RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 PARVAQ9NVD7 372 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 SUGT1Q9Y2Z0 365 aa15.94■□□□□ 0.14
ARHGEF40-207ENST00000556399 PIK3C2AO00443 1686 aa15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 NT5DC3Q86UY8 548 aa15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 DTX3LQ8TDB6 740 aa15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 ZNF341Q9BYN7 854 aa15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 OSBPL8Q9BZF1 889 aa15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 CDC42EP4Q9H3Q1 356 aaKnown RBP15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 SMYD3Q9H7B4 428 aa15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 KRT38O76015 456 aa15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 YWHABP31946 246 aaKnown RBP15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 KRT76Q01546 638 aa15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 KCNMA1Q12791 1236 aa15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 CDO1Q16878 200 aa15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 CNKSR1Q969H4 720 aa15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 PCSK1NQ9UHG2 260 aa15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 GTF3C4Q9UKN8 822 aa15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 HNRNPCL1O60812 293 aaKnown RBP15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 KLC1Q07866 573 aa15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 DBN1Q16643 649 aa15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 EIF1ADQ8N9N8 165 aaKnown RBP15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 ZKSCAN4Q969J2 545 aaPredicted RBP15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 DDX3XO00571 662 aaKnown RBP eCLIP15.93■□□□□ 0.149e-7■□□□□ 9.4
ARHGEF40-207ENST00000556399 TBXAS1P24557 533 aaPredicted RBP15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 PODNQ7Z5L7 613 aa15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 ATG4AQ8WYN0 398 aa15.93■□□□□ 0.14
ARHGEF40-207ENST00000556399 P4HA2O15460 535 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 PFDN1O60925 122 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 CDC42EP5Q6NZY7 148 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 C3orf67Q6ZVT6 689 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 ATP8B4Q8TF62 1192 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 KLC2Q9H0B6 622 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 NDE1Q9NXR1 346 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 PSMC3IPQ9P2W1 217 aaPredicted RBP15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 FEM1BQ9UK73 627 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 SLIT3O75094 1523 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 SYNJ2BP-COX16A0A087WUM0 186 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 SGPL1O95470 568 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 TARSP26639 723 aaKnown RBP15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 PGM1P36871 562 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 PSMC6P62333 389 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 IFI35P80217 286 aaPredicted RBP15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 EPC2Q52LR7 807 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 LRRC23Q53EV4 343 aaPredicted RBP15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 APTXQ7Z2E3 356 aaKnown RBP15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 SH3GL3Q99963 347 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 COX16Q9P0S2 106 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 WTIPA6NIX2 430 aaPredicted RBP15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 ZNF263O14978 683 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 GMNNO75496 209 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 MYCNP04198 464 aaPredicted RBP15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 AP2B1P63010 937 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 C4orf32Q8N8J7 132 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 CEP120Q8N960 986 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 GABPB2Q8TAK5 448 aaPredicted RBP15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 DNAJC9Q8WXX5 260 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 MTMR9Q96QG7 549 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 RTFDC1Q9BY42 306 aaPredicted RBP15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 RAVER2Q9HCJ3 691 aaKnown RBP15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 DDX56Q9NY93 547 aaKnown RBP15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 SLC9A2Q9UBY0 812 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 CCDC22O60826 627 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 ERFP50548 548 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 SLC20A1Q8WUM9 679 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 G3BP2Q9UN86 482 aaKnown RBP15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 TRAF3IP3Q9Y228 551 aa15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 APOBEC2Q9Y235 224 aaKnown RBP15.92■□□□□ 0.14
ARHGEF40-207ENST00000556399 GTPBP10A4D1E9 387 aaKnown RBP15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 RALAP11233 206 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 PPP2R5CQ13362 524 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 LDHDQ86WU2 507 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 RCOR2Q8IZ40 523 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 RIBC1Q8N443 379 aaPredicted RBP15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 KCTD17Q8N5Z5 321 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 TEX9Q8N6V9 391 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 DDX27Q96GQ7 796 aaKnown RBP15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 SLC13A1Q9BZW2 595 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 SMYD2Q9NRG4 433 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 GABBR1Q9UBS5 961 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 PRR12Q9ULL5 1215 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 KRT7P08729 469 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 MARK3P27448 753 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 SFNP31947 248 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 RAPH1Q70E73 1250 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 NLRP7Q8WX94 980 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 CCT6BQ92526 530 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 ADPGKQ9BRR6 497 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 TSSK1BQ9BXA7 367 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 FOXP3Q9BZS1 431 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 CNOT7Q9UIV1 285 aaKnown RBP15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 TRPA1O75762 1119 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 EPHB1P54762 984 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 CENPCQ03188 943 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 MMEL1Q495T6 779 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 IQCKQ8N0W5 287 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 FGD4Q96M96 766 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 STRIP2Q9ULQ0 834 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 AGPSO00116 658 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 NVLO15381 856 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms