RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 DHX33Q9H6R0 707 aaKnown RBP19.23■□□□□ 0.67
SNX1-208ENST00000559844 SETD4Q9NVD3 440 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 NAGPAQ9UK23 515 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 INTUQ9ULD6 942 aa19.23■□□□□ 0.67
SNX1-208ENST00000559844 ZBTB42B2RXF5 422 aa19.22■□□□□ 0.67
SNX1-208ENST00000559844 EVI5O60447 810 aa19.22■□□□□ 0.67
SNX1-208ENST00000559844 CAPN2P17655 700 aa19.22■□□□□ 0.67
SNX1-208ENST00000559844 MXI1P50539 228 aa19.22■□□□□ 0.67
SNX1-208ENST00000559844 SOX10P56693 466 aa19.22■□□□□ 0.67
SNX1-208ENST00000559844 ALKBH5Q6P6C2 394 aaKnown RBP19.22■□□□□ 0.67
SNX1-208ENST00000559844 LMBR1Q8WVP7 490 aa19.22■□□□□ 0.67
SNX1-208ENST00000559844 POMGNT1Q8WZA1 660 aa19.22■□□□□ 0.67
SNX1-208ENST00000559844 SALL4Q9UJQ4 1053 aa19.22■□□□□ 0.67
SNX1-208ENST00000559844 NENFQ9UMX5 172 aa19.22■□□□□ 0.67
SNX1-208ENST00000559844 NRCAMQ92823 1304 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 A0A0U1RQG5 324 aaPredicted RBP19.21■□□□□ 0.67
SNX1-208ENST00000559844 GOLGA8IPA6NC78 632 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 GOLGA8JA6NMD2 632 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 KIAA0391O15091 583 aaKnown RBP19.21■□□□□ 0.67
SNX1-208ENST00000559844 ADRB2P07550 413 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 ZSCAN20P17040 1043 aaPredicted RBP19.21■□□□□ 0.67
SNX1-208ENST00000559844 KLRC1P26715 233 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 GTF2H1P32780 548 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 GCLMP48507 274 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 STRN3Q13033 797 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 BRD3Q15059 726 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 TARBP2Q15633 366 aaKnown RBP19.21■□□□□ 0.67
SNX1-208ENST00000559844 ZNF484Q5JVG2 852 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 C1orf220Q5T0J3 134 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 NFRKBQ6P4R8 1299 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 GPD1LQ8N335 351 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 CAGE1Q8TC20 777 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 BICD1Q96G01 975 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 PAWRQ96IZ0 340 aaKnown RBP19.21■□□□□ 0.67
SNX1-208ENST00000559844 KIAA1586Q9HCI6 787 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 COL1A2P08123 1366 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 ADGRA3Q8IWK6 1321 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 HNRNPDLO14979 420 aaKnown RBP19.21■□□□□ 0.67
SNX1-208ENST00000559844 BUB1O43683 1085 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 SRGAP2O75044 1071 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 NAMPTP43490 491 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 PHLDB3Q6NSJ2 640 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 CBWD2Q8IUF1 395 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 TNS4Q8IZW8 715 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 MFSD14AQ96MC6 490 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 GTF2IRD1Q9UHL9 959 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 PCDHGC5Q9Y5F6 944 aa19.21■□□□□ 0.67
SNX1-208ENST00000559844 C17orf102A2RUQ5 167 aa19.2■□□□□ 0.66
SNX1-208ENST00000559844 COL6A1P12109 1028 aa19.2■□□□□ 0.66
SNX1-208ENST00000559844 ARL2P36404 184 aa19.2■□□□□ 0.66
SNX1-208ENST00000559844 HIC1Q14526 733 aa19.2■□□□□ 0.66
SNX1-208ENST00000559844 SLC39A4Q6P5W5 647 aa19.2■□□□□ 0.66
SNX1-208ENST00000559844 PLEKHO2Q8TD55 490 aa19.2■□□□□ 0.66
SNX1-208ENST00000559844 PARD3BQ8TEW8 1205 aa19.2■□□□□ 0.66
SNX1-208ENST00000559844 ZBTB10Q96DT7 871 aa19.2■□□□□ 0.66
SNX1-208ENST00000559844 SAAL1Q96ER3 474 aa19.2■□□□□ 0.66
SNX1-208ENST00000559844 GPR88Q9GZN0 384 aa19.2■□□□□ 0.66
SNX1-208ENST00000559844 TMEM117Q9H0C3 514 aa19.2■□□□□ 0.66
SNX1-208ENST00000559844 EPC1Q9H2F5 836 aa19.2■□□□□ 0.66
SNX1-208ENST00000559844 OGFRQ9NZT2 677 aa19.2■□□□□ 0.66
SNX1-208ENST00000559844 RRN3P2A6NIE6 340 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 ATP8B1O43520 1251 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 H2AFZP0C0S5 128 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 ATN1P54259 1190 aaPredicted RBP19.19■□□□□ 0.66
SNX1-208ENST00000559844 KRT39Q6A163 491 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 H2AFVQ71UI9 128 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 EXOC8Q8IYI6 725 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 ZSWIM2Q8NEG5 633 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 DEPTORQ8TB45 409 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 CAPZA3Q96KX2 299 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 CEP89Q96ST8 783 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 MMS19Q96T76 1030 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 PACSIN1Q9BY11 444 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 C11orf49Q9H6J7 331 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 ANKZF1Q9H8Y5 726 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 TMEM8AQ9HCN3 771 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 A0A0A6YYK5 440 aaPredicted RBP19.19■□□□□ 0.66
SNX1-208ENST00000559844 CCDC151A5D8V7 595 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 CCDC85CA6NKD9 419 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 DDX3XO00571 662 aaKnown RBP eCLIP19.19■□□□□ 0.66
SNX1-208ENST00000559844 LIG4P49917 911 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 ZNF200P98182 395 aaPredicted RBP19.19■□□□□ 0.66
SNX1-208ENST00000559844 CYP24A1Q07973 514 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 ARHGAP44Q17R89 818 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 MARCH8Q5T0T0 291 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 GDF6Q6KF10 455 aaPredicted RBP19.19■□□□□ 0.66
SNX1-208ENST00000559844 NECAB2Q7Z6G3 386 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 SESTD1Q86VW0 696 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 SLC30A5Q8TAD4 765 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 OSBPL9Q96SU4 736 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 UBE2TQ9NPD8 197 aaPredicted RBP19.19■□□□□ 0.66
SNX1-208ENST00000559844 RAB21Q9UL25 225 aa19.19■□□□□ 0.66
SNX1-208ENST00000559844 MKI67P46013 3256 aaKnown RBP19.18■□□□□ 0.66
SNX1-208ENST00000559844 ARVCFO00192 962 aa19.18■□□□□ 0.66
SNX1-208ENST00000559844 PALMO75781 387 aa19.18■□□□□ 0.66
SNX1-208ENST00000559844 C22orf31O95567 290 aa19.18■□□□□ 0.66
SNX1-208ENST00000559844 PNMA6AP0CW24 399 aaPredicted RBP19.18■□□□□ 0.66
SNX1-208ENST00000559844 GNAT1P11488 350 aa19.18■□□□□ 0.66
SNX1-208ENST00000559844 GLRA2P23416 452 aa19.18■□□□□ 0.66
SNX1-208ENST00000559844 HOXC8P31273 242 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms