RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 LTA4HP09960 611 aaKnown RBP4.91□□□□□ -1.62
LRRC28-218ENST00000560236 TYRP1P17643 537 aa4.91□□□□□ -1.62
LRRC28-218ENST00000560236 POU3F2P20265 443 aaPredicted RBP4.91□□□□□ -1.62
LRRC28-218ENST00000560236 LSP1P33241 339 aa4.91□□□□□ -1.62
LRRC28-218ENST00000560236 PHC1P78364 1004 aa4.91□□□□□ -1.62
LRRC28-218ENST00000560236 SART3Q15020 963 aaKnown RBP4.91□□□□□ -1.62
LRRC28-218ENST00000560236 DDB1Q16531 1140 aa4.91□□□□□ -1.62
LRRC28-218ENST00000560236 PRR16Q569H4 304 aa4.91□□□□□ -1.62
LRRC28-218ENST00000560236 ANKS6Q68DC2 871 aa4.91□□□□□ -1.62
LRRC28-218ENST00000560236 FBXO42Q6P3S6 717 aa4.91□□□□□ -1.62
LRRC28-218ENST00000560236 RSAD2Q8WXG1 361 aa4.91□□□□□ -1.62
LRRC28-218ENST00000560236 TFAP2CQ92754 450 aa4.91□□□□□ -1.62
LRRC28-218ENST00000560236 MTFR1LQ9H019 292 aa4.91□□□□□ -1.62
LRRC28-218ENST00000560236 PRDM13Q9H4Q3 707 aa4.91□□□□□ -1.62
LRRC28-218ENST00000560236 RSAD1Q9HA92 442 aa4.91□□□□□ -1.62
LRRC28-218ENST00000560236 EVLQ9UI08 416 aaPredicted RBP4.91□□□□□ -1.62
LRRC28-218ENST00000560236 PLA2R1Q13018 1463 aa4.91□□□□□ -1.62
LRRC28-218ENST00000560236 ZNF335Q9H4Z2 1342 aaPredicted RBP4.91□□□□□ -1.62
LRRC28-218ENST00000560236 SETD1AO15047 1707 aaKnown RBP4.9□□□□□ -1.62
LRRC28-218ENST00000560236 TBKBP1A7MCY6 615 aa4.9□□□□□ -1.63
LRRC28-218ENST00000560236 ITGA10O75578 1167 aa4.9□□□□□ -1.63
LRRC28-218ENST00000560236 CXCR5P32302 372 aa4.9□□□□□ -1.63
LRRC28-218ENST00000560236 BLOC1S1P78537 153 aa4.9□□□□□ -1.63
LRRC28-218ENST00000560236 OCRLQ01968 901 aa4.9□□□□□ -1.63
LRRC28-218ENST00000560236 FOXI1Q12951 378 aa4.9□□□□□ -1.63
LRRC28-218ENST00000560236 TP53BP2Q13625 1128 aa4.9□□□□□ -1.63
LRRC28-218ENST00000560236 ABHD17BQ5VST6 288 aa4.9□□□□□ -1.63
LRRC28-218ENST00000560236 CNNM4Q6P4Q7 775 aa4.9□□□□□ -1.63
LRRC28-218ENST00000560236 LRRTM3Q86VH5 581 aa4.9□□□□□ -1.63
LRRC28-218ENST00000560236 RNF169Q8NCN4 708 aa4.9□□□□□ -1.63
LRRC28-218ENST00000560236 SMC1BQ8NDV3 1235 aa4.9□□□□□ -1.63
LRRC28-218ENST00000560236 NAF1Q96HR8 494 aaKnown RBP4.9□□□□□ -1.63
LRRC28-218ENST00000560236 GPR101Q96P66 508 aaPredicted RBP4.9□□□□□ -1.63
LRRC28-218ENST00000560236 ANO3Q9BYT9 981 aa4.9□□□□□ -1.63
LRRC28-218ENST00000560236 WNT8AQ9H1J5 351 aa4.9□□□□□ -1.63
LRRC28-218ENST00000560236 MS4A5Q9H3V2 200 aa4.9□□□□□ -1.63
LRRC28-218ENST00000560236 ZSWIM4Q9H7M6 989 aa4.9□□□□□ -1.63
LRRC28-218ENST00000560236 RGS17Q9UGC6 210 aaPredicted RBP4.9□□□□□ -1.63
LRRC28-218ENST00000560236 PRSS50Q9UI38 385 aa4.9□□□□□ -1.63
LRRC28-218ENST00000560236 KCNG1Q9UIX4 513 aa4.9□□□□□ -1.63
LRRC28-218ENST00000560236 TMPRSS11EQ9UL52 423 aa4.9□□□□□ -1.63
LRRC28-218ENST00000560236 USP15Q9Y4E8 981 aaPredicted RBP4.9□□□□□ -1.63
LRRC28-218ENST00000560236 PPP2R3BQ9Y5P8 575 aa4.9□□□□□ -1.63
LRRC28-218ENST00000560236 REREQ9P2R6 1566 aa4.9□□□□□ -1.63
LRRC28-218ENST00000560236 ATP10BO94823 1461 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 AGLP35573 1532 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 FAM83GA6ND36 823 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 PLA2G5P39877 138 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 MXRA7P84157 204 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 MEF2AQ02078 507 aaPredicted RBP4.89□□□□□ -1.63
LRRC28-218ENST00000560236 TERF2Q15554 542 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 TCEA2Q15560 299 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 C21orf62-AS1Q17RA5 79 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 BMT2Q1RMZ1 405 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 C19orf54Q5BKX5 351 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 FRMD7Q6ZUT3 714 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 LYSMD2Q8IV50 215 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 SIMC1Q8NDZ2 872 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 OR14C36Q8NHC7 312 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 MDM1Q8TC05 714 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 NELL1Q92832 810 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 ADAM2Q99965 735 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.89□□□□□ -1.63
LRRC28-218ENST00000560236 SPTLC3Q9NUV7 552 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 RNF181Q9P0P0 153 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 MAP3K2Q9Y2U5 619 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 CD2APQ9Y5K6 639 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 FPGT-TNNI3KV9GXZ4 949 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 NPATQ14207 1427 aa4.89□□□□□ -1.63
LRRC28-218ENST00000560236 MARCH11A6NNE9 402 aa4.88□□□□□ -1.63
LRRC28-218ENST00000560236 KDM1AO60341 852 aa4.88□□□□□ -1.63
LRRC28-218ENST00000560236 RAB11FIP3O75154 756 aa4.88□□□□□ -1.63
LRRC28-218ENST00000560236 SPDEFO95238 335 aa4.88□□□□□ -1.63
LRRC28-218ENST00000560236 ESRRBO95718 433 aa4.88□□□□□ -1.63
LRRC28-218ENST00000560236 GASTP01350 101 aa4.88□□□□□ -1.63
LRRC28-218ENST00000560236 PTH2RP49190 550 aa4.88□□□□□ -1.63
LRRC28-218ENST00000560236 SCNN1BP51168 640 aa4.88□□□□□ -1.63
LRRC28-218ENST00000560236 MANFP55145 182 aaKnown RBP4.88□□□□□ -1.63
LRRC28-218ENST00000560236 RESTQ13127 1097 aa4.88□□□□□ -1.63
LRRC28-218ENST00000560236 FAM102AQ5T9C2 384 aaPredicted RBP4.88□□□□□ -1.63
LRRC28-218ENST00000560236 ABHD15Q6UXT9 468 aa4.88□□□□□ -1.63
LRRC28-218ENST00000560236 PDZD4Q76G19 769 aaPredicted RBP4.88□□□□□ -1.63
LRRC28-218ENST00000560236 ZFP28Q8NHY6 868 aa4.88□□□□□ -1.63
LRRC28-218ENST00000560236 SNX33Q8WV41 574 aa4.88□□□□□ -1.63
LRRC28-218ENST00000560236 ASB10Q8WXI3 467 aa4.88□□□□□ -1.63
LRRC28-218ENST00000560236 GPRC5DQ9NZD1 345 aa4.88□□□□□ -1.63
LRRC28-218ENST00000560236 CNTLNQ9NXG0 1405 aa4.88□□□□□ -1.63
LRRC28-218ENST00000560236 TCOF1Q13428 1488 aaKnown RBP4.88□□□□□ -1.63
LRRC28-218ENST00000560236 RAPGEF2Q9Y4G8 1499 aa4.88□□□□□ -1.63
LRRC28-218ENST00000560236 TMEM127O75204 238 aa4.87□□□□□ -1.63
LRRC28-218ENST00000560236 EGR2P11161 476 aaPredicted RBP4.87□□□□□ -1.63
LRRC28-218ENST00000560236 ITGAMP11215 1152 aa4.87□□□□□ -1.63
LRRC28-218ENST00000560236 CDK4P11802 303 aa4.87□□□□□ -1.63
LRRC28-218ENST00000560236 ELLP55199 621 aaPredicted RBP4.87□□□□□ -1.63
LRRC28-218ENST00000560236 IL2P60568 153 aa4.87□□□□□ -1.63
LRRC28-218ENST00000560236 MPP3Q13368 585 aa4.87□□□□□ -1.63
LRRC28-218ENST00000560236 TRIM25Q14258 630 aaKnown RBP4.87□□□□□ -1.63
LRRC28-218ENST00000560236 PCBP1Q15365 356 aaKnown RBP eCLIP4.87□□□□□ -1.63
LRRC28-218ENST00000560236 ARMC6Q6NXE6 501 aa4.87□□□□□ -1.63
LRRC28-218ENST00000560236 C11orf74Q86VG3 221 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms