RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 TMX3Q96JJ7 454 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 MRGPRX4Q96LA9 322 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 VRK1Q99986 396 aaPredicted RBP4.38□□□□□ -1.71
TDP1-217ENST00000557782 CHCHD6Q9BRQ6 235 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 PRKRIP1Q9H875 184 aaPredicted RBP4.38□□□□□ -1.71
TDP1-217ENST00000557782 SAYSD1Q9NPB0 183 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 SMYD2Q9NRG4 433 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 GJB4Q9NTQ9 266 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 NSMCE4AQ9NXX6 385 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 KCMF1Q9P0J7 381 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 FBLN5Q9UBX5 448 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 NUDT5Q9UKK9 219 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 ITGB1BP2Q9UKP3 347 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 PALD1Q9ULE6 856 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 PCDHA6Q9UN73 950 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 SNX11Q9Y5W9 270 aa4.38□□□□□ -1.71
TDP1-217ENST00000557782 A0A087X0M5 115 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 A0A1B0GX30 115 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 FSD2A1L4K1 749 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 AQP12BA6NM10 295 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 FAM170BA6NMN3 283 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 CLCA1A8K7I4 914 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 F5H0A9 414 aaPredicted RBP4.37□□□□□ -1.71
TDP1-217ENST00000557782 ZBED4O75132 1171 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 SEC24DO94855 1032 aaPredicted RBP4.37□□□□□ -1.71
TDP1-217ENST00000557782 MT-ND5P03915 603 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 ITGA5P08648 1049 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 ATP1A3P13637 1013 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 IDEP14735 1019 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 SYN1P17600 705 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 MALP21145 153 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 APEX1P27695 318 aaKnown RBP4.37□□□□□ -1.71
TDP1-217ENST00000557782 ECHS1P30084 290 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 ATXN1P54253 815 aaKnown RBP4.37□□□□□ -1.71
TDP1-217ENST00000557782 POLE2P56282 527 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 PER3P56645 1201 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 SESN2P58004 480 aaPredicted RBP4.37□□□□□ -1.71
TDP1-217ENST00000557782 HTRA4P83105 476 aaPredicted RBP4.37□□□□□ -1.71
TDP1-217ENST00000557782 FOXO4P98177 505 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 TARDBPQ13148 414 aaKnown RBP eCLIP4.37□□□□□ -1.71
TDP1-217ENST00000557782 MAPK7Q13164 816 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 SEPT2Q15019 361 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 SLC14A2Q15849 920 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 SKIDA1Q1XH10 827 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 CCDC184Q52MB2 194 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 SLC45A4Q5BKX6 768 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 GPATCH4Q5T3I0 446 aaKnown RBP4.37□□□□□ -1.71
TDP1-217ENST00000557782 ZNF783Q6ZMS7 281 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 CEP128Q6ZU80 1094 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 NEK10Q6ZWH5 1172 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 RNF44Q7L0R7 432 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 BMP8AQ7Z5Y6 402 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 FAM129CQ86XR2 697 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 SIAH1Q8IUQ4 282 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 FAM181AQ8N9Y4 354 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 SIMC1Q8NDZ2 872 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 UCMAQ8WVF2 138 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 RAB24Q969Q5 203 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 RSRC1Q96IZ7 334 aaKnown RBP4.37□□□□□ -1.71
TDP1-217ENST00000557782 MAELQ96JY0 434 aaKnown RBP4.37□□□□□ -1.71
TDP1-217ENST00000557782 MEGF10Q96KG7 1140 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 MRGPRX1Q96LB2 322 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 TIGD1Q96MW7 591 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 DMRTA2Q96SC8 542 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 TREX2Q9BQ50 279 aaPredicted RBP4.37□□□□□ -1.71
TDP1-217ENST00000557782 DBNDD2Q9BQY9 259 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 METTL22Q9BUU2 404 aaPredicted RBP4.37□□□□□ -1.71
TDP1-217ENST00000557782 AP1M1Q9BXS5 423 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 TRIM54Q9BYV2 358 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 ATP13A1Q9HD20 1204 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 NECTIN3Q9NQS3 549 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 INCENPQ9NQS7 918 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 STK32BQ9NY57 414 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 NKIRAS2Q9NYR9 191 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 PCDHA1Q9Y5I3 950 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 RPTORQ8N122 1335 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 PITPNM2Q9BZ72 1349 aa4.37□□□□□ -1.71
TDP1-217ENST00000557782 TMEM265A0A087WTH1 108 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 FAM170AA1A519 330 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 FAM234BA2RU67 622 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 TRIM43BA6NCK2 446 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 TISP43B9A030 160 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 B9A039 149 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 NFIBO00712 420 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 SGSM2O43147 1006 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 USP2O75604 605 aaPredicted RBP4.36□□□□□ -1.71
TDP1-217ENST00000557782 MPIG6BO95866 241 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 ITGA2BP08514 1039 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 ALOX15P16050 662 aaPredicted RBP4.36□□□□□ -1.71
TDP1-217ENST00000557782 KRT20P35900 424 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 KCNJ5P48544 419 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 SOX8P57073 446 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 DCAF7P61962 342 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 VAMP2P63027 116 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 SNRPNP63162 240 aaKnown RBP4.36□□□□□ -1.71
TDP1-217ENST00000557782 MVKQ03426 396 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 TLE1Q04724 770 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 FSTL1Q12841 308 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 SLC13A2Q13183 592 aa4.36□□□□□ -1.71
TDP1-217ENST00000557782 SNAPC2Q13487 334 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms