RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 RBM41Q96IZ5 413 aaKnown RBP14.72□□□□□ -0.05
SPG11-210ENST00000558319 ZSCAN32Q9NX65 697 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 NUP160Q12769 1436 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 PALLDQ8WX93 1383 aa14.72□□□□□ -0.05
SPG11-210ENST00000558319 FOXN1O15353 648 aa14.71□□□□□ -0.05
SPG11-210ENST00000558319 TYK2P29597 1187 aa14.71□□□□□ -0.05
SPG11-210ENST00000558319 HMGCS2P54868 508 aa14.71□□□□□ -0.05
SPG11-210ENST00000558319 ZC3H15Q8WU90 426 aaKnown RBP14.71□□□□□ -0.05
SPG11-210ENST00000558319 SPIRE2Q8WWL2 714 aa14.71□□□□□ -0.05
SPG11-210ENST00000558319 TBC1D4O60343 1298 aa14.71□□□□□ -0.05
SPG11-210ENST00000558319 CPA2P48052 419 aa14.71□□□□□ -0.05
SPG11-210ENST00000558319 SPDYAQ5MJ70 313 aa14.71□□□□□ -0.05
SPG11-210ENST00000558319 IFNEQ86WN2 208 aa14.71□□□□□ -0.05
SPG11-210ENST00000558319 SLC17A8Q8NDX2 589 aa14.71□□□□□ -0.05
SPG11-210ENST00000558319 CATSPER1Q8NEC5 780 aa14.71□□□□□ -0.05
SPG11-210ENST00000558319 TMEM143Q96AN5 459 aa14.71□□□□□ -0.05
SPG11-210ENST00000558319 MAGEB10Q96LZ2 347 aaPredicted RBP14.71□□□□□ -0.05
SPG11-210ENST00000558319 EXOSC4Q9NPD3 245 aaKnown RBP14.71□□□□□ -0.05
SPG11-210ENST00000558319 ADGRG1Q9Y653 693 aa14.71□□□□□ -0.05
SPG11-210ENST00000558319 ADGRA2Q96PE1 1338 aa14.71□□□□□ -0.05
SPG11-210ENST00000558319 AIM2O14862 343 aa14.71□□□□□ -0.05
SPG11-210ENST00000558319 CAV1Q03135 178 aa14.71□□□□□ -0.05
SPG11-210ENST00000558319 MTMR2Q13614 643 aa14.71□□□□□ -0.05
SPG11-210ENST00000558319 TRIP10Q15642 601 aa14.71□□□□□ -0.05
SPG11-210ENST00000558319 SEPT5Q99719 369 aaPredicted RBP14.71□□□□□ -0.05
SPG11-210ENST00000558319 SEL1LQ9UBV2 794 aa14.71□□□□□ -0.05
SPG11-210ENST00000558319 SLC25A41Q8N5S1 370 aa14.71□□□□□ -0.05
SPG11-210ENST00000558319 TRABDQ9H4I3 376 aa14.71□□□□□ -0.05
SPG11-210ENST00000558319 C20orf96Q9NUD7 363 aaPredicted RBP14.71□□□□□ -0.05
SPG11-210ENST00000558319 SENP1Q9P0U3 644 aa14.71□□□□□ -0.05
SPG11-210ENST00000558319 CIAO1O76071 339 aa14.71□□□□□ -0.06
SPG11-210ENST00000558319 TDP2O95551 362 aa14.71□□□□□ -0.06
SPG11-210ENST00000558319 FTLP02792 175 aaPredicted RBP14.71□□□□□ -0.06
SPG11-210ENST00000558319 FCER1AP12319 257 aa14.71□□□□□ -0.06
SPG11-210ENST00000558319 CTCFP49711 727 aaPredicted RBP14.71□□□□□ -0.06
SPG11-210ENST00000558319 AMHR2Q16671 573 aa14.71□□□□□ -0.06
SPG11-210ENST00000558319 STAG2Q8N3U4 1231 aa14.71□□□□□ -0.06
SPG11-210ENST00000558319 OR6J1Q8NGC5 347 aa14.71□□□□□ -0.06
SPG11-210ENST00000558319 CALR3Q96L12 384 aaKnown RBP14.71□□□□□ -0.06
SPG11-210ENST00000558319 BATF3Q9NR55 127 aa14.71□□□□□ -0.06
SPG11-210ENST00000558319 SMARCAL1Q9NZC9 954 aa14.71□□□□□ -0.06
SPG11-210ENST00000558319 ZC3H4Q9UPT8 1303 aaKnown RBP14.71□□□□□ -0.06
SPG11-210ENST00000558319 PRPF3O43395 683 aaKnown RBP14.7□□□□□ -0.06
SPG11-210ENST00000558319 NR3C1P04150 777 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 COASYQ13057 564 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 SGO1Q5FBB7 561 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 EPHA10Q5JZY3 1008 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 KRT39Q6A163 491 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 RRM2BQ7LG56 351 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 C4orf33Q8N1A6 199 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 COQ7Q99807 217 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 TMEM47Q9BQJ4 181 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 IL1RL2Q9HB29 575 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 TMEM161AQ9NX61 479 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 MYBL1P10243 752 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 RARBP10826 455 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 ARSEP51690 589 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 TRIM25Q14258 630 aaKnown RBP14.7□□□□□ -0.06
SPG11-210ENST00000558319 LRRC8BQ6P9F7 803 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 CPA5Q8WXQ8 436 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 ERP27Q96DN0 273 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 TSSK1BQ9BXA7 367 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 HSPBP1Q9NZL4 362 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 ATP10DQ9P241 1426 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 SULT1E1P49888 294 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 LRRC31Q6UY01 552 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 BEST2Q8NFU1 509 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 GRAMD1AQ96CP6 724 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 TRIM51Q9BSJ1 452 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 BLMP54132 1417 aaPredicted RBP14.7□□□□□ -0.06
SPG11-210ENST00000558319 IGF2BP3O00425 579 aaKnown RBP eCLIP14.7□□□□□ -0.06
SPG11-210ENST00000558319 CYP2E1P05181 493 aaPredicted RBP14.7□□□□□ -0.06
SPG11-210ENST00000558319 NNMTP40261 264 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 MAP3K10Q02779 954 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 INPP5AQ14642 412 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 C1orf131Q8NDD1 294 aaKnown RBP14.7□□□□□ -0.06
SPG11-210ENST00000558319 ACAP3Q96P50 834 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 BBS2Q9BXC9 721 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 DYRK4Q9NR20 520 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 USE1Q9NZ43 259 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 PNMA3Q9UL41 463 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 RFX3P48380 749 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 ACOT2P49753 483 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 ROR1Q01973 937 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 KCNH2Q12809 1159 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 KRT72Q14CN4 511 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 SPATA4Q8NEY3 305 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 WWP1Q9H0M0 922 aa14.7□□□□□ -0.06
SPG11-210ENST00000558319 PLIN5Q00G26 463 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 PPP1R2P3Q6NXS1 205 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 STX19Q8N4C7 294 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 CDHR1Q96JP9 859 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 CLMNQ96JQ2 1002 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 KLHL25Q9H0H3 589 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 DHX36Q9H2U1 1008 aaKnown RBP14.69□□□□□ -0.06
SPG11-210ENST00000558319 GID8Q9NWU2 228 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 C6orf203Q9P0P8 240 aaPredicted RBP14.69□□□□□ -0.06
SPG11-210ENST00000558319 TRIM10Q9UDY6 481 aa14.69□□□□□ -0.06
SPG11-210ENST00000558319 USP15Q9Y4E8 981 aaPredicted RBP14.69□□□□□ -0.06
SPG11-210ENST00000558319 CTTNBP2Q8WZ74 1663 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms