RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 PDXDC1Q6P996 788 aa20.73■□□□□ 0.91
CDKN3-209ENST00000556102 GET4Q7L5D6 327 aaPredicted RBP20.73■□□□□ 0.91
CDKN3-209ENST00000556102 CEP57Q86XR8 500 aa20.73■□□□□ 0.91
CDKN3-209ENST00000556102 LNX1Q8TBB1 728 aaPredicted RBP20.73■□□□□ 0.91
CDKN3-209ENST00000556102 RTP3Q9BQQ7 232 aa20.73■□□□□ 0.91
CDKN3-209ENST00000556102 CLSTN3Q9BQT9 956 aa20.73■□□□□ 0.91
CDKN3-209ENST00000556102 POLD4Q9HCU8 107 aa20.73■□□□□ 0.91
CDKN3-209ENST00000556102 WNT16Q9UBV4 365 aa20.73■□□□□ 0.91
CDKN3-209ENST00000556102 KIAA1024Q9UPX6 916 aa20.73■□□□□ 0.91
CDKN3-209ENST00000556102 GDAQ9Y2T3 454 aa20.73■□□□□ 0.91
CDKN3-209ENST00000556102 STK24Q9Y6E0 443 aa20.73■□□□□ 0.91
CDKN3-209ENST00000556102 PTPRZ1P23471 2315 aaPredicted RBP20.72■□□□□ 0.91
CDKN3-209ENST00000556102 LAMP2P13473 410 aa20.72■□□□□ 0.91
CDKN3-209ENST00000556102 U2AF2P26368 475 aaKnown RBP eCLIP20.72■□□□□ 0.91
CDKN3-209ENST00000556102 NBL1P41271 181 aa20.72■□□□□ 0.91
CDKN3-209ENST00000556102 PDIA5Q14554 519 aa20.72■□□□□ 0.91
CDKN3-209ENST00000556102 NT5DC1Q5TFE4 455 aa20.72■□□□□ 0.91
CDKN3-209ENST00000556102 LIN9Q5TKA1 542 aa20.72■□□□□ 0.91
CDKN3-209ENST00000556102 ATF7IP2Q5U623 682 aa20.72■□□□□ 0.91
CDKN3-209ENST00000556102 APBB1IPQ7Z5R6 666 aaPredicted RBP20.72■□□□□ 0.91
CDKN3-209ENST00000556102 SLC44A3Q8N4M1 653 aa20.72■□□□□ 0.91
CDKN3-209ENST00000556102 RAB34Q9BZG1 259 aa20.72■□□□□ 0.91
CDKN3-209ENST00000556102 DDX19AQ9NUU7 478 aaKnown RBP20.72■□□□□ 0.91
CDKN3-209ENST00000556102 TMEM189-UBE2V1I3L0A0 370 aa20.71■□□□□ 0.91
CDKN3-209ENST00000556102 PI15O43692 258 aa20.71■□□□□ 0.91
CDKN3-209ENST00000556102 CFHP08603 1231 aa20.71■□□□□ 0.91
CDKN3-209ENST00000556102 HNRNPA1P09651 372 aaKnown RBP eCLIP20.71■□□□□ 0.91
CDKN3-209ENST00000556102 SRFP11831 508 aa20.71■□□□□ 0.91
CDKN3-209ENST00000556102 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.71■□□□□ 0.91
CDKN3-209ENST00000556102 CCDC105Q8IYK2 499 aa20.71■□□□□ 0.91
CDKN3-209ENST00000556102 IGSF22Q8N9C0 903 aa20.71■□□□□ 0.91
CDKN3-209ENST00000556102 SNX29Q8TEQ0 813 aa20.71■□□□□ 0.91
CDKN3-209ENST00000556102 PPP1R10Q96QC0 940 aaKnown RBP20.71■□□□□ 0.91
CDKN3-209ENST00000556102 RIF1Q5UIP0 2472 aaKnown RBP20.71■□□□□ 0.91
CDKN3-209ENST00000556102 FAM186AA6NE01 2351 aa20.7■□□□□ 0.9
CDKN3-209ENST00000556102 MYO15AQ9UKN7 3530 aa20.7■□□□□ 0.9
CDKN3-209ENST00000556102 K7ERI5 159 aa20.7■□□□□ 0.9
CDKN3-209ENST00000556102 C8AP07357 584 aa20.7■□□□□ 0.9
CDKN3-209ENST00000556102 HOXA9P31269 272 aa20.7■□□□□ 0.9
CDKN3-209ENST00000556102 PTGDRQ13258 359 aa20.7■□□□□ 0.9
CDKN3-209ENST00000556102 KIF2CQ99661 725 aa20.7■□□□□ 0.9
CDKN3-209ENST00000556102 TNFSF13BQ9Y275 285 aa20.7■□□□□ 0.9
CDKN3-209ENST00000556102 ZFP37Q9Y6Q3 630 aaPredicted RBP20.7■□□□□ 0.9
CDKN3-209ENST00000556102 PHLPP2Q6ZVD8 1323 aa20.7■□□□□ 0.9
CDKN3-209ENST00000556102 CFAP54Q96N23 3096 aa20.69■□□□□ 0.9
CDKN3-209ENST00000556102 KRBA1A5PL33 1030 aa20.69■□□□□ 0.9
CDKN3-209ENST00000556102 ANHXE9PGG2 379 aa20.69■□□□□ 0.9
CDKN3-209ENST00000556102 FGFR3P22607 806 aa20.69■□□□□ 0.9
CDKN3-209ENST00000556102 FSHRP23945 695 aa20.69■□□□□ 0.9
CDKN3-209ENST00000556102 TOB1P50616 345 aaPredicted RBP20.69■□□□□ 0.9
CDKN3-209ENST00000556102 HTR4Q13639 388 aa20.69■□□□□ 0.9
CDKN3-209ENST00000556102 GLRA4Q5JXX5 417 aa20.69■□□□□ 0.9
CDKN3-209ENST00000556102 PPM1LQ5SGD2 360 aa20.69■□□□□ 0.9
CDKN3-209ENST00000556102 DCLRE1AQ6PJP8 1040 aa20.69■□□□□ 0.9
CDKN3-209ENST00000556102 GRASPQ7Z6J2 395 aaPredicted RBP20.69■□□□□ 0.9
CDKN3-209ENST00000556102 UROC1Q96N76 676 aa20.69■□□□□ 0.9
CDKN3-209ENST00000556102 DNM3Q9UQ16 869 aa20.69■□□□□ 0.9
CDKN3-209ENST00000556102 PCDHB6Q9Y5E3 794 aa20.69■□□□□ 0.9
CDKN3-209ENST00000556102 CITO14578 2027 aa20.69■□□□□ 0.9
CDKN3-209ENST00000556102 LAD1O00515 517 aa20.68■□□□□ 0.9
CDKN3-209ENST00000556102 ADAM12O43184 909 aa20.68■□□□□ 0.9
CDKN3-209ENST00000556102 B3GAT3O94766 335 aa20.68■□□□□ 0.9
CDKN3-209ENST00000556102 GRM5P41594 1212 aa20.68■□□□□ 0.9
CDKN3-209ENST00000556102 NPTX2P47972 431 aa20.68■□□□□ 0.9
CDKN3-209ENST00000556102 PEX3P56589 373 aa20.68■□□□□ 0.9
CDKN3-209ENST00000556102 RAB33AQ14088 237 aa20.68■□□□□ 0.9
CDKN3-209ENST00000556102 KRT79Q5XKE5 535 aa20.68■□□□□ 0.9
CDKN3-209ENST00000556102 ASCL5Q7RTU5 278 aa20.68■□□□□ 0.9
CDKN3-209ENST00000556102 DTWD2Q8NBA8 298 aa20.68■□□□□ 0.9
CDKN3-209ENST00000556102 MTRRQ9UBK8 725 aa20.68■□□□□ 0.9
CDKN3-209ENST00000556102 CA14Q9ULX7 337 aa20.68■□□□□ 0.9
CDKN3-209ENST00000556102 MYH15Q9Y2K3 1946 aa20.68■□□□□ 0.9
CDKN3-209ENST00000556102 VPS13AQ96RL7 3174 aa20.67■□□□□ 0.9
CDKN3-209ENST00000556102 MYH11P35749 1972 aa20.67■□□□□ 0.9
CDKN3-209ENST00000556102 PRR23AA6NEV1 266 aa20.67■□□□□ 0.9
CDKN3-209ENST00000556102 CCDC169A6NNP5 214 aa20.67■□□□□ 0.9
CDKN3-209ENST00000556102 E9PMD0 336 aa20.67■□□□□ 0.9
CDKN3-209ENST00000556102 STK25O00506 426 aa20.67■□□□□ 0.9
CDKN3-209ENST00000556102 XYLBO75191 536 aa20.67■□□□□ 0.9
CDKN3-209ENST00000556102 POU2F2P09086 479 aa20.67■□□□□ 0.9
CDKN3-209ENST00000556102 RFX1P22670 979 aa20.67■□□□□ 0.9
CDKN3-209ENST00000556102 PRPHP41219 470 aa20.67■□□□□ 0.9
CDKN3-209ENST00000556102 CLCNKBP51801 687 aa20.67■□□□□ 0.9
CDKN3-209ENST00000556102 DMP1Q13316 513 aaPredicted RBP20.67■□□□□ 0.9
CDKN3-209ENST00000556102 DAW1Q8N136 415 aa20.67■□□□□ 0.9
CDKN3-209ENST00000556102 GPR152Q8TDT2 470 aa20.67■□□□□ 0.9
CDKN3-209ENST00000556102 ACO2Q99798 780 aaKnown RBP20.67■□□□□ 0.9
CDKN3-209ENST00000556102 CCDC94Q9BW85 323 aaPredicted RBP20.67■□□□□ 0.9
CDKN3-209ENST00000556102 CDT1Q9H211 546 aa20.67■□□□□ 0.9
CDKN3-209ENST00000556102 TMEM134Q9H6X4 195 aa20.67■□□□□ 0.9
CDKN3-209ENST00000556102 TOPORSQ9NS56 1045 aaPredicted RBP20.67■□□□□ 0.9
CDKN3-209ENST00000556102 CDH7Q9ULB5 785 aa20.67■□□□□ 0.9
CDKN3-209ENST00000556102 NUMBLQ9Y6R0 609 aa20.67■□□□□ 0.9
CDKN3-209ENST00000556102 SMIM28A0A1B0GU29 152 aa20.66■□□□□ 0.9
CDKN3-209ENST00000556102 PP2D1A8MPX8 630 aa20.66■□□□□ 0.9
CDKN3-209ENST00000556102 CCL16O15467 120 aa20.66■□□□□ 0.9
CDKN3-209ENST00000556102 TRAPPC3O43617 180 aa20.66■□□□□ 0.9
CDKN3-209ENST00000556102 HIP1RO75146 1068 aa20.66■□□□□ 0.9
CDKN3-209ENST00000556102 OR1D2P34982 312 aa20.66■□□□□ 0.9
CDKN3-209ENST00000556102 YARSP54577 528 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms