RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 CAPS2Q9BXY5 557 aa20.69■□□□□ 0.9
FOXN3-214ENST00000557258 C1orf112Q9NSG2 853 aa20.69■□□□□ 0.9
FOXN3-214ENST00000557258 CNOT8Q9UFF9 292 aaKnown RBP20.69■□□□□ 0.9
FOXN3-214ENST00000557258 MAPK13O15264 365 aa20.69■□□□□ 0.9
FOXN3-214ENST00000557258 IRAK1P51617 712 aa20.69■□□□□ 0.9
FOXN3-214ENST00000557258 DHX9Q08211 1270 aaKnown RBP20.69■□□□□ 0.9
FOXN3-214ENST00000557258 TTC27Q6P3X3 843 aa20.69■□□□□ 0.9
FOXN3-214ENST00000557258 OR5B17Q8NGF7 314 aa20.69■□□□□ 0.9
FOXN3-214ENST00000557258 SLC7A3Q8WY07 619 aa20.69■□□□□ 0.9
FOXN3-214ENST00000557258 CDHR1Q96JP9 859 aa20.69■□□□□ 0.9
FOXN3-214ENST00000557258 COQ4Q9Y3A0 265 aa20.69■□□□□ 0.9
FOXN3-214ENST00000557258 GRIN3BO60391 1043 aa20.68■□□□□ 0.9
FOXN3-214ENST00000557258 HLA-DRAP01903 254 aa20.68■□□□□ 0.9
FOXN3-214ENST00000557258 PLTPP55058 493 aa20.68■□□□□ 0.9
FOXN3-214ENST00000557258 POU5F1Q01860 360 aaKnown RBP20.68■□□□□ 0.9
FOXN3-214ENST00000557258 PDE4CQ08493 712 aa20.68■□□□□ 0.9
FOXN3-214ENST00000557258 CRELD2Q6UXH1 353 aaPredicted RBP20.68■□□□□ 0.9
FOXN3-214ENST00000557258 FMNL3Q8IVF7 1028 aa20.68■□□□□ 0.9
FOXN3-214ENST00000557258 LRRC71Q8N4P6 559 aa20.68■□□□□ 0.9
FOXN3-214ENST00000557258 SLC17A8Q8NDX2 589 aa20.68■□□□□ 0.9
FOXN3-214ENST00000557258 UHMK1Q8TAS1 419 aaKnown RBP20.68■□□□□ 0.9
FOXN3-214ENST00000557258 FAM118BQ9BPY3 351 aa20.68■□□□□ 0.9
FOXN3-214ENST00000557258 RBAKQ9NYW8 714 aaPredicted RBP20.68■□□□□ 0.9
FOXN3-214ENST00000557258 PNMA2Q9UL42 364 aa20.68■□□□□ 0.9
FOXN3-214ENST00000557258 SOWAHBA6NEL2 793 aa20.68■□□□□ 0.9
FOXN3-214ENST00000557258 SRGAP2CP0DJJ0 459 aa20.68■□□□□ 0.9
FOXN3-214ENST00000557258 TNFSF9P41273 254 aa20.68■□□□□ 0.9
FOXN3-214ENST00000557258 PTENP60484 403 aa20.68■□□□□ 0.9
FOXN3-214ENST00000557258 CUL1Q13616 776 aa20.68■□□□□ 0.9
FOXN3-214ENST00000557258 UBL4BQ8N7F7 174 aa20.68■□□□□ 0.9
FOXN3-214ENST00000557258 ATP8B4Q8TF62 1192 aa20.68■□□□□ 0.9
FOXN3-214ENST00000557258 MSTO1Q9BUK6 570 aa20.68■□□□□ 0.9
FOXN3-214ENST00000557258 NFASCO94856 1347 aa20.68■□□□□ 0.9
FOXN3-214ENST00000557258 O00370 1275 aa20.67■□□□□ 0.9
FOXN3-214ENST00000557258 HSPA9P38646 679 aaKnown RBP20.67■□□□□ 0.9
FOXN3-214ENST00000557258 PRELID2Q8N945 189 aa20.67■□□□□ 0.9
FOXN3-214ENST00000557258 TMC2Q8TDI7 906 aa20.67■□□□□ 0.9
FOXN3-214ENST00000557258 TMEM174Q8WUU8 243 aa20.67■□□□□ 0.9
FOXN3-214ENST00000557258 TRAPPC12Q8WVT3 735 aa20.67■□□□□ 0.9
FOXN3-214ENST00000557258 MAGOHBQ96A72 148 aaKnown RBP20.67■□□□□ 0.9
FOXN3-214ENST00000557258 SGIP1Q9BQI5 828 aa20.67■□□□□ 0.9
FOXN3-214ENST00000557258 APOBEC3GQ9HC16 384 aaKnown RBP20.67■□□□□ 0.9
FOXN3-214ENST00000557258 ANAPC7Q9UJX3 599 aa20.67■□□□□ 0.9
FOXN3-214ENST00000557258 MAFBQ9Y5Q3 323 aaPredicted RBP20.67■□□□□ 0.9
FOXN3-214ENST00000557258 GSTTP1A0A1W2PQM5 241 aa20.67■□□□□ 0.9
FOXN3-214ENST00000557258 ARIH2O95376 493 aa20.67■□□□□ 0.9
FOXN3-214ENST00000557258 VNN1O95497 513 aa20.67■□□□□ 0.9
FOXN3-214ENST00000557258 RRM1P23921 792 aa20.67■□□□□ 0.9
FOXN3-214ENST00000557258 GJC1P36383 396 aa20.67■□□□□ 0.9
FOXN3-214ENST00000557258 OSTNP61366 133 aa20.67■□□□□ 0.9
FOXN3-214ENST00000557258 SNRPFP62306 86 aaKnown RBP20.67■□□□□ 0.9
FOXN3-214ENST00000557258 SNX1Q13596 522 aa20.67■□□□□ 0.9
FOXN3-214ENST00000557258 TMEM270Q6UE05 265 aa20.67■□□□□ 0.9
FOXN3-214ENST00000557258 SLITRK6Q9H5Y7 841 aa20.67■□□□□ 0.9
FOXN3-214ENST00000557258 C17orf75Q9HAS0 396 aa20.67■□□□□ 0.9
FOXN3-214ENST00000557258 CD2APQ9Y5K6 639 aa20.67■□□□□ 0.9
FOXN3-214ENST00000557258 GOLGA6L10A0A0M3HER8 536 aa20.66■□□□□ 0.9
FOXN3-214ENST00000557258 DCDC2CA8MYV0 355 aa20.66■□□□□ 0.9
FOXN3-214ENST00000557258 ATP2A1O14983 1001 aa20.66■□□□□ 0.9
FOXN3-214ENST00000557258 CLDN3O15551 220 aa20.66■□□□□ 0.9
FOXN3-214ENST00000557258 EXTL3O43909 919 aa20.66■□□□□ 0.9
FOXN3-214ENST00000557258 ATP8B3O60423 1300 aa20.66■□□□□ 0.9
FOXN3-214ENST00000557258 FARP2O94887 1054 aaPredicted RBP20.66■□□□□ 0.9
FOXN3-214ENST00000557258 GGPS1O95749 300 aa20.66■□□□□ 0.9
FOXN3-214ENST00000557258 LCTP09848 1927 aa20.66■□□□□ 0.9
FOXN3-214ENST00000557258 TCF7P36402 384 aaPredicted RBP20.66■□□□□ 0.9
FOXN3-214ENST00000557258 PEX5P50542 639 aa20.66■□□□□ 0.9
FOXN3-214ENST00000557258 BRCA2P51587 3418 aa20.66■□□□□ 0.9
FOXN3-214ENST00000557258 JAMLQ86YT9 394 aa20.66■□□□□ 0.9
FOXN3-214ENST00000557258 PSPC1Q8WXF1 523 aaKnown RBP20.66■□□□□ 0.9
FOXN3-214ENST00000557258 CYFIP2Q96F07 1278 aa20.66■□□□□ 0.9
FOXN3-214ENST00000557258 PPP1R16BQ96T49 567 aa20.66■□□□□ 0.9
FOXN3-214ENST00000557258 TCHPQ9BT92 498 aa20.66■□□□□ 0.9
FOXN3-214ENST00000557258 PORCNQ9H237 461 aa20.66■□□□□ 0.9
FOXN3-214ENST00000557258 ZNF394Q53GI3 561 aa20.66■□□□□ 0.9
FOXN3-214ENST00000557258 C11orf63Q6NUN7 778 aa20.66■□□□□ 0.9
FOXN3-214ENST00000557258 LBX2Q6XYB7 198 aa20.66■□□□□ 0.9
FOXN3-214ENST00000557258 HVCN1Q96D96 273 aa20.66■□□□□ 0.9
FOXN3-214ENST00000557258 ZNFX1Q9P2E3 1918 aaKnown RBP20.66■□□□□ 0.9
FOXN3-214ENST00000557258 LTBP3Q9NS15 1303 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 SMIM23A6NLE4 172 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 DKC1O60832 514 aaKnown RBP eCLIP20.65■□□□□ 0.94e-10■■■■■ 53.1
FOXN3-214ENST00000557258 GARTP22102 1010 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 CAPSQ13938 189 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 HSDL1Q3SXM5 330 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 TMC3Q7Z5M5 1100 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 C1orf54Q8WWF1 131 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 TXNRD2Q9NNW7 524 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 DAAM1Q9Y4D1 1078 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 ARID2Q68CP9 1835 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 GRIN2DO15399 1336 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 TRIM66O15016 1216 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 GZMAP12544 262 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 CCT5P48643 541 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 ZNF844Q08AG5 666 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 TTLL12Q14166 644 aaPredicted RBP20.65■□□□□ 0.9
FOXN3-214ENST00000557258 WDR44Q5JSH3 913 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 GPC2Q8N158 579 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 MREGQ8N565 214 aa20.65■□□□□ 0.9
FOXN3-214ENST00000557258 FBXO25Q8TCJ0 367 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms