RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 KREMEN1Q96MU8 473 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 ZNF577Q9BSK1 485 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 TEKT3Q9BXF9 490 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 TMEM117Q9H0C3 514 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 EHMT1Q9H9B1 1298 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 NINJ2Q9NZG7 142 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 HSPBP1Q9NZL4 362 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 PRR12Q9ULL5 1215 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 TISP43B9A030 160 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 SORBS3O60504 671 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 WFS1O76024 890 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 POLR2MP0CAP2 368 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 POTEJP0CG39 1038 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 ADRA2BP18089 450 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 IVDP26440 423 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 CACNB3P54284 484 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 CDR2Q01850 454 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 MKRN4PQ13434 485 aaPredicted RBP12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 CEP55Q53EZ4 464 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 PADI6Q6TGC4 694 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 ERICH1Q86X53 443 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 SHC3Q92529 594 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 CNKSR1Q969H4 720 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 ZNF570Q96NI8 536 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 CBWD1Q9BRT8 395 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 CHST7Q9NS84 486 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 TXLNGQ9NUQ3 528 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 DNAJC17Q9NVM6 304 aaKnown RBP12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 ACTL7BQ9Y614 415 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 LY75O60449 1722 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 FOXO6A8MYZ6 492 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 MAPK13O15264 365 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 CYP11B1P15538 503 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 ATP2A2P16615 1042 aaKnown RBP12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 ADCY8P40145 1251 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 IL9RQ01113 521 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 DOK7Q18PE1 504 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 CGB2Q6NT52 195 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 SRRM1Q8IYB3 904 aaKnown RBP12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 SPICE1Q8N0Z3 855 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 ANKRD35Q8N283 1001 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 ZDHHC15Q96MV8 337 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 ACP6Q9NPH0 428 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 SLC5A4Q9NY91 659 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 ADAM22Q9P0K1 906 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 TRIM33Q9UPN9 1127 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 ZNFX1Q9P2E3 1918 aaKnown RBP12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 G3V3G9 751 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 UNC5CO95185 931 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 MAPK4P31152 587 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 UBXN2AP68543 259 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 STAT4Q14765 748 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 TRIP13Q15645 432 aaPredicted RBP12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 DCAF8Q5TAQ9 597 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 ACAD10Q6JQN1 1059 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 MAEAQ7L5Y9 396 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 CYP4X1Q8N118 509 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 BBOF1Q8ND07 529 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 ATL2Q8NHH9 583 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 PLEKHO2Q8TD55 490 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 ATG4AQ8WYN0 398 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 KIFAP3Q92845 792 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 PITPNM3Q9BZ71 974 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 DCLK3Q9C098 648 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 KCNQ5Q9NR82 932 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 TBK1Q9UHD2 729 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 NAALADL1Q9UQQ1 740 aa12.61□□□□□ -0.39
VIPAS39-211ENST00000557658 ATP5HO75947 161 aa12.6□□□□□ -0.39
VIPAS39-211ENST00000557658 GYS1P13807 737 aa12.6□□□□□ -0.39
VIPAS39-211ENST00000557658 TAC1P20366 129 aa12.6□□□□□ -0.39
VIPAS39-211ENST00000557658 MGAT5Q09328 741 aa12.6□□□□□ -0.39
VIPAS39-211ENST00000557658 SETDB1Q15047 1291 aa12.6□□□□□ -0.39
VIPAS39-211ENST00000557658 ECHDC2Q86YB7 292 aa12.6□□□□□ -0.39
VIPAS39-211ENST00000557658 ANKRD27Q96NW4 1050 aa12.6□□□□□ -0.39
VIPAS39-211ENST00000557658 ETNK1Q9HBU6 452 aa12.6□□□□□ -0.39
VIPAS39-211ENST00000557658 ANAPC7Q9UJX3 599 aa12.6□□□□□ -0.39
VIPAS39-211ENST00000557658 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.6□□□□□ -0.39
VIPAS39-211ENST00000557658 ARP10275 920 aa12.6□□□□□ -0.39
VIPAS39-211ENST00000557658 CCNG1P51959 295 aa12.6□□□□□ -0.39
VIPAS39-211ENST00000557658 SNRPFP62306 86 aaKnown RBP12.6□□□□□ -0.39
VIPAS39-211ENST00000557658 CENPCQ03188 943 aa12.6□□□□□ -0.39
VIPAS39-211ENST00000557658 SH3BP5LQ7L8J4 393 aa12.6□□□□□ -0.39
VIPAS39-211ENST00000557658 DHX37Q8IY37 1157 aaKnown RBP12.6□□□□□ -0.39
VIPAS39-211ENST00000557658 IDI2Q9BXS1 227 aa12.6□□□□□ -0.39
VIPAS39-211ENST00000557658 FAM198AQ9UFP1 575 aa12.6□□□□□ -0.39
VIPAS39-211ENST00000557658 CCDC189A1A4V9 331 aa12.59□□□□□ -0.39
VIPAS39-211ENST00000557658 HGSO14964 777 aaPredicted RBP12.59□□□□□ -0.39
VIPAS39-211ENST00000557658 CLGNO14967 610 aa12.59□□□□□ -0.39
VIPAS39-211ENST00000557658 LUC7L3O95232 432 aaKnown RBP12.59□□□□□ -0.39
VIPAS39-211ENST00000557658 CETPP11597 493 aa12.59□□□□□ -0.39
VIPAS39-211ENST00000557658 STAT2P52630 851 aa12.59□□□□□ -0.39
VIPAS39-211ENST00000557658 ANKRD20A2Q5SQ80 823 aa12.59□□□□□ -0.39
VIPAS39-211ENST00000557658 ANKRD20A1Q5TYW2 823 aa12.59□□□□□ -0.39
VIPAS39-211ENST00000557658 ANKRD20A3Q5VUR7 823 aa12.59□□□□□ -0.39
VIPAS39-211ENST00000557658 B3GNT9Q6UX72 402 aa12.59□□□□□ -0.39
VIPAS39-211ENST00000557658 CEP128Q6ZU80 1094 aa12.59□□□□□ -0.39
VIPAS39-211ENST00000557658 RIBC1Q8N443 379 aaPredicted RBP12.59□□□□□ -0.39
VIPAS39-211ENST00000557658 GSTTP1A0A1W2PQM5 241 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms