RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 CXCL8P10145 99 aa14.95□□□□□ -0.02
EFCAB11-212ENST00000556639 HOXA11P31270 313 aaPredicted RBP14.95□□□□□ -0.02
EFCAB11-212ENST00000556639 KIF11P52732 1056 aa14.95□□□□□ -0.02
EFCAB11-212ENST00000556639 SPOPLQ6IQ16 392 aa14.95□□□□□ -0.02
EFCAB11-212ENST00000556639 FBXL13Q8NEE6 735 aa14.95□□□□□ -0.02
EFCAB11-212ENST00000556639 SYN2Q92777 582 aaPredicted RBP14.95□□□□□ -0.02
EFCAB11-212ENST00000556639 ERO1AQ96HE7 468 aa14.95□□□□□ -0.02
EFCAB11-212ENST00000556639 KREMEN1Q96MU8 473 aa14.95□□□□□ -0.02
EFCAB11-212ENST00000556639 DDX20Q9UHI6 824 aaKnown RBP14.95□□□□□ -0.02
EFCAB11-212ENST00000556639 FBXL5Q9UKA1 691 aa14.95□□□□□ -0.02
EFCAB11-212ENST00000556639 PTCH2Q9Y6C5 1203 aa14.95□□□□□ -0.02
EFCAB11-212ENST00000556639 ERLIN2O94905 339 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 ARHGAP25P42331 645 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 PTK2Q05397 1052 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 KLHL30Q0D2K2 578 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 CETN1Q12798 172 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 BIRC3Q13489 604 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 ZACNQ401N2 412 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 ZNF571Q7Z3V5 609 aaPredicted RBP14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 SH3TC2Q8TF17 1288 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 CGRRF1Q99675 332 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 STK33Q9BYT3 514 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 CXCL16Q9H2A7 254 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 GTF2IRD1Q9UHL9 959 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 TRIM17Q9Y577 477 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 PMM2O15305 246 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 HLA-DRAP01903 254 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 SERPING1P05155 500 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 NKX3-2P78367 333 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 SLC9C1Q4G0N8 1177 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 SYT10Q6XYQ8 523 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 SRGAP1Q7Z6B7 1085 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 EFCAB13Q8IY85 973 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 PPM1KQ8N3J5 372 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 HELQQ8TDG4 1101 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 PXYLP1Q8TE99 480 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 GCOM2Q9BZD3 368 aaPredicted RBP14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 OSBPL7Q9BZF2 842 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 LACRTQ9GZZ8 138 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 DEF6Q9H4E7 631 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 ACP6Q9NPH0 428 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 DUSP10Q9Y6W6 482 aa14.94□□□□□ -0.02
EFCAB11-212ENST00000556639 A0A1B0GUA9 196 aa14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 EIF3CLB5ME19 914 aaKnown RBP14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 AKR1B10O60218 316 aa14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 EVI5O60447 810 aa14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 KPNA6O60684 536 aa14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 CST3P01034 146 aaPredicted RBP14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 STAG3L1P0CL83 205 aa14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 DARSP14868 501 aaKnown RBP14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 GTF2H1P32780 548 aa14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 CYLC1P35663 651 aaPredicted RBP14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 CATSPER4Q7RTX7 472 aa14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 CCDC170Q8IYT3 715 aa14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 DHX38Q92620 1227 aaKnown RBP14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 PRIMPOLQ96LW4 560 aa14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 EIF3CQ99613 913 aaKnown RBP14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 EIF2AQ9BY44 585 aaKnown RBP14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 MTMR12Q9C0I1 747 aa14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 NUCKS1Q9H1E3 243 aaKnown RBP14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 ADAMTS1Q9UHI8 967 aa14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 ANK1P16157 1881 aa14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 A0A087X0T9 212 aa14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 FAM228BP0C875 321 aa14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 EIF4BP23588 611 aaKnown RBP14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 SOX5P35711 763 aa14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 MAPK8IP2Q13387 824 aaPredicted RBP14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 SNX17Q15036 470 aa14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 LHX8Q68G74 356 aa14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 USP37Q86T82 979 aa14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 ARID3AQ99856 593 aa14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 RNF19AQ9NV58 838 aa14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 R3HCC1Q9Y3T6 440 aaKnown RBP14.93□□□□□ -0.02
EFCAB11-212ENST00000556639 CALCAP01258 141 aa14.92□□□□□ -0.02
EFCAB11-212ENST00000556639 CTSHP09668 335 aa14.92□□□□□ -0.02
EFCAB11-212ENST00000556639 GRK4P32298 578 aa14.92□□□□□ -0.02
EFCAB11-212ENST00000556639 STAT1P42224 750 aa14.92□□□□□ -0.02
EFCAB11-212ENST00000556639 OLIG1Q8TAK6 271 aa14.92□□□□□ -0.02
EFCAB11-212ENST00000556639 VTI1AQ96AJ9 217 aa14.92□□□□□ -0.02
EFCAB11-212ENST00000556639 WDR24Q96S15 920 aa14.92□□□□□ -0.02
EFCAB11-212ENST00000556639 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.92□□□□□ -0.02
EFCAB11-212ENST00000556639 APOBEC3GQ9HC16 384 aaKnown RBP14.92□□□□□ -0.02
EFCAB11-212ENST00000556639 HES2Q9Y543 173 aa14.92□□□□□ -0.02
EFCAB11-212ENST00000556639 UMODL1Q5DID0 1318 aa14.92□□□□□ -0.02
EFCAB11-212ENST00000556639 LACTBL1A8MY62 500 aa14.92□□□□□ -0.02
EFCAB11-212ENST00000556639 NPTXRO95502 500 aa14.92□□□□□ -0.02
EFCAB11-212ENST00000556639 GNAT1P11488 350 aa14.92□□□□□ -0.02
EFCAB11-212ENST00000556639 USP8P40818 1118 aa14.92□□□□□ -0.02
EFCAB11-212ENST00000556639 PIK3CAP42336 1068 aa14.92□□□□□ -0.02
EFCAB11-212ENST00000556639 TFAMQ00059 246 aaKnown RBP14.92□□□□□ -0.02
EFCAB11-212ENST00000556639 SLC10A6Q3KNW5 377 aa14.92□□□□□ -0.02
EFCAB11-212ENST00000556639 SSU72P8A0A1W2PR75 194 aa14.91□□□□□ -0.02
EFCAB11-212ENST00000556639 CCP110O43303 1012 aa14.91□□□□□ -0.02
EFCAB11-212ENST00000556639 MCF2P10911 925 aa14.91□□□□□ -0.02
EFCAB11-212ENST00000556639 ENPEPQ07075 957 aa14.91□□□□□ -0.02
EFCAB11-212ENST00000556639 NT5C1BQ96P26 610 aa14.91□□□□□ -0.02
EFCAB11-212ENST00000556639 RPF1Q9H9Y2 349 aaKnown RBP14.91□□□□□ -0.02
EFCAB11-212ENST00000556639 SAGE1Q9NXZ1 904 aa14.91□□□□□ -0.02
EFCAB11-212ENST00000556639 DNAI1Q9UI46 699 aa14.91□□□□□ -0.02
EFCAB11-212ENST00000556639 MYO6Q9UM54 1294 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms