RNA–Protein interactions for RNA: ENST00000556587.5

SRSF5-215, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 1,863 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-215ENST00000556587 DDX39AO00148 427 aaKnown RBP13.72□□□□□ -0.21
SRSF5-215ENST00000556587 PGRMC1O00264 195 aaKnown RBP13.72□□□□□ -0.21
SRSF5-215ENST00000556587 KCNK3O14649 394 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 STAM2O75886 525 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 LMAN1P49257 510 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 VAMP7P51809 220 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 MCCD1P59942 119 aaPredicted RBP13.72□□□□□ -0.21
SRSF5-215ENST00000556587 RHOT2Q8IXI1 618 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 DAW1Q8N136 415 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 RFFLQ8WZ73 363 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 GPRASP2Q96D09 838 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 TRERF1Q96PN7 1200 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 RMDN3Q96TC7 470 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 UPF3AQ9H1J1 476 aaKnown RBP13.72□□□□□ -0.21
SRSF5-215ENST00000556587 STARD7Q9NQZ5 370 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 DMGDHQ9UI17 866 aaKnown RBP13.72□□□□□ -0.21
SRSF5-215ENST00000556587 AMFRQ9UKV5 643 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 TBX21Q9UL17 535 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 NCANO14594 1321 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 DDX3XO00571 662 aaKnown RBP eCLIP13.72□□□□□ -0.216e-21■■■□□ 19.2
SRSF5-215ENST00000556587 RPS6P62753 249 aaKnown RBP13.72□□□□□ -0.21
SRSF5-215ENST00000556587 NKX3-2P78367 333 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 CNTN2Q02246 1040 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 ITGB3BPQ13352 177 aaPredicted RBP13.72□□□□□ -0.21
SRSF5-215ENST00000556587 CUL1Q13616 776 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 MUM1L1Q5H9M0 696 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 SND1Q7KZF4 910 aaKnown RBP eCLIP13.72□□□□□ -0.21
SRSF5-215ENST00000556587 HAUS6Q7Z4H7 955 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 KIFAP3Q92845 792 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 FAM81BQ96LP2 452 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 CDX2Q99626 313 aaPredicted RBP13.72□□□□□ -0.21
SRSF5-215ENST00000556587 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.72□□□□□ -0.215e-9■■□□□ 12.5
SRSF5-215ENST00000556587 A1CFQ9NQ94 594 aaKnown RBP13.72□□□□□ -0.21
SRSF5-215ENST00000556587 PXMP2Q9NR77 195 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 HOMER2Q9NSB8 354 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 COL20A1Q9P218 1284 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 TMEM59LQ9UK28 342 aa13.72□□□□□ -0.21
SRSF5-215ENST00000556587 ANKRD62A6NC57 917 aa13.71□□□□□ -0.21
SRSF5-215ENST00000556587 ZMYND10O75800 440 aa13.71□□□□□ -0.21
SRSF5-215ENST00000556587 HEXIM1O94992 359 aaKnown RBP13.71□□□□□ -0.21
SRSF5-215ENST00000556587 RAG1P15918 1043 aa13.71□□□□□ -0.21
SRSF5-215ENST00000556587 ACTN2P35609 894 aa13.71□□□□□ -0.21
SRSF5-215ENST00000556587 CDK7P50613 346 aa13.71□□□□□ -0.21
SRSF5-215ENST00000556587 NCKAP1LP55160 1127 aa13.71□□□□□ -0.21
SRSF5-215ENST00000556587 GJA9P57773 515 aa13.71□□□□□ -0.21
SRSF5-215ENST00000556587 MRPS9P82933 396 aaKnown RBP13.71□□□□□ -0.21
SRSF5-215ENST00000556587 MAATS1Q7Z4T9 603 aa13.71□□□□□ -0.21
SRSF5-215ENST00000556587 DAAM2Q86T65 1068 aa13.71□□□□□ -0.21
SRSF5-215ENST00000556587 GPIHBP1Q8IV16 184 aa13.71□□□□□ -0.21
SRSF5-215ENST00000556587 CCDC26Q8TAB7 109 aa13.71□□□□□ -0.21
SRSF5-215ENST00000556587 ATP6V0A1Q93050 837 aa13.71□□□□□ -0.21
SRSF5-215ENST00000556587 PDCD2LQ9BRP1 358 aa13.71□□□□□ -0.21
SRSF5-215ENST00000556587 ACAD9Q9H845 621 aa13.71□□□□□ -0.21
SRSF5-215ENST00000556587 TMEM39AQ9NV64 488 aa13.71□□□□□ -0.21
SRSF5-215ENST00000556587 TTC7AQ9ULT0 858 aaPredicted RBP13.71□□□□□ -0.21
SRSF5-215ENST00000556587 ERICH4A6NGS2 130 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 TMCO5BA8MYB1 307 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 RPS6KA5O75582 802 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 SYF2O95926 243 aaKnown RBP13.7□□□□□ -0.22
SRSF5-215ENST00000556587 ASGR1P07306 291 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 C6orf222P0C671 652 aaPredicted RBP13.7□□□□□ -0.22
SRSF5-215ENST00000556587 GTF2H1P32780 548 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 GALCP54803 685 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 HADHBP55084 474 aaKnown RBP13.7□□□□□ -0.22
SRSF5-215ENST00000556587 DMP1Q13316 513 aaPredicted RBP13.7□□□□□ -0.22
SRSF5-215ENST00000556587 TCEAL1Q15170 157 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 CBWD6Q4V339 395 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 CBWD3Q5JTY5 395 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 CBWD5Q5RIA9 395 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.7□□□□□ -0.22
SRSF5-215ENST00000556587 RASGEF1CQ8N431 466 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 MREGQ8N565 214 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 FAM76AQ8TAV0 307 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 MORC4Q8TE76 937 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 MS4A14Q96JA4 679 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 TAAR1Q96RJ0 339 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 SLITRK6Q9H5Y7 841 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 FAM204AQ9H8W3 233 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 POLD4Q9HCU8 107 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 HSPBP1Q9NZL4 362 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 PCDHA10Q9Y5I2 948 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 DCDC2CA8MYV0 355 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 CEP104O60308 925 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 MYCLP12524 364 aaPredicted RBP13.7□□□□□ -0.22
SRSF5-215ENST00000556587 EIF2AK2P19525 551 aaKnown RBP13.7□□□□□ -0.22
SRSF5-215ENST00000556587 GGCXP38435 758 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 FPGSQ05932 587 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 XKR9Q5GH70 373 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 PCSK9Q8NBP7 692 aaKnown RBP13.7□□□□□ -0.22
SRSF5-215ENST00000556587 SCFD2Q8WU76 684 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 SPIRE2Q8WWL2 714 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 RNPC3Q96LT9 517 aaKnown RBP13.7□□□□□ -0.22
SRSF5-215ENST00000556587 GLT1D1Q96MS3 346 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 KRT12Q99456 494 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 EPB41L5Q9HCM4 733 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 RNF146Q9NTX7 359 aa13.7□□□□□ -0.22
SRSF5-215ENST00000556587 XIRP2A4UGR9 3374 aa13.69□□□□□ -0.22
SRSF5-215ENST00000556587 MROH7Q68CQ1 1323 aa13.69□□□□□ -0.22
SRSF5-215ENST00000556587 EMSYQ7Z589 1322 aa13.69□□□□□ -0.22
SRSF5-215ENST00000556587 GOLGA6CA6NDK9 693 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms