 aa12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 ADHFE1Q8IWW8 467 aa12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 TMEM130Q8N3G9 435 aa12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 PDILTQ8N807 584 aa12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 C12orf76Q8N812 135 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 CHAMP1Q96JM3 812 aa12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 ZMAT2Q96NC0 199 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 PPP1R10Q96QC0 940 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 CCDC94Q9BW85 323 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 IKZF4Q9H2S9 585 aa12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 GOLGA2P5Q9HBQ8 144 aa12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 MRPL17Q9NRX2 175 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 ADAM28Q9UKQ2 775 aa12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 TBX20Q9UMR3 447 aa12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 FAM50BQ9Y247 325 aa12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 SMIM28A0A1B0GU29 152 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 FSD2A1L4K1 749 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 VWA8A3KMH1 1905 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 C19orf67A6NJJ6 358 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 TADA2AO75478 443 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 YEATS4O95619 227 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 URODP06132 367 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 WEE2P0C1S8 567 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 TXLNAP40222 546 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 STAT6P42226 847 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 GLUD2P49448 558 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 DSG1Q02413 1049 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 DNM1Q05193 864 aaKnown RBP12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 NOLC1Q14978 699 aaKnown RBP eCLIP12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 XKR4Q5GH76 650 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 ZBTB41Q5SVQ8 909 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 SLC39A4Q6P5W5 647 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 SHC4Q6S5L8 630 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 SV2BQ7L1I2 683 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 APBB1IPQ7Z5R6 666 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 SFR1Q86XK3 245 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 TMEM87AQ8NBN3 555 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 SUSD6Q92537 303 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 DDX12PQ92771 950 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 STAMQ92783 540 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 CASP10Q92851 521 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 DNAJC19Q96DA6 116 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 BICD1Q96G01 975 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 SNX27Q96L92 541 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 EPHX3Q9H6B9 360 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 CHST7Q9NS84 486 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 PRKAG3Q9UGI9 489 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 KCNG1Q9UIX4 513 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 ZDHHC9Q9Y397 364 aa12.75□□□□□ -0.37
RABGGTA-216ENST00000560243 PDCD11Q14690 1871 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 TISP43B9A030 160 aa12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 TEX28O15482 410 aa12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 CLDN3O15551 220 aa12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 PPP6R2O75170 966 aa12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 SRGAP2BP0DMP2 458 aa12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 MYBP10242 640 aa12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 RPL17P18621 184 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 KLRC2P26717 231 aa12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 TNFSF9P41273 254 aa12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 CLCN4P51793 760 aa12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 CLCNKBP51801 687 aa12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 YARSP54577 528 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 MCL1Q07820 350 aa12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 SLC10A6Q3KNW5 377 aa12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 RTP2Q5QGT7 225 aa12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 RARS2Q5T160 578 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 AXDND1Q5T1B0 1012 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 PRSS55Q6UWB4 352 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 CD300LGQ6UXG3 332 aa12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 CCDC73Q6ZRK6 1079 aa12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 C3orf58Q8NDZ4 430 aa12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 RIN2Q8WYP3 895 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 KCNN1Q92952 543 aa12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 C18orf25Q96B23 403 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 ACAP3Q96P50 834 aa12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 EMILIN2Q9BXX0 1053 aa12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 TOPORSQ9NS56 1045 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 TBC1D7Q9P0N9 293 aa12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 STK39Q9UEW8 545 aa12.74□□□□□ -0.37
RABGGTA-216ENST00000560243 SF3B1O75533 1304 aaKnown RBP eCLIP12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 ANKRD63C9JTQ0 380 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 H0YCG3 227 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 I3L4J1 428 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 HNRNPDLO14979 420 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 FAM189A1O60320 539 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 CUTAO60888 179 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 PIGRP01833 764 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 SPATA31D3P0C874 917 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 CXCL8P10145 99 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 KCNE1P15382 129 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 HOXB8P17481 243 aaPredicted RBP12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 MATR3P43243 847 aaKnown RBP eCLIP12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 LIG4P49917 911 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 GTF2BQ00403 316 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 SPAG1Q07617 926 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 KCNA1Q09470 495 aa12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 CBX2Q14781 532 aaPredicted RBP12.73□□□□□ -0.37
RABGGTA-216ENST00000560243 E2F4Q16254 413 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms