RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 BMP8AQ7Z5Y6 402 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 CATSPER3Q86XQ3 398 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 COLGALT2Q8IYK4 626 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 FBXO18Q8NFZ0 1043 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 DEPTORQ8TB45 409 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 SLC22A17Q8WUG5 538 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 FBXL18Q96ME1 805 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 USB1Q9BQ65 265 aaKnown RBP8.91□□□□□ -0.98
TRAF3-205ENST00000558700 GPRC5CQ9NQ84 441 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 MARCH5Q9NX47 278 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 DPP7Q9UHL4 492 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 HES2Q9Y543 173 aa8.91□□□□□ -0.98
TRAF3-205ENST00000558700 C2CD4DB7Z1M9 353 aa8.9□□□□□ -0.98
TRAF3-205ENST00000558700 ST18O60284 1047 aa8.9□□□□□ -0.98
TRAF3-205ENST00000558700 PRKCBP05771 671 aa8.9□□□□□ -0.98
TRAF3-205ENST00000558700 KLRC2P26717 231 aa8.9□□□□□ -0.98
TRAF3-205ENST00000558700 CCT6AP40227 531 aaKnown RBP8.9□□□□□ -0.98
TRAF3-205ENST00000558700 CLCN4P51793 760 aa8.9□□□□□ -0.98
TRAF3-205ENST00000558700 AFF1P51825 1210 aaKnown RBP8.9□□□□□ -0.98
TRAF3-205ENST00000558700 CREMQ03060 361 aa8.9□□□□□ -0.98
TRAF3-205ENST00000558700 MTMR3Q13615 1198 aa8.9□□□□□ -0.98
TRAF3-205ENST00000558700 RABEP1Q15276 862 aa8.9□□□□□ -0.98
TRAF3-205ENST00000558700 ZNF174Q15697 407 aa8.9□□□□□ -0.98
TRAF3-205ENST00000558700 FAM187BQ17R55 369 aa8.9□□□□□ -0.98
TRAF3-205ENST00000558700 C8orf34Q49A92 452 aa8.9□□□□□ -0.98
TRAF3-205ENST00000558700 ATAT1Q5SQI0 421 aa8.9□□□□□ -0.98
TRAF3-205ENST00000558700 CCDC149Q6ZUS6 474 aa8.9□□□□□ -0.98
TRAF3-205ENST00000558700 MAEAQ7L5Y9 396 aa8.9□□□□□ -0.98
TRAF3-205ENST00000558700 ZFRQ96KR1 1074 aaKnown RBP8.9□□□□□ -0.98
TRAF3-205ENST00000558700 ZFP42Q96MM3 310 aa8.9□□□□□ -0.98
TRAF3-205ENST00000558700 KLHL5Q96PQ7 755 aa8.9□□□□□ -0.98
TRAF3-205ENST00000558700 PRRX2Q99811 253 aa8.9□□□□□ -0.98
TRAF3-205ENST00000558700 ADPGKQ9BRR6 497 aa8.9□□□□□ -0.98
TRAF3-205ENST00000558700 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.9□□□□□ -0.98
TRAF3-205ENST00000558700 CDH22Q9UJ99 828 aa8.9□□□□□ -0.98
TRAF3-205ENST00000558700 NOVA2Q9UNW9 492 aaKnown RBP8.9□□□□□ -0.98
TRAF3-205ENST00000558700 SORCS3Q9UPU3 1222 aa8.9□□□□□ -0.98
TRAF3-205ENST00000558700 SF3B1O75533 1304 aaKnown RBP eCLIP8.89□□□□□ -0.99
TRAF3-205ENST00000558700 PHLPP2Q6ZVD8 1323 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 A0A1B0GUA9 196 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 LAD1O00515 517 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 C2CD2LO14523 706 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 GLUD1P00367 558 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 CNPP09543 421 aaKnown RBP8.89□□□□□ -0.99
TRAF3-205ENST00000558700 WEE2P0C1S8 567 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 CYP11B2P19099 503 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 DSG1Q02413 1049 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 PRPF4BQ13523 1007 aaKnown RBP8.89□□□□□ -0.99
TRAF3-205ENST00000558700 MAPK6Q16659 721 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 DCAF4L1Q3SXM0 396 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 VARS2Q5ST30 1063 aaKnown RBP8.89□□□□□ -0.99
TRAF3-205ENST00000558700 DMRTA1Q5VZB9 504 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 FUT10Q6P4F1 479 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 C15orf39Q6ZRI6 1047 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 OTOP3Q7RTS5 596 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 APBB1IPQ7Z5R6 666 aaPredicted RBP8.89□□□□□ -0.99
TRAF3-205ENST00000558700 GPR149Q86SP6 731 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 CDR2LQ86X02 465 aaPredicted RBP8.89□□□□□ -0.99
TRAF3-205ENST00000558700 GPR65Q8IYL9 337 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 UBALD2Q8IYN6 164 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 RNF168Q8IYW5 571 aaPredicted RBP8.89□□□□□ -0.99
TRAF3-205ENST00000558700 FBXL6Q8N531 539 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 CMASQ8NFW8 434 aaPredicted RBP8.89□□□□□ -0.99
TRAF3-205ENST00000558700 SNX29Q8TEQ0 813 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 KIFAP3Q92845 792 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 IFT74Q96LB3 600 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 COLEC11Q9BWP8 271 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 PDZD7Q9H5P4 517 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 UPF2Q9HAU5 1272 aaKnown RBP8.89□□□□□ -0.99
TRAF3-205ENST00000558700 MAN1C1Q9NR34 630 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 PARP2Q9UGN5 583 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 ADAM28Q9UKQ2 775 aa8.89□□□□□ -0.99
TRAF3-205ENST00000558700 MTCL1Q9Y4B5 1905 aaKnown RBP8.88□□□□□ -0.99
TRAF3-205ENST00000558700 A0A087WWV3 80 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 ACKR2O00590 384 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 RECQL4O94761 1208 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 LIG1P18858 919 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 AKAP5P24588 427 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 U2AF2P26368 475 aaKnown RBP eCLIP8.88□□□□□ -0.99
TRAF3-205ENST00000558700 PRPHP41219 470 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 EFNA5P52803 228 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 MCCD1P59942 119 aaPredicted RBP8.88□□□□□ -0.99
TRAF3-205ENST00000558700 NHLH1Q02575 133 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 TUSC3Q13454 348 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 USP41Q3LFD5 358 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 TMC5Q6UXY8 1006 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 CYP26C1Q6V0L0 522 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 ZDHHC14Q8IZN3 488 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 C12orf76Q8N812 135 aaPredicted RBP8.88□□□□□ -0.99
TRAF3-205ENST00000558700 IGSF22Q8N9C0 903 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 KREMEN2Q8NCW0 462 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 BSNDQ8WZ55 320 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 STAMQ92783 540 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 ACSF2Q96CM8 615 aaPredicted RBP8.88□□□□□ -0.99
TRAF3-205ENST00000558700 KIF2CQ99661 725 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 CCDC113Q9H0I3 377 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 BHMT2Q9H2M3 363 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 FZD8Q9H461 694 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 RXFP1Q9HBX9 757 aa8.88□□□□□ -0.99
TRAF3-205ENST00000558700 KLK14Q9P0G3 267 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms