RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 IBSPP21815 317 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 AKAP5P24588 427 aa13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 ADSSP30520 456 aa13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 RPL9P32969 192 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 PBX2P40425 430 aa13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 AP3M2P53677 418 aa13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 DSC1Q08554 894 aa13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 KCNA1Q09470 495 aa13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 MORC3Q14149 939 aa13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 HPS3Q969F9 1004 aa13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 SNX27Q96L92 541 aa13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 FBXL18Q96ME1 805 aa13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 COLEC11Q9BWP8 271 aa13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 RNF39Q9H2S5 420 aa13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 KCTD10Q9H3F6 313 aa13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 SPG21Q9NZD8 308 aa13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 HSPBP1Q9NZL4 362 aa13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 PCDH10Q9P2E7 1040 aa13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 UBQLN1Q9UMX0 589 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 INPP5FQ9Y2H2 1132 aa13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 MRPL42Q9Y6G3 142 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-215ENST00000560207 SMIM28A0A1B0GU29 152 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 ARHGEF37A1IGU5 675 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 FSD2A1L4K1 749 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 H3BNC9 293 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 EXOC3O60645 756 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 HARSP12081 509 aaKnown RBP13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 HOXD13P35453 343 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 PLCB3Q01970 1234 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 ELAVL2Q12926 359 aaKnown RBP13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 CAMK4Q16566 473 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 PTPROQ16827 1216 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 KLHL40Q2TBA0 621 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 SLC10A6Q3KNW5 377 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 PAN2Q504Q3 1202 aaKnown RBP13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 EPC2Q52LR7 807 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 CCDC183Q5T5S1 534 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 CENPPQ6IPU0 288 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 KCNT2Q6UVM3 1135 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 TMCO2Q7Z6W1 182 aaPredicted RBP13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 BRSK2Q8IWQ3 736 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 NELFCDQ8IXH7 590 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 GPR65Q8IYL9 337 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 ADSSL1Q8N142 457 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 GSTCDQ8NEC7 633 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 FBXO22Q8NEZ5 403 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 TMEM169Q96HH4 297 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 MKNK1Q9BUB5 465 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 FGFBP2Q9BYJ0 223 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 CWH43Q9H720 699 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 MAN1B1Q9UKM7 699 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 SSX2IPQ9Y2D8 614 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 USP20Q9Y2K6 914 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 FAN1Q9Y2M0 1017 aa13.1□□□□□ -0.31
RABGGTA-215ENST00000560207 TMEM189-UBE2V1I3L0A0 370 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 CETN3O15182 167 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 TRAPPC3O43617 180 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 MYOGP15173 224 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 POU3F3P20264 500 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 CCNE1P24864 410 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 CTNNB1P35222 781 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 PRCPP42785 496 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 FXR1P51114 621 aaKnown RBP eCLIP13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 SCNN1GP51170 649 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 BCAR1P56945 870 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 OSTNP61366 133 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 FKBP3Q00688 224 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 ENOX2Q16206 610 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 SNRNP35Q16560 246 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 RBM43Q6ZSC3 357 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 COLGALT2Q8IYK4 626 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 CEP120Q8N960 986 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 COLGALT1Q8NBJ5 622 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 GLIS3Q8NEA6 775 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 BEST2Q8NFU1 509 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 GPT2Q8TD30 523 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 PPP2R3CQ969Q6 453 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 ZFP42Q96MM3 310 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 PPP1R10Q96QC0 940 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 GAS2L1Q99501 681 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 CBWD1Q9BRT8 395 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 FAM213AQ9BRX8 229 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 HAPLN2Q9GZV7 340 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 SEMA6BQ9H3T3 888 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 NRDE2Q9H7Z3 1164 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 DMAC2Q9NW81 257 aa13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 RBAKQ9NYW8 714 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 R3HCC1Q9Y3T6 440 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-215ENST00000560207 LCHNA4D1U4 455 aa13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 MEIS3P2A8K0S8 358 aa13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 SOX1O00570 391 aaPredicted RBP13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 ZC3H11AO75152 810 aaKnown RBP eCLIP13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 GNA14O95837 355 aa13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 POMCP01189 267 aa13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 NR3C1P04150 777 aa13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 GALTP07902 379 aa13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 CXCL8P10145 99 aa13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 NR2F2P24468 414 aa13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 ERCC5P28715 1186 aaPredicted RBP13.08□□□□□ -0.32
RABGGTA-215ENST00000560207 PSMC2P35998 433 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms