RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 ZDHHC9Q9Y397 364 aa8.89□□□□□ -0.99
VTI1B-206ENST00000556461 SMIM28A0A1B0GU29 152 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 CARNS1A5YM72 827 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 TISP43B9A030 160 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 ANKRD63C9JTQ0 380 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 K7ENM7 598 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 TEX28O15482 410 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 TRAK2O60296 914 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 TADA2AO75478 443 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 TOM1L1O75674 476 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 URODP06132 367 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 HSP90AA1P07900 732 aaKnown RBP8.88□□□□□ -0.99
VTI1B-206ENST00000556461 RPL17P18621 184 aaKnown RBP8.88□□□□□ -0.99
VTI1B-206ENST00000556461 SSTR3P32745 418 aaPredicted RBP8.88□□□□□ -0.99
VTI1B-206ENST00000556461 TNFSF9P41273 254 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 CLCN4P51793 760 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 CLCNKBP51801 687 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 SMTNP53814 917 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 DSG1Q02413 1049 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 DNM1Q05193 864 aaKnown RBP8.88□□□□□ -0.99
VTI1B-206ENST00000556461 MCL1Q07820 350 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 STRN3Q13033 797 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 SLC10A6Q3KNW5 377 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 ZC2HC1CQ53FD0 456 aaPredicted RBP8.88□□□□□ -0.99
VTI1B-206ENST00000556461 RARS2Q5T160 578 aaKnown RBP8.88□□□□□ -0.99
VTI1B-206ENST00000556461 AXDND1Q5T1B0 1012 aaPredicted RBP8.88□□□□□ -0.99
VTI1B-206ENST00000556461 SHC4Q6S5L8 630 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 PRSS55Q6UWB4 352 aaPredicted RBP8.88□□□□□ -0.99
VTI1B-206ENST00000556461 SFR1Q86XK3 245 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 ADHFE1Q8IWW8 467 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 PDILTQ8N807 584 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 C3orf58Q8NDZ4 430 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 DDX12PQ92771 950 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 STAMQ92783 540 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 CASP10Q92851 521 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 KCNN1Q92952 543 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 C18orf25Q96B23 403 aaPredicted RBP8.88□□□□□ -0.99
VTI1B-206ENST00000556461 DNAJC19Q96DA6 116 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 SNX27Q96L92 541 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 ZNF396Q96N95 335 aaPredicted RBP8.88□□□□□ -0.99
VTI1B-206ENST00000556461 TCHPQ9BT92 498 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 CCDC94Q9BW85 323 aaPredicted RBP8.88□□□□□ -0.99
VTI1B-206ENST00000556461 FGFBP2Q9BYJ0 223 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 RXFP1Q9HBX9 757 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 MRPL17Q9NRX2 175 aaKnown RBP8.88□□□□□ -0.99
VTI1B-206ENST00000556461 LARSQ9P2J5 1176 aaKnown RBP8.88□□□□□ -0.99
VTI1B-206ENST00000556461 STK17AQ9UEE5 414 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 CCDC39Q9UFE4 941 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 ADAM28Q9UKQ2 775 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 TBX20Q9UMR3 447 aa8.88□□□□□ -0.99
VTI1B-206ENST00000556461 TDRD15B5MCY1 1934 aaKnown RBP8.88□□□□□ -0.99
VTI1B-206ENST00000556461 I3L4J1 428 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 ADAM12O43184 909 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 FAM189A1O60320 539 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 PPP6R2O75170 966 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 TBCAO75347 108 aaKnown RBP8.87□□□□□ -0.99
VTI1B-206ENST00000556461 NR1I2O75469 434 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 YEATS4O95619 227 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 PIGRP01833 764 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 CXCL8P10145 99 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 KLRC2P26717 231 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 STAT6P42226 847 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 GLUD2P49448 558 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 GTF2BQ00403 316 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 SPAG1Q07617 926 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 KCNA1Q09470 495 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 BMS1Q14692 1282 aaKnown RBP8.87□□□□□ -0.99
VTI1B-206ENST00000556461 NOLC1Q14978 699 aaKnown RBP eCLIP8.87□□□□□ -0.99
VTI1B-206ENST00000556461 E2F4Q16254 413 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 UPP1Q16831 310 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 ZPBP2Q6X784 338 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 CCDC73Q6ZRK6 1079 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 SV2BQ7L1I2 683 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 GLYCTKQ8IVS8 523 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 RIN2Q8WYP3 895 aaPredicted RBP8.87□□□□□ -0.99
VTI1B-206ENST00000556461 BICD1Q96G01 975 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 FBXL18Q96ME1 805 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 ACAP3Q96P50 834 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 EMILIN2Q9BXX0 1053 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 TBC1D7Q9P0N9 293 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 CNTN3Q9P232 1028 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 PRKAG3Q9UGI9 489 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 FAM50BQ9Y247 325 aa8.87□□□□□ -0.99
VTI1B-206ENST00000556461 FSD2A1L4K1 749 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 FRMD3A2A2Y4 597 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 FAM86C2PA6NEL3 165 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 LOC730098B7Z3J9 87 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 CLDN3O15551 220 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 CUTAO60888 179 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 PPP1R37O75864 691 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 SPATA31D3P0C874 917 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 SRGAP2BP0DMP2 458 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 KCNE1P15382 129 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 HOXB8P17481 243 aaPredicted RBP8.86□□□□□ -0.99
VTI1B-206ENST00000556461 SP100P23497 879 aaPredicted RBP8.86□□□□□ -0.99
VTI1B-206ENST00000556461 TXLNAP40222 546 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 MATR3P43243 847 aaKnown RBP eCLIP8.86□□□□□ -0.99
VTI1B-206ENST00000556461 BRCC3P46736 316 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 LIG4P49917 911 aa8.86□□□□□ -0.99
VTI1B-206ENST00000556461 GUCY2FP51841 1108 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms