RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 CCDC51Q96ER9 411 aa10.21□□□□□ -0.77
HERC1-206ENST00000559996 FAM84AQ96KN4 292 aa10.21□□□□□ -0.77
HERC1-206ENST00000559996 CNOT6LQ96LI5 555 aaKnown RBP10.21□□□□□ -0.77
HERC1-206ENST00000559996 POP1Q99575 1024 aaKnown RBP10.21□□□□□ -0.77
HERC1-206ENST00000559996 TCHPQ9BT92 498 aa10.21□□□□□ -0.77
HERC1-206ENST00000559996 NXF3Q9H4D5 531 aaKnown RBP10.21□□□□□ -0.77
HERC1-206ENST00000559996 FAM105AQ9NUU6 356 aa10.21□□□□□ -0.77
HERC1-206ENST00000559996 MIOSQ9NXC5 875 aa10.21□□□□□ -0.77
HERC1-206ENST00000559996 SNTG2Q9NY99 539 aa10.21□□□□□ -0.77
HERC1-206ENST00000559996 PCDHB2Q9Y5E7 798 aa10.21□□□□□ -0.77
HERC1-206ENST00000559996 TRIP11Q15643 1979 aa10.21□□□□□ -0.78
HERC1-206ENST00000559996 ZNF233A6NK53 670 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 LRRIQ3A6PVS8 624 aaPredicted RBP10.2□□□□□ -0.78
HERC1-206ENST00000559996 LACTBL1A8MY62 500 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 TEX33O43247 280 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 LRRN2O75325 713 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 CLTAP09496 248 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 HARSP12081 509 aaKnown RBP10.2□□□□□ -0.78
HERC1-206ENST00000559996 RAG1P15918 1043 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 AKAP5P24588 427 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 EEF1GP26641 437 aaKnown RBP10.2□□□□□ -0.78
HERC1-206ENST00000559996 RFC2P35250 354 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 TTC3P53804 2025 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 OSTNP61366 133 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 FANCCQ00597 558 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 ENPEPQ07075 957 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 PPP3CAQ08209 521 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 PTPRJQ12913 1337 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 LTBP2Q14767 1821 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 NR1I3Q14994 352 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 PSMD6Q15008 389 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 NAB2Q15742 525 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 ZBTB6Q15916 424 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 DCAF4L1Q3SXM0 396 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 C15orf39Q6ZRI6 1047 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 FAM43BQ6ZT52 329 aaPredicted RBP10.2□□□□□ -0.78
HERC1-206ENST00000559996 DEFB128Q7Z7B8 93 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 ECHDC2Q86YB7 292 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 BRSK2Q8IWQ3 736 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 FAM186BQ8IYM0 893 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 C7orf61Q8IZ16 206 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 BADQ92934 168 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 ZMAT2Q96NC0 199 aaKnown RBP10.2□□□□□ -0.78
HERC1-206ENST00000559996 KIAA1586Q9HCI6 787 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 PDE11AQ9HCR9 933 aa10.2□□□□□ -0.78
HERC1-206ENST00000559996 PRDM5Q9NQX1 630 aaPredicted RBP10.2□□□□□ -0.78
HERC1-206ENST00000559996 A0A1B0GTH6 734 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 INPPL1O15357 1258 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 FGFR1OPO95684 399 aaKnown RBP10.19□□□□□ -0.78
HERC1-206ENST00000559996 GNA14O95837 355 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 C4BPAP04003 597 aaKnown RBP10.19□□□□□ -0.78
HERC1-206ENST00000559996 CXCL8P10145 99 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 ACRP10323 421 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 ZSCAN20P17040 1043 aaPredicted RBP10.19□□□□□ -0.78
HERC1-206ENST00000559996 SYN1P17600 705 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 PBX1P40424 430 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 VAMP7P51809 220 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 COPB1P53618 953 aaKnown RBP10.19□□□□□ -0.78
HERC1-206ENST00000559996 LSM11P83369 360 aaKnown RBP eCLIP10.19□□□□□ -0.78
HERC1-206ENST00000559996 NCBP1Q09161 790 aaKnown RBP10.19□□□□□ -0.78
HERC1-206ENST00000559996 KCNMA1Q12791 1236 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 BFSP1Q12934 665 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 TPD52L1Q16890 204 aaPredicted RBP10.19□□□□□ -0.78
HERC1-206ENST00000559996 TWF2Q6IBS0 349 aaKnown RBP10.19□□□□□ -0.78
HERC1-206ENST00000559996 CNKSR3Q6P9H4 555 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 SARM1Q6SZW1 724 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.19□□□□□ -0.78
HERC1-206ENST00000559996 SLC24A5Q71RS6 500 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 EFCAB13Q8IY85 973 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 OR5B17Q8NGF7 314 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 LMO3Q8TAP4 145 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 SEPT8Q92599 483 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 APBB2Q92870 758 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 LPPQ93052 612 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 ACAP3Q96P50 834 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 ADPGKQ9BRR6 497 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 TUBGCP2Q9BSJ2 902 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 FTHL17Q9BXU8 183 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 GRPEL1Q9HAV7 217 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 METTL14Q9HCE5 456 aaKnown RBP10.19□□□□□ -0.78
HERC1-206ENST00000559996 IL23AQ9NPF7 189 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 RTN4Q9NQC3 1192 aaKnown RBP10.19□□□□□ -0.78
HERC1-206ENST00000559996 TOPORSQ9NS56 1045 aaPredicted RBP10.19□□□□□ -0.78
HERC1-206ENST00000559996 FRMD4BQ9Y2L6 1034 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 PCDHGA4Q9Y5G9 962 aa10.19□□□□□ -0.78
HERC1-206ENST00000559996 MICAL3Q7RTP6 2002 aa10.18□□□□□ -0.78
HERC1-206ENST00000559996 PTGESO14684 152 aa10.18□□□□□ -0.78
HERC1-206ENST00000559996 PMM2O15305 246 aa10.18□□□□□ -0.78
HERC1-206ENST00000559996 EVI5O60447 810 aa10.18□□□□□ -0.78
HERC1-206ENST00000559996 OFD1O75665 1012 aa10.18□□□□□ -0.78
HERC1-206ENST00000559996 RECQL4O94761 1208 aa10.18□□□□□ -0.78
HERC1-206ENST00000559996 EOMESO95936 686 aa10.18□□□□□ -0.78
HERC1-206ENST00000559996 TRIM49P0CI25 452 aa10.18□□□□□ -0.78
HERC1-206ENST00000559996 TRIM49CP0CI26 452 aa10.18□□□□□ -0.78
HERC1-206ENST00000559996 EPB41P11171 864 aaKnown RBP10.18□□□□□ -0.78
HERC1-206ENST00000559996 IGFBP6P24592 240 aaPredicted RBP10.18□□□□□ -0.78
HERC1-206ENST00000559996 MATR3P43243 847 aaKnown RBP eCLIP10.18□□□□□ -0.78
HERC1-206ENST00000559996 RGS19P49795 217 aa10.18□□□□□ -0.78
HERC1-206ENST00000559996 KCNH2Q12809 1159 aa10.18□□□□□ -0.78
HERC1-206ENST00000559996 CBWD6Q4V339 395 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms