RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 ANKRD40Q6AI12 368 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 CENPPQ6IPU0 288 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 TTI2Q6NXR4 508 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 MIER3Q7Z3K6 550 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 PLEKHH3Q7Z736 793 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 ZNF605Q86T29 641 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 TPH2Q8IWU9 490 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 TMEM105Q8N8V8 129 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 CHST13Q8NET6 341 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 REPS2Q8NFH8 660 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 NPLOC4Q8TAT6 608 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 NSUN6Q8TEA1 469 aaKnown RBP7.49□□□□□ -1.21
SLIRP-204ENST00000555890 EDEM1Q92611 657 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 CRELD1Q96HD1 420 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 DYDC2Q96IM9 177 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 RIPOR3Q96MK2 946 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 APBA2Q99767 749 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 HSD17B14Q9BPX1 270 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 PDCD2LQ9BRP1 358 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 ZHX3Q9H4I2 956 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 CLMPQ9H6B4 373 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 PXMP2Q9NR77 195 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 RAB6BQ9NRW1 208 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 KCNH7Q9NS40 1196 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 COL20A1Q9P218 1284 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 ADD3Q9UEY8 706 aaKnown RBP7.49□□□□□ -1.21
SLIRP-204ENST00000555890 ZNF214Q9UL59 606 aaPredicted RBP7.49□□□□□ -1.21
SLIRP-204ENST00000555890 PYCARDQ9ULZ3 195 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.49□□□□□ -1.21
SLIRP-204ENST00000555890 AK5Q9Y6K8 562 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 KIAA1217Q5T5P2 1943 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 TRIM49BA6NDI0 452 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 B4DLN1 442 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 J3QKU1 62 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 EML1O00423 815 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 COBLO75128 1261 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 TBCAO75347 108 aaKnown RBP7.48□□□□□ -1.21
SLIRP-204ENST00000555890 ADH1CP00326 375 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 PDGFBP01127 241 aaPredicted RBP7.48□□□□□ -1.21
SLIRP-204ENST00000555890 PDGFAP04085 211 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 NR3C2P08235 984 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 CYBAP13498 195 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 ITGB5P18084 799 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 MAPK4P31152 587 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 SFNP31947 248 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 CYP2C19P33261 490 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 COPB2P35606 906 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 MTIF2P46199 727 aaKnown RBP7.48□□□□□ -1.21
SLIRP-204ENST00000555890 KCNJ6P48051 423 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 RPIAP49247 311 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 DNM2P50570 870 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 JAK3P52333 1124 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 PSMC6P62333 389 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 HERVK_113P62684 666 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 ERVK-24P63145 666 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 IRX3P78415 501 aaPredicted RBP7.48□□□□□ -1.21
SLIRP-204ENST00000555890 KRT76Q01546 638 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 CYP4A11Q02928 519 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 TBX2Q13207 712 aaPredicted RBP7.48□□□□□ -1.21
SLIRP-204ENST00000555890 TRIM14Q14142 442 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 GIT2Q14161 759 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 CTTNQ14247 550 aaKnown RBP7.48□□□□□ -1.21
SLIRP-204ENST00000555890 MFSD5Q6N075 450 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 ARMCX5Q6P1M9 558 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 TREML4Q6UXN2 200 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 SLC30A10Q6XR72 485 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 NOP9Q86U38 636 aaKnown RBP7.48□□□□□ -1.21
SLIRP-204ENST00000555890 VSIG10LQ86VR7 867 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 ALDH16A1Q8IZ83 802 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 KIAA0895Q8NCT3 520 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 GPRASP2Q96D09 838 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 CDHR1Q96JP9 859 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 IWS1Q96ST2 819 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 VPS16Q9H269 839 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 BHMT2Q9H2M3 363 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 ACBD3Q9H3P7 528 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 UNC45AQ9H3U1 944 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 AGO4Q9HCK5 861 aaKnown RBP7.48□□□□□ -1.21
SLIRP-204ENST00000555890 SPTLC3Q9NUV7 552 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 PGPEP1Q9NXJ5 209 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 RGL1Q9NZL6 768 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 KCND2Q9NZV8 630 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 RIPK3Q9Y572 518 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 COL4A3BPQ9Y5P4 624 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 ITIH6Q6UXX5 1313 aa7.48□□□□□ -1.21
SLIRP-204ENST00000555890 WDR81Q562E7 1941 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 A0A1B0GTL3 188 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 A0A1W2PQC6 194 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 FRMD3A2A2Y4 597 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 ARHGEF35A5YM69 484 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 AKR1B15C9JRZ8 316 aaPredicted RBP7.47□□□□□ -1.21
SLIRP-204ENST00000555890 MSCO60682 206 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 LPXNO60711 386 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 DKC1O60832 514 aaKnown RBP eCLIP7.47□□□□□ -1.21
SLIRP-204ENST00000555890 GNA14O95837 355 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 TIMP1P01033 207 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 IL2RAP01589 272 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 CA3P07451 260 aa7.47□□□□□ -1.21
SLIRP-204ENST00000555890 PMS1P54277 932 aaKnown RBP7.47□□□□□ -1.21
SLIRP-204ENST00000555890 MRPS9P82933 396 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms