RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 TULP1O00294 542 aaPredicted RBP8.96□□□□□ -0.98
SNX1-207ENST00000559401 KIF4AO95239 1232 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 YEATS4O95619 227 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 ADH1AP07327 375 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 CNPP09543 421 aaKnown RBP8.96□□□□□ -0.98
SNX1-207ENST00000559401 MYBP10242 640 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 HOXB8P17481 243 aaPredicted RBP8.96□□□□□ -0.98
SNX1-207ENST00000559401 SP100P23497 879 aaPredicted RBP8.96□□□□□ -0.98
SNX1-207ENST00000559401 NMT1P30419 496 aaKnown RBP8.96□□□□□ -0.98
SNX1-207ENST00000559401 ZP2Q05996 745 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 KCNC3Q14003 757 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 CBX2Q14781 532 aaPredicted RBP8.96□□□□□ -0.98
SNX1-207ENST00000559401 USP41Q3LFD5 358 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 ELMSAN1Q6PJG2 1045 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 ZPBP2Q6X784 338 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 TAS1R1Q7RTX1 841 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 PPFIBP1Q86W92 1011 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 SFR1Q86XK3 245 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 C12orf76Q8N812 135 aaPredicted RBP8.96□□□□□ -0.98
SNX1-207ENST00000559401 LINC00301Q8NCQ3 95 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 RIN2Q8WYP3 895 aaPredicted RBP8.96□□□□□ -0.98
SNX1-207ENST00000559401 DDX12PQ92771 950 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 RPGRIP1Q96KN7 1286 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 KLHL5Q96PQ7 755 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 GPR62Q9BZJ7 368 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 GOLGA2P5Q9HBQ8 144 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 PTPRHQ9HD43 1115 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 CD320Q9NPF0 282 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 TSHZ2Q9NRE2 1034 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 TBX20Q9UMR3 447 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 IRAK3Q9Y616 596 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 NCOR1O75376 2440 aa8.96□□□□□ -0.98
SNX1-207ENST00000559401 BDP1A6H8Y1 2624 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 SMIM28A0A1B0GU29 152 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 MYMKA6NI61 221 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 TEX28O15482 410 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 CUTAO60888 179 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 PPP6R2O75170 966 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 B3GAT3O94766 335 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 WEE2P0C1S8 567 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 RPL17P18621 184 aaKnown RBP8.95□□□□□ -0.98
SNX1-207ENST00000559401 PROZP22891 400 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 ABCD1P33897 745 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 ME1P48163 572 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 CLCNKBP51801 687 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 ZNF131P52739 623 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 PKP1Q13835 747 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 ZC2HC1CQ53FD0 456 aaPredicted RBP8.95□□□□□ -0.98
SNX1-207ENST00000559401 FAM171A1Q5VUB5 890 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 SYCE2Q6PIF2 218 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 TMEM184AQ6ZMB5 413 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 PALB2Q86YC2 1186 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 STAMQ92783 540 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 FAM212AQ96EL1 285 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 SNX27Q96L92 541 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 FBXL18Q96ME1 805 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 RIPOR3Q96MK2 946 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 UROC1Q96N76 676 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 PPP1R10Q96QC0 940 aaKnown RBP8.95□□□□□ -0.98
SNX1-207ENST00000559401 PHF7Q9BWX1 381 aaPredicted RBP8.95□□□□□ -0.98
SNX1-207ENST00000559401 MRPL44Q9H9J2 332 aaKnown RBP8.95□□□□□ -0.98
SNX1-207ENST00000559401 MAN1C1Q9NR34 630 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 SLC38A7Q9NVC3 462 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 TBC1D7Q9P0N9 293 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 CDH22Q9UJ99 828 aa8.95□□□□□ -0.98
SNX1-207ENST00000559401 VWA8A3KMH1 1905 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 A0A087X0B3 334 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 ABLIM1O14639 778 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 GCNT3O95395 438 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 BRD1O95696 1058 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 GLUD1P00367 558 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 SPATA31D3P0C874 917 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 CXCL8P10145 99 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 GAP43P17677 238 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 SCP2P22307 547 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 MTHFRP42898 656 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 CLCN4P51793 760 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 DSG1Q02413 1049 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 CREMQ03060 361 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 ITIH3Q06033 890 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 PPP2R3AQ06190 1150 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 SOX4Q06945 474 aaPredicted RBP8.94□□□□□ -0.98
SNX1-207ENST00000559401 SPAG1Q07617 926 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 MCL1Q07820 350 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 ELAVL2Q12926 359 aaKnown RBP8.94□□□□□ -0.98
SNX1-207ENST00000559401 NAB2Q15742 525 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 PSMD5Q16401 504 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 HERC4Q5GLZ8 1057 aaPredicted RBP8.94□□□□□ -0.98
SNX1-207ENST00000559401 RTP2Q5QGT7 225 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 KIAA0319Q5VV43 1072 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 KANK3Q6NY19 840 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 PRSS55Q6UWB4 352 aaPredicted RBP8.94□□□□□ -0.98
SNX1-207ENST00000559401 TMC5Q6UXY8 1006 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 SPATA31D4Q6ZUB0 917 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 RNF168Q8IYW5 571 aaPredicted RBP8.94□□□□□ -0.98
SNX1-207ENST00000559401 KCNG4Q8TDN1 519 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 SLC22A17Q8WUG5 538 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 KHSRPQ92945 711 aaKnown RBP eCLIP8.94□□□□□ -0.982e-6■■□□□ 11.4
SNX1-207ENST00000559401 DHX58Q96C10 678 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 TTPALQ9BTX7 342 aa8.94□□□□□ -0.98
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